| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399634
Identifier: 150399634
GI number: 150399634
Start: 905297
End: 906250
Strand: Reverse
Name: 150399634
Synonym: Mevan_0884
Alternate gene names: NA
Gene position: 906250-905297 (Counterclockwise)
Preceding gene: 150399635
Following gene: 150399633
Centisome position: 52.69
GC content: 27.36
Gene sequence:
>954_bases TTGAAAGGTATGATTTTAGAGATATTTTATACATCGCTAATTAGTACTTTAAAAATATCTTTAGTTGTGCTTTCAACGAT ATATATCGTAAATTATTTTTTAAATAAGGGCCTCCTAGAAAAAATTTCAAATTTTCTTGCCCCAATTACAGAAAAACTTA AATTAAATAGCTTTTTAATATCTTCAATAATGGTATCCTTTCTTAGCCCTACAGTTGGTTATACGCTACTTTCAGACGGT ATAAAAGATAATAAACTAACTGAAAAAGAGGTTCTTTTTGGAAGCCTTGCAAATTCGTTTCCTGCGGTTTTTTCACACGC TTTAACATACTATGTCCCAGTAGTTATTCCTATTTTAGGATATACTGGAATAATATATGTAATTTTAAGGCTATTTATCG CATTTGTAAAAAGTATAATTGGCATATTATTAATTAAGGCGACATCTGGTGGTGAAAAATATTTAAAAGAAAATTTAAAA ATTGAAAAACCAAAAAATATCAATAAAAAATTTGAAAAAAGTCCTTTTAATAAAACATTTGATTTTTCAAAACGGTTTAT TCCATTAATGTTCTTATCGATGTTTGGAGTAATTTATTTATCTAAAATGGGATTTTTTGAACATTTTTCAATTTTAATTT TACCCATAACTTCTTTTTTTAATTTAAATCCAAATACCGGGATTTTAGCAATAACTGGGGTAATAAATGTATCTGCAGCA ATGGTTATGGCGGGAACGTTTCTTAAAAGTAGTTCTTTAACTCCAAACGAAGTAATTATTGGTTTACTCCTAGGAAATAT CGTTGCATTTTCAACTCGATCGGTAAAACACTCAATACCCCTCCATTTTTCACTTTTTGGCCCAAAAAGGGGCTCAAAGG TAATTTTATTAAATGCAAGTCTTACAATTATATTGGATATTTTTATAATTTCATTTTTGATAATTTATATGTAA
Upstream 100 bases:
>100_bases AGAATTTGGAAATGTTGAAATTATTGGTATTGTCAATGATAAAAAAGATTTTTATATAGACTTAAAAAAACTAAATTTAC CTTAATAATACGGTGATTTT
Downstream 100 bases:
>100_bases TTTAAAAAGGTGTTTTTAATGAATTTTAATAAATTTTTGTATATCGATTCCCACTGCCACATTGAAGATAAGTCATTTAA TAAAAATAGGGATGAAGTCA
Product: nucleoside recognition domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MKGMILEIFYTSLISTLKISLVVLSTIYIVNYFLNKGLLEKISNFLAPITEKLKLNSFLISSIMVSFLSPTVGYTLLSDG IKDNKLTEKEVLFGSLANSFPAVFSHALTYYVPVVIPILGYTGIIYVILRLFIAFVKSIIGILLIKATSGGEKYLKENLK IEKPKNINKKFEKSPFNKTFDFSKRFIPLMFLSMFGVIYLSKMGFFEHFSILILPITSFFNLNPNTGILAITGVINVSAA MVMAGTFLKSSSLTPNEVIIGLLLGNIVAFSTRSVKHSIPLHFSLFGPKRGSKVILLNASLTIILDIFIISFLIIYM
Sequences:
>Translated_317_residues MKGMILEIFYTSLISTLKISLVVLSTIYIVNYFLNKGLLEKISNFLAPITEKLKLNSFLISSIMVSFLSPTVGYTLLSDG IKDNKLTEKEVLFGSLANSFPAVFSHALTYYVPVVIPILGYTGIIYVILRLFIAFVKSIIGILLIKATSGGEKYLKENLK IEKPKNINKKFEKSPFNKTFDFSKRFIPLMFLSMFGVIYLSKMGFFEHFSILILPITSFFNLNPNTGILAITGVINVSAA MVMAGTFLKSSSLTPNEVIIGLLLGNIVAFSTRSVKHSIPLHFSLFGPKRGSKVILLNASLTIILDIFIISFLIIYM >Mature_317_residues MKGMILEIFYTSLISTLKISLVVLSTIYIVNYFLNKGLLEKISNFLAPITEKLKLNSFLISSIMVSFLSPTVGYTLLSDG IKDNKLTEKEVLFGSLANSFPAVFSHALTYYVPVVIPILGYTGIIYVILRLFIAFVKSIIGILLIKATSGGEKYLKENLK IEKPKNINKKFEKSPFNKTFDFSKRFIPLMFLSMFGVIYLSKMGFFEHFSILILPITSFFNLNPNTGILAITGVINVSAA MVMAGTFLKSSSLTPNEVIIGLLLGNIVAFSTRSVKHSIPLHFSLFGPKRGSKVILLNASLTIILDIFIISFLIIYM
Specific function: Unknown
COG id: COG3366
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0880, MJ1556 and MJ1589 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011642 [H]
Pfam domain/function: PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 35275; Mature: 35275
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGMILEIFYTSLISTLKISLVVLSTIYIVNYFLNKGLLEKISNFLAPITEKLKLNSFLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSIMVSFLSPTVGYTLLSDGIKDNKLTEKEVLFGSLANSFPAVFSHALTYYVPVVIPILG HHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTGIIYVILRLFIAFVKSIIGILLIKATSGGEKYLKENLKIEKPKNINKKFEKSPFNKTF HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCH DFSKRFIPLMFLSMFGVIYLSKMGFFEHFSILILPITSFFNLNPNTGILAITGVINVSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCEEEEEHHHHHHHH MVMAGTFLKSSSLTPNEVIIGLLLGNIVAFSTRSVKHSIPLHFSLFGPKRGSKVILLNAS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECH LTIILDIFIISFLIIYM HHHHHHHHHHHHHHHHC >Mature Secondary Structure MKGMILEIFYTSLISTLKISLVVLSTIYIVNYFLNKGLLEKISNFLAPITEKLKLNSFLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSIMVSFLSPTVGYTLLSDGIKDNKLTEKEVLFGSLANSFPAVFSHALTYYVPVVIPILG HHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTGIIYVILRLFIAFVKSIIGILLIKATSGGEKYLKENLKIEKPKNINKKFEKSPFNKTF HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCH DFSKRFIPLMFLSMFGVIYLSKMGFFEHFSILILPITSFFNLNPNTGILAITGVINVSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCEEEEEHHHHHHHH MVMAGTFLKSSSLTPNEVIIGLLLGNIVAFSTRSVKHSIPLHFSLFGPKRGSKVILLNAS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECH LTIILDIFIISFLIIYM HHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]