| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399559
Identifier: 150399559
GI number: 150399559
Start: 840331
End: 840843
Strand: Reverse
Name: 150399559
Synonym: Mevan_0808
Alternate gene names: NA
Gene position: 840843-840331 (Counterclockwise)
Preceding gene: 150399560
Following gene: 150399555
Centisome position: 48.88
GC content: 29.04
Gene sequence:
>513_bases ATGCGGGCTCATGAACGACTTTTACTTAGTGTTGGTTCTGACAAATTTACAGACGAGTTTAAAAAGATATTGCTTGAATT AGATATTCCATTAAAAGAATTTTCCGAAATTTCTGATATTCCTTATAGTACATTATATAAGGTTATAAATGAAAAAGATT TTAGAATATCAACTCTTAAAAAAATAGTAAATACAATTAAAACCCTTGAAAAGGGTGATGATTTAGAAGATAAAATAGCA GTAATTGCAGCAAGACCGTCTTTAAACAAAATAAGTACTAAAAAAATAGATATAAATGGTAAAAATTATCTTTTAAAAGA ATATCCTGCAAATACGCTTGAAGAATGTATTGTTTCTGCAATTCATGCTGAACGAGAAGGCGTAAAAGCTATAGTTTGTG CACCAATCGTAAGTACAAGTATTGAAAAGGTAGTGAGAGTTCCAGTTGCAGTAATCATTGCAGAAAAAAATTCGTTTTTA GAGGCCCTTGAAATTGTTGTTTCAAAAATTTAA
Upstream 100 bases:
>100_bases AAAAAATAATTCCAAAGTCAGCTAATCGGACAAAAGGATCATTGGGAATAGATTATATTGTATAAATACCTTATTCTCTT TTTTAATCTAGGTGGGATAT
Downstream 100 bases:
>100_bases ATTAATATAAAATTAAATTGTTTCAACATATGAGTTAACTCTTGAAATGTTTTTACAAAGTGCTTCATCTAGTTCATATT CCACGTAATCAATAGAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MRAHERLLLSVGSDKFTDEFKKILLELDIPLKEFSEISDIPYSTLYKVINEKDFRISTLKKIVNTIKTLEKGDDLEDKIA VIAARPSLNKISTKKIDINGKNYLLKEYPANTLEECIVSAIHAEREGVKAIVCAPIVSTSIEKVVRVPVAVIIAEKNSFL EALEIVVSKI
Sequences:
>Translated_170_residues MRAHERLLLSVGSDKFTDEFKKILLELDIPLKEFSEISDIPYSTLYKVINEKDFRISTLKKIVNTIKTLEKGDDLEDKIA VIAARPSLNKISTKKIDINGKNYLLKEYPANTLEECIVSAIHAEREGVKAIVCAPIVSTSIEKVVRVPVAVIIAEKNSFL EALEIVVSKI >Mature_170_residues MRAHERLLLSVGSDKFTDEFKKILLELDIPLKEFSEISDIPYSTLYKVINEKDFRISTLKKIVNTIKTLEKGDDLEDKIA VIAARPSLNKISTKKIDINGKNYLLKEYPANTLEECIVSAIHAEREGVKAIVCAPIVSTSIEKVVRVPVAVIIAEKNSFL EALEIVVSKI
Specific function: Unknown
COG id: COG4800
COG function: function code K; Predicted transcriptional regulator with an HTH domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR010982 - InterPro: IPR016472 [H]
Pfam domain/function: PF01381 HTH_3 [H]
EC number: NA
Molecular weight: Translated: 19054; Mature: 19054
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAHERLLLSVGSDKFTDEFKKILLELDIPLKEFSEISDIPYSTLYKVINEKDFRISTLK CCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHH KIVNTIKTLEKGDDLEDKIAVIAARPSLNKISTKKIDINGKNYLLKEYPANTLEECIVSA HHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCEEEEECCCCEEHHHCCCHHHHHHHHHH IHAEREGVKAIVCAPIVSTSIEKVVRVPVAVIIAEKNSFLEALEIVVSKI HHHHHCCCEEEEHHHHHHHHHHHHHHCCHHEEEECCHHHHHHHHHHHHCC >Mature Secondary Structure MRAHERLLLSVGSDKFTDEFKKILLELDIPLKEFSEISDIPYSTLYKVINEKDFRISTLK CCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHH KIVNTIKTLEKGDDLEDKIAVIAARPSLNKISTKKIDINGKNYLLKEYPANTLEECIVSA HHHHHHHHHHCCCCCCHHEEEEEECCCCCCCCCEEEEECCCCEEHHHCCCHHHHHHHHHH IHAEREGVKAIVCAPIVSTSIEKVVRVPVAVIIAEKNSFLEALEIVVSKI HHHHHCCCEEEEHHHHHHHHHHHHHHCCHHEEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]