| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is hemA
Identifier: 150399845
GI number: 150399845
Start: 1114572
End: 1115711
Strand: Reverse
Name: hemA
Synonym: Mevan_1100
Alternate gene names: 150399845
Gene position: 1115711-1114572 (Counterclockwise)
Preceding gene: 150399846
Following gene: 150399844
Centisome position: 64.87
GC content: 29.82
Gene sequence:
>1140_bases ATGTTGGTTATTAAAGCAGATTATAAAAAATATCCATTACCGGTTCTTGAAAGCATGCGAATTAATGAAGATGAATTTTA CGGTAAGTACGATGCTTGCATAATTGTTCAAACTTGTAACCGGATAGAAGCATATTTTGACGAAGAAATAAATGATATTG AAAAAATAATACCTGATTTCAAGGGTTTTGACGTAATTAAGGGAAAAAAGGCAACATTACATTTTTTAAATGTTGCTTGT GGAATGGATTCAATGATTCTTGGTGAAAACCAAATTTTAGGGCAGATAAAATCAAGTTACCATAAATCTAAAGAACTTAA AAAAACATCTAAATACCTTGAAAATCTTTTTTTAAAGGCAATACATGTTGGACAGCGCGTAAGGGCCGAAACTAAGATTA ATGAAGGAGGTGTTTCAATAGGGAGTGCAGCTGTTGAGCTTGCAGAAATGAAACTTGGCCTTAAAAATAGAAACGTTCTT TTAATTGGTGCTGGAGAAATTGGAACCCTTGTTGCAAAGGCACTAATTGAAAAACATATAAAAGCAGTAATTGTTGCAAA TAGAACGTATGAAAGAGCAGAAACACTTGCAAAAGAGTTAAAAGGAATGGCTGTTCATTTTGACAAATTAAAGGAAGCTA TTAATTTTAGCGATGTTATAATCTGTGCTACGTCATCTCCGCATTATATACTTGAAAAAAGCGACCTTTTAGATGTTGGT AACAAAATAATTATAGATATTGCAAACCCTCGTGATGTAGATGATTCAGTTAGAGAGCTTGAAAATATATCCCTTTACAC AATTGATGATTTAAGAAATATTTCTGATAAAAATTTACAAAAAAGGCTTAAAGAAGTCCCAATTGTTGAAAATATAATTG AAGAAGAATATGGTATACTGTTAAAACAGATTGAAAAAACTAATGTTGAAGAAGTAATAAAAGATTTTAATACATATATT GAGGACGTTAGAAAAAAAGAACTTGAAAAAGCAGTTAGATTATGTAAAAATAAAAGTCCTGATGAAATAATGGAAAATTT TTCTAAAGCATTTGTAAAACGTATAACTCATGATTTTGTTTCTTATTCATTAAGTGTTTCAAAAGAAGACCTTTTAAACT CCATATGGTGGAAAAAATAA
Upstream 100 bases:
>100_bases AAAGACCAAGAATTACGTAAAAAAATTCTTGAAAAGGTATTTTCTAATAAACAGTTTAAGCTGGAATTTTTAGAACTGAT TGAAAAACATAGGTGAATCT
Downstream 100 bases:
>100_bases GTTTTATACCGTATAATTAAGCGGTATGATTAGATTATATAATTTAAGTCAAGTTCCATAATTACTAAGCGAAATTTTGG TGGAAAAATGGTAAATATAG
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MLVIKADYKKYPLPVLESMRINEDEFYGKYDACIIVQTCNRIEAYFDEEINDIEKIIPDFKGFDVIKGKKATLHFLNVAC GMDSMILGENQILGQIKSSYHKSKELKKTSKYLENLFLKAIHVGQRVRAETKINEGGVSIGSAAVELAEMKLGLKNRNVL LIGAGEIGTLVAKALIEKHIKAVIVANRTYERAETLAKELKGMAVHFDKLKEAINFSDVIICATSSPHYILEKSDLLDVG NKIIIDIANPRDVDDSVRELENISLYTIDDLRNISDKNLQKRLKEVPIVENIIEEEYGILLKQIEKTNVEEVIKDFNTYI EDVRKKELEKAVRLCKNKSPDEIMENFSKAFVKRITHDFVSYSLSVSKEDLLNSIWWKK
Sequences:
>Translated_379_residues MLVIKADYKKYPLPVLESMRINEDEFYGKYDACIIVQTCNRIEAYFDEEINDIEKIIPDFKGFDVIKGKKATLHFLNVAC GMDSMILGENQILGQIKSSYHKSKELKKTSKYLENLFLKAIHVGQRVRAETKINEGGVSIGSAAVELAEMKLGLKNRNVL LIGAGEIGTLVAKALIEKHIKAVIVANRTYERAETLAKELKGMAVHFDKLKEAINFSDVIICATSSPHYILEKSDLLDVG NKIIIDIANPRDVDDSVRELENISLYTIDDLRNISDKNLQKRLKEVPIVENIIEEEYGILLKQIEKTNVEEVIKDFNTYI EDVRKKELEKAVRLCKNKSPDEIMENFSKAFVKRITHDFVSYSLSVSKEDLLNSIWWKK >Mature_379_residues MLVIKADYKKYPLPVLESMRINEDEFYGKYDACIIVQTCNRIEAYFDEEINDIEKIIPDFKGFDVIKGKKATLHFLNVAC GMDSMILGENQILGQIKSSYHKSKELKKTSKYLENLFLKAIHVGQRVRAETKINEGGVSIGSAAVELAEMKLGLKNRNVL LIGAGEIGTLVAKALIEKHIKAVIVANRTYERAETLAKELKGMAVHFDKLKEAINFSDVIICATSSPHYILEKSDLLDVG NKIIIDIANPRDVDDSVRELENISLYTIDDLRNISDKNLQKRLKEVPIVENIIEEEYGILLKQIEKTNVEEVIKDFNTYI EDVRKKELEKAVRLCKNKSPDEIMENFSKAFVKRITHDFVSYSLSVSKEDLLNSIWWKK
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family
Homologues:
Organism=Escherichia coli, GI1787461, Length=388, Percent_Identity=30.6701030927835, Blast_Score=164, Evalue=6e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEM1_METVS (A6UR78)
Other databases:
- EMBL: CP000742 - RefSeq: YP_001323612.1 - ProteinModelPortal: A6UR78 - SMR: A6UR78 - STRING: A6UR78 - GeneID: 5324539 - GenomeReviews: CP000742_GR - KEGG: mvn:Mevan_1100 - eggNOG: arNOG04783 - HOGENOM: HBG732626 - OMA: IVANRTY - ProtClustDB: PRK00045 - GO: GO:0005737 - HAMAP: MF_00087 - InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 - Gene3D: G3DSA:1.10.1200.70 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000445 - TIGRFAMs: TIGR01035
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH; SSF69075 4pyrrol_synth_GluRdtase_C; SSF69742 GlutR
EC number: =1.2.1.70
Molecular weight: Translated: 43234; Mature: 43234
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00747 GLUTR
Important sites: ACT_SITE 39-39 BINDING 84-84 BINDING 95-95
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIKADYKKYPLPVLESMRINEDEFYGKYDACIIVQTCNRIEAYFDEEINDIEKIIPDF CEEEECCCCCCCCCHHHHCCCCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCC KGFDVIKGKKATLHFLNVACGMDSMILGENQILGQIKSSYHKSKELKKTSKYLENLFLKA CCCCCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHVGQRVRAETKINEGGVSIGSAAVELAEMKLGLKNRNVLLIGAGEIGTLVAKALIEKHI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH KAVIVANRTYERAETLAKELKGMAVHFDKLKEAINFSDVIICATSSPHYILEKSDLLDVG HEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCHHHHHCC NKIIIDIANPRDVDDSVRELENISLYTIDDLRNISDKNLQKRLKEVPIVENIIEEEYGIL CEEEEEECCCCCCCHHHHHHHCCCEEEEHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH LKQIEKTNVEEVIKDFNTYIEDVRKKELEKAVRLCKNKSPDEIMENFSKAFVKRITHDFV HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SYSLSVSKEDLLNSIWWKK HHHHCCCHHHHHHHHCCCC >Mature Secondary Structure MLVIKADYKKYPLPVLESMRINEDEFYGKYDACIIVQTCNRIEAYFDEEINDIEKIIPDF CEEEECCCCCCCCCHHHHCCCCCHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCC KGFDVIKGKKATLHFLNVACGMDSMILGENQILGQIKSSYHKSKELKKTSKYLENLFLKA CCCCCCCCCCHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHVGQRVRAETKINEGGVSIGSAAVELAEMKLGLKNRNVLLIGAGEIGTLVAKALIEKHI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHH KAVIVANRTYERAETLAKELKGMAVHFDKLKEAINFSDVIICATSSPHYILEKSDLLDVG HEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCHHHHHCC NKIIIDIANPRDVDDSVRELENISLYTIDDLRNISDKNLQKRLKEVPIVENIIEEEYGIL CEEEEEECCCCCCCHHHHHHHCCCEEEEHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH LKQIEKTNVEEVIKDFNTYIEDVRKKELEKAVRLCKNKSPDEIMENFSKAFVKRITHDFV HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH SYSLSVSKEDLLNSIWWKK HHHHCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA