| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399874
Identifier: 150399874
GI number: 150399874
Start: 1139493
End: 1140167
Strand: Reverse
Name: 150399874
Synonym: Mevan_1129
Alternate gene names: NA
Gene position: 1140167-1139493 (Counterclockwise)
Preceding gene: 150399875
Following gene: 150399872
Centisome position: 66.29
GC content: 30.96
Gene sequence:
>675_bases ATGAACTGGAAAGGACATATAACTCTTGGAATAATAATGGGTCTTCCATTTATTTCATCCCCTGAACAAATTTTTCTAGT GGTTGCGGGAGCACTTTATCCAGATTTAGACCATGATGTAAAGTCAGAAATCGTAGAGCGGGGATTATATATTTCTGGAG GCCTTATTTTAATTTCTATTTTAGCATATTTATTTAGGCCAGAATATTTTAATGTTGGGTTTTTTATTGCATCCGTTTTT GGCGGTTTAATCTATATAATACCATATTATGCAAAACATAGAGAAATTACCCATACATTTTTAAGTTTAGTATTTAGTTC AATAATTTTAGGCTATTTAACATTTAAATTGTCAGTAATATCCCCAATAATGGCTTCGCTGATTGCACTTATAATGGTTA CAAACAATAACCTTCTTGGAAAAGCCGTTTCAATTTCAGTTTTTGCATGGGTACTTTATAGCTTAATTTCAAAGTCGATT ATAGCATTTCAGGGGTTAGAATATTTTATAATTCCAATCGCTATTGGGTATTTATCACATCTTATTGGAGATTGCATGAC TCCAAAGGGGTGTAAATTAATGTATCCTTCAAAACATATTTTTCGAAAAAAAGAAGGTTTTTTTGGCATAGTAATCTGGC TTACTTTAGTCTTTTACGTAATAAAAATCATGTGA
Upstream 100 bases:
>100_bases CACAATGATTCCAGAAATAGCATTAAGAATAAAAAACAAATTTAACGCAATAAGCCTAATTTAACTGCCATAAGAGGCAG TAGCTTCTTTTGGTGATAAA
Downstream 100 bases:
>100_bases CTAAGTTAAAAAATATAAACATATGATATTTAATAACAGACTAAATCTATTTTATTTAATTTTTACAATATTTGCTGCTT TTTTTGCCGTATCTCGTGCA
Product: membrane-bound metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNWKGHITLGIIMGLPFISSPEQIFLVVAGALYPDLDHDVKSEIVERGLYISGGLILISILAYLFRPEYFNVGFFIASVF GGLIYIIPYYAKHREITHTFLSLVFSSIILGYLTFKLSVISPIMASLIALIMVTNNNLLGKAVSISVFAWVLYSLISKSI IAFQGLEYFIIPIAIGYLSHLIGDCMTPKGCKLMYPSKHIFRKKEGFFGIVIWLTLVFYVIKIM
Sequences:
>Translated_224_residues MNWKGHITLGIIMGLPFISSPEQIFLVVAGALYPDLDHDVKSEIVERGLYISGGLILISILAYLFRPEYFNVGFFIASVF GGLIYIIPYYAKHREITHTFLSLVFSSIILGYLTFKLSVISPIMASLIALIMVTNNNLLGKAVSISVFAWVLYSLISKSI IAFQGLEYFIIPIAIGYLSHLIGDCMTPKGCKLMYPSKHIFRKKEGFFGIVIWLTLVFYVIKIM >Mature_224_residues MNWKGHITLGIIMGLPFISSPEQIFLVVAGALYPDLDHDVKSEIVERGLYISGGLILISILAYLFRPEYFNVGFFIASVF GGLIYIIPYYAKHREITHTFLSLVFSSIILGYLTFKLSVISPIMASLIALIMVTNNNLLGKAVSISVFAWVLYSLISKSI IAFQGLEYFIIPIAIGYLSHLIGDCMTPKGCKLMYPSKHIFRKKEGFFGIVIWLTLVFYVIKIM
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007404 [H]
Pfam domain/function: PF04307 DUF457 [H]
EC number: NA
Molecular weight: Translated: 25163; Mature: 25163
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWKGHITLGIIMGLPFISSPEQIFLVVAGALYPDLDHDVKSEIVERGLYISGGLILISI CCCCCEEEHHHHHCCCCCCCCHHEEEEEHHHHCCCCCHHHHHHHHHCCCEEECHHHHHHH LAYLFRPEYFNVGFFIASVFGGLIYIIPYYAKHREITHTFLSLVFSSIILGYLTFKLSVI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPIMASLIALIMVTNNNLLGKAVSISVFAWVLYSLISKSIIAFQGLEYFIIPIAIGYLSH HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LIGDCMTPKGCKLMYPSKHIFRKKEGFFGIVIWLTLVFYVIKIM HHHHCCCCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNWKGHITLGIIMGLPFISSPEQIFLVVAGALYPDLDHDVKSEIVERGLYISGGLILISI CCCCCEEEHHHHHCCCCCCCCHHEEEEEHHHHCCCCCHHHHHHHHHCCCEEECHHHHHHH LAYLFRPEYFNVGFFIASVFGGLIYIIPYYAKHREITHTFLSLVFSSIILGYLTFKLSVI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPIMASLIALIMVTNNNLLGKAVSISVFAWVLYSLISKSIIAFQGLEYFIIPIAIGYLSH HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LIGDCMTPKGCKLMYPSKHIFRKKEGFFGIVIWLTLVFYVIKIM HHHHCCCCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]