| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is mtaD
Identifier: 150399551
GI number: 150399551
Start: 832344
End: 833612
Strand: Reverse
Name: mtaD
Synonym: Mevan_0800
Alternate gene names: 150399551
Gene position: 833612-832344 (Counterclockwise)
Preceding gene: 150399552
Following gene: 150399549
Centisome position: 48.46
GC content: 30.5
Gene sequence:
>1269_bases ATGATTTTGGTAAAAGATGCAATTATTAACGGAAAAAAACAGGATTTACTTGTTGAAGGGAATATTATTAAAAAAATTGG AAATGTTCCAATTTCTGAAGTTTCAAAAGACGAAACAGAAATAATTGACGGAAAAAATTGTATTTTAATTCCGGGATTGG TAAATACGCATACCCATATTCCAATGTCACTTTTTAGGGGGGTTGCAGATGATATTCCTTTAATGGAGTGGTTAAGTGGC CATATTTGGCCAATGGAATCAAAATTAAATGAAAAAATAGTATATGCTGGAACCCTACTTGGGGCAGTTGAAATGATTAA AAGCGGAACAACTGCATTTAATGACATGTATTTTTTCCTTGATTCGATAATTAAGGCAGTAGATGAAACAGGAATTAGGT CAACAATTGCATATGGAATGATTGATTTATTTAATGAAGAAAAAAGGGAAAAAGAATTAAAATCTGCGAAAAAATCTATT GAAATGATTAAAAAATTAAATAATTCAAGAATTACGGGGGCTTTAGGCCCACATGCACCGTATACTTGTTCAAAAGAACT GTTGGAAAGTACAAATGCTCTTGCAAGGGAGTATAATGTTCCAATTCATATTCACATGAACGAAACCGTTGATGAAATAA ATCAAGTTTTGGAAAAAACAAAAATGAGGCCTTTTGAATACTTAAACTCATTTGGGTTTTTTGACAATGTAACTACCGTT TGTGCACACTGTGTTCATTTAAATGACTCTGAAATCAAGATAATAAAAGAAAAAAATATCTTTGTAGCACATAATCCTAT AAGTAACTTAAAATTGGCATCAGGAGTGTCCCCTGTAGCAAAATTATTAGAAAACGAAGTTAATATAACTCTTGGAACTG ATGGATGCGGTAGTAATAATAGTTTAAATTTATTTGAAGAAATGAAAACAGCAGCTTTAATACATAAAGGGGTAAATTTA AATCCTGTTTTAGTAACTGCAAAAGAAGCATTTGAATTTGGAACCCTAAACGGTGCAAAAGCATTAAATATTAATTCTGG AGAAATAAAAGAAGGAAAACTTGCAGATTTTGCACTTATAAATGTTAAAAAACCTTACTTAACACCGAGAGAAAATATTG AATCACACTTAGTTTATTCATTTAATGGTGCAGTTGATAGTGTTGTAATTGATGGTAAACTTACTTTAAAGGATGGAAAA ATGGTAACTATTGATGAAGAAAAAGTTTACGAACTTGCAGAAGAGGCATATTTAGAATTAACTAAATAA
Upstream 100 bases:
>100_bases ACTTAATAAATAATTTATAAATTTACTTTTAAATCTATAAATTGGATTTAAAAGTTGTAAATTAGTCGCTTAATAATTTT TAAATTTAGGGTTGATTTTA
Downstream 100 bases:
>100_bases AATCTTTTTTTAAATTTTCATTTAAATATATTAAAAATTCTTCTTCTATTTTTTTAAAATTAATTTTTTCATGCTCAATA CTTTTAAATTCTTTTAAAAA
Product: amidohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MILVKDAIINGKKQDLLVEGNIIKKIGNVPISEVSKDETEIIDGKNCILIPGLVNTHTHIPMSLFRGVADDIPLMEWLSG HIWPMESKLNEKIVYAGTLLGAVEMIKSGTTAFNDMYFFLDSIIKAVDETGIRSTIAYGMIDLFNEEKREKELKSAKKSI EMIKKLNNSRITGALGPHAPYTCSKELLESTNALAREYNVPIHIHMNETVDEINQVLEKTKMRPFEYLNSFGFFDNVTTV CAHCVHLNDSEIKIIKEKNIFVAHNPISNLKLASGVSPVAKLLENEVNITLGTDGCGSNNSLNLFEEMKTAALIHKGVNL NPVLVTAKEAFEFGTLNGAKALNINSGEIKEGKLADFALINVKKPYLTPRENIESHLVYSFNGAVDSVVIDGKLTLKDGK MVTIDEEKVYELAEEAYLELTK
Sequences:
>Translated_422_residues MILVKDAIINGKKQDLLVEGNIIKKIGNVPISEVSKDETEIIDGKNCILIPGLVNTHTHIPMSLFRGVADDIPLMEWLSG HIWPMESKLNEKIVYAGTLLGAVEMIKSGTTAFNDMYFFLDSIIKAVDETGIRSTIAYGMIDLFNEEKREKELKSAKKSI EMIKKLNNSRITGALGPHAPYTCSKELLESTNALAREYNVPIHIHMNETVDEINQVLEKTKMRPFEYLNSFGFFDNVTTV CAHCVHLNDSEIKIIKEKNIFVAHNPISNLKLASGVSPVAKLLENEVNITLGTDGCGSNNSLNLFEEMKTAALIHKGVNL NPVLVTAKEAFEFGTLNGAKALNINSGEIKEGKLADFALINVKKPYLTPRENIESHLVYSFNGAVDSVVIDGKLTLKDGK MVTIDEEKVYELAEEAYLELTK >Mature_422_residues MILVKDAIINGKKQDLLVEGNIIKKIGNVPISEVSKDETEIIDGKNCILIPGLVNTHTHIPMSLFRGVADDIPLMEWLSG HIWPMESKLNEKIVYAGTLLGAVEMIKSGTTAFNDMYFFLDSIIKAVDETGIRSTIAYGMIDLFNEEKREKELKSAKKSI EMIKKLNNSRITGALGPHAPYTCSKELLESTNALAREYNVPIHIHMNETVDEINQVLEKTKMRPFEYLNSFGFFDNVTTV CAHCVHLNDSEIKIIKEKNIFVAHNPISNLKLASGVSPVAKLLENEVNITLGTDGCGSNNSLNLFEEMKTAALIHKGVNL NPVLVTAKEAFEFGTLNGAKALNINSGEIKEGKLADFALINVKKPYLTPRENIESHLVYSFNGAVDSVVIDGKLTLKDGK MVTIDEEKVYELAEEAYLELTK
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family
Homologues:
Organism=Homo sapiens, GI4758426, Length=386, Percent_Identity=29.2746113989637, Blast_Score=127, Evalue=3e-29, Organism=Escherichia coli, GI1789249, Length=395, Percent_Identity=28.3544303797468, Blast_Score=121, Evalue=7e-29, Organism=Escherichia coli, GI87082177, Length=432, Percent_Identity=25.2314814814815, Blast_Score=119, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6319963, Length=349, Percent_Identity=24.6418338108883, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI24643849, Length=357, Percent_Identity=29.1316526610644, Blast_Score=134, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTAD_METVS (A6UQD4)
Other databases:
- EMBL: CP000742 - RefSeq: YP_001323318.1 - ProteinModelPortal: A6UQD4 - SMR: A6UQD4 - STRING: A6UQD4 - GeneID: 5324649 - GenomeReviews: CP000742_GR - KEGG: mvn:Mevan_0800 - eggNOG: arNOG04550 - HOGENOM: HBG668170 - OMA: KVIDMAT - ProtClustDB: CLSK876616 - HAMAP: MF_01281 - InterPro: IPR006680 - InterPro: IPR011059
Pfam domain/function: PF01979 Amidohydro_1; SSF51338 Metalo_hydrolase
EC number: =3.5.4.28
Molecular weight: Translated: 46768; Mature: 46768
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: BINDING 86-86 BINDING 178-178 BINDING 208-208 BINDING 294-294
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVKDAIINGKKQDLLVEGNIIKKIGNVPISEVSKDETEIIDGKNCILIPGLVNTHTHI CEEEECHHHCCCCCCEEEECHHHHHHCCCCHHHCCCCCHHEECCCCEEEECCCCCCCCCC PMSLFRGVADDIPLMEWLSGHIWPMESKLNEKIVYAGTLLGAVEMIKSGTTAFNDMYFFL CHHHHHHHCCCCCHHHHHCCCCCCCHHCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHH DSIIKAVDETGIRSTIAYGMIDLFNEEKREKELKSAKKSIEMIKKLNNSRITGALGPHAP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC YTCSKELLESTNALAREYNVPIHIHMNETVDEINQVLEKTKMRPFEYLNSFGFFDNVTTV CHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHH CAHCVHLNDSEIKIIKEKNIFVAHNPISNLKLASGVSPVAKLLENEVNITLGTDGCGSNN HHHHHCCCCCCEEEEEECCEEEEECCCCCCCHHCCCHHHHHHHCCCCEEEEECCCCCCCC SLNLFEEMKTAALIHKGVNLNPVLVTAKEAFEFGTLNGAKALNINSGEIKEGKLADFALI CCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEE NVKKPYLTPRENIESHLVYSFNGAVDSVVIDGKLTLKDGKMVTIDEEKVYELAEEAYLEL EECCCCCCCCCCCCCEEEEEECCCCCEEEECCEEEEECCCEEEECHHHHHHHHHHHHHCC TK CC >Mature Secondary Structure MILVKDAIINGKKQDLLVEGNIIKKIGNVPISEVSKDETEIIDGKNCILIPGLVNTHTHI CEEEECHHHCCCCCCEEEECHHHHHHCCCCHHHCCCCCHHEECCCCEEEECCCCCCCCCC PMSLFRGVADDIPLMEWLSGHIWPMESKLNEKIVYAGTLLGAVEMIKSGTTAFNDMYFFL CHHHHHHHCCCCCHHHHHCCCCCCCHHCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHH DSIIKAVDETGIRSTIAYGMIDLFNEEKREKELKSAKKSIEMIKKLNNSRITGALGPHAP HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC YTCSKELLESTNALAREYNVPIHIHMNETVDEINQVLEKTKMRPFEYLNSFGFFDNVTTV CHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHH CAHCVHLNDSEIKIIKEKNIFVAHNPISNLKLASGVSPVAKLLENEVNITLGTDGCGSNN HHHHHCCCCCCEEEEEECCEEEEECCCCCCCHHCCCHHHHHHHCCCCEEEEECCCCCCCC SLNLFEEMKTAALIHKGVNLNPVLVTAKEAFEFGTLNGAKALNINSGEIKEGKLADFALI CCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEE NVKKPYLTPRENIESHLVYSFNGAVDSVVIDGKLTLKDGKMVTIDEEKVYELAEEAYLEL EECCCCCCCCCCCCCEEEEEECCCCCEEEECCEEEEECCCEEEECHHHHHHHHHHHHHCC TK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA