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The map label for this gene is yhcC [C]

Identifier: 150399555

GI number: 150399555

Start: 836453

End: 837457

Strand: Reverse

Name: yhcC [C]

Synonym: Mevan_0804

Alternate gene names: 150399555

Gene position: 837457-836453 (Counterclockwise)

Preceding gene: 150399559

Following gene: 150399552

Centisome position: 48.69

GC content: 32.54

Gene sequence:

>1005_bases
ATGAATTTGGTCGGTCAGATTTACAGAACTAATAATGGTTCAATAGATAAAAATATTGTAGATAAAATTTACACGGATGG
ATTTAATATCGCCCAGTACGGCCTTTACATGAAAAGAGAGCGAGACTATAAAACGTTTAAAGTGGCAGTTGATGCGGGAT
TTTCATGCCCTAATAAGGATGGAACGACAGATACAAGGGGATGCATATTTTGCCCTAAAATGGGCCGATCAATAAGTGTA
GAATACTGCAATATTAAATATTCTTTAAAAGAACAAATAGAATGCCAGATTCAACAAAATAGGGAAAAAGGGATAAGTAA
ATTTTACGTTTATTTTTATCCTGGAACAAACACTCACGGGCCTTTAAACCACCTAAAGAAGTTATGGGATTATGCACTTT
CTTTTGAAGATGTAATAGGACTTTCAATTGGTACAAGGCCAGACTGTCTTGAAAATGAAAAACTCGATATTTTGGAACAT
TATGTGAAGCAAGGATATGAAATATGGATAGATTTAGGAATTCAAACGATGCACGATGAAACGCTTGATTTTTTAAACCG
AAAACATACGTCAAAAGATGTAGAACGAGTTTTAACGGAATGCAAAAAAAGAGGAATACTTGTATGTGGGCATATAATTT
TGGGCCTTCCAAATGAAAATTGGAAAATGATGATGAAAACTGCGAAGGTGTTATCCGACTTAAAAATAGACGCACTTAAA
ATTTACCCCCTTGTAGTCATAGAAAACACCGAATTAGAGTTATTATACTGGAAAGGAGAATATAAGTCTTTAGATGAAAA
ACAGTACATCTATTTAGTAACTGACTTTTTAGAACATCTTTCAAAGTACGTAATTATTCAAAGAGTTTCAAAGGATAAAG
TTCCAAATGAAATAAAAATTTCACCGGAATGGTCGTTAAAGCGTCTTAGAATTTTAAACGAAGTTTCAAAGGAACTAAGT
AGGAGAAATTCAAAACAGGGTTTTAAATATATTGAAAAATTTTAA

Upstream 100 bases:

>100_bases
ATCGTTATGAAGTTCCATAATTTTCACCTTTAATGAACATATATCAATATAAAGACCGGATATTTATTATATCCTATAAA
TTTTAGATTCCGGTGGTTTC

Downstream 100 bases:

>100_bases
TAAAAATAAAAGTAAGTAAAAGTAAAAATTAACAGAATAAAATTTTAAAATAAAGGAAGCGTTTTTCTAATGTCCCTTTC
AATTTTTGACATTTCATTTG

Product: putative radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNLVGQIYRTNNGSIDKNIVDKIYTDGFNIAQYGLYMKRERDYKTFKVAVDAGFSCPNKDGTTDTRGCIFCPKMGRSISV
EYCNIKYSLKEQIECQIQQNREKGISKFYVYFYPGTNTHGPLNHLKKLWDYALSFEDVIGLSIGTRPDCLENEKLDILEH
YVKQGYEIWIDLGIQTMHDETLDFLNRKHTSKDVERVLTECKKRGILVCGHIILGLPNENWKMMMKTAKVLSDLKIDALK
IYPLVVIENTELELLYWKGEYKSLDEKQYIYLVTDFLEHLSKYVIIQRVSKDKVPNEIKISPEWSLKRLRILNEVSKELS
RRNSKQGFKYIEKF

Sequences:

>Translated_334_residues
MNLVGQIYRTNNGSIDKNIVDKIYTDGFNIAQYGLYMKRERDYKTFKVAVDAGFSCPNKDGTTDTRGCIFCPKMGRSISV
EYCNIKYSLKEQIECQIQQNREKGISKFYVYFYPGTNTHGPLNHLKKLWDYALSFEDVIGLSIGTRPDCLENEKLDILEH
YVKQGYEIWIDLGIQTMHDETLDFLNRKHTSKDVERVLTECKKRGILVCGHIILGLPNENWKMMMKTAKVLSDLKIDALK
IYPLVVIENTELELLYWKGEYKSLDEKQYIYLVTDFLEHLSKYVIIQRVSKDKVPNEIKISPEWSLKRLRILNEVSKELS
RRNSKQGFKYIEKF
>Mature_334_residues
MNLVGQIYRTNNGSIDKNIVDKIYTDGFNIAQYGLYMKRERDYKTFKVAVDAGFSCPNKDGTTDTRGCIFCPKMGRSISV
EYCNIKYSLKEQIECQIQQNREKGISKFYVYFYPGTNTHGPLNHLKKLWDYALSFEDVIGLSIGTRPDCLENEKLDILEH
YVKQGYEIWIDLGIQTMHDETLDFLNRKHTSKDVERVLTECKKRGILVCGHIILGLPNENWKMMMKTAKVLSDLKIDALK
IYPLVVIENTELELLYWKGEYKSLDEKQYIYLVTDFLEHLSKYVIIQRVSKDKVPNEIKISPEWSLKRLRILNEVSKELS
RRNSKQGFKYIEKF

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhcC [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=163, Percent_Identity=28.2208588957055, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI2367204, Length=292, Percent_Identity=29.7945205479452, Blast_Score=164, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6325171, Length=200, Percent_Identity=27.5, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39125; Mature: 39125

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVGQIYRTNNGSIDKNIVDKIYTDGFNIAQYGLYMKRERDYKTFKVAVDAGFSCPNKD
CCCCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
GTTDTRGCIFCPKMGRSISVEYCNIKYSLKEQIECQIQQNREKGISKFYVYFYPGTNTHG
CCCCCCCEEEECCCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
PLNHLKKLWDYALSFEDVIGLSIGTRPDCLENEKLDILEHYVKQGYEIWIDLGIQTMHDE
HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCHHHHH
TLDFLNRKHTSKDVERVLTECKKRGILVCGHIILGLPNENWKMMMKTAKVLSDLKIDALK
HHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE
IYPLVVIENTELELLYWKGEYKSLDEKQYIYLVTDFLEHLSKYVIIQRVSKDKVPNEIKI
EEEEEEEECCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEE
SPEWSLKRLRILNEVSKELSRRNSKQGFKYIEKF
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure
MNLVGQIYRTNNGSIDKNIVDKIYTDGFNIAQYGLYMKRERDYKTFKVAVDAGFSCPNKD
CCCCEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC
GTTDTRGCIFCPKMGRSISVEYCNIKYSLKEQIECQIQQNREKGISKFYVYFYPGTNTHG
CCCCCCCEEEECCCCCEEEEEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCC
PLNHLKKLWDYALSFEDVIGLSIGTRPDCLENEKLDILEHYVKQGYEIWIDLGIQTMHDE
HHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCHHHHH
TLDFLNRKHTSKDVERVLTECKKRGILVCGHIILGLPNENWKMMMKTAKVLSDLKIDALK
HHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEE
IYPLVVIENTELELLYWKGEYKSLDEKQYIYLVTDFLEHLSKYVIIQRVSKDKVPNEIKI
EEEEEEEECCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEE
SPEWSLKRLRILNEVSKELSRRNSKQGFKYIEKF
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]