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The map label for this gene is rpe [H]

Identifier: 150399191

GI number: 150399191

Start: 491161

End: 491817

Strand: Reverse

Name: rpe [H]

Synonym: Mevan_0439

Alternate gene names: 150399191

Gene position: 491817-491161 (Counterclockwise)

Preceding gene: 150399192

Following gene: 150399190

Centisome position: 28.59

GC content: 33.64

Gene sequence:

>657_bases
ATGGTAATGATTGGTGCATCAATTCTTTCTGCGGATTATGGAAACATGAGTGAGGAAGTAAAAAAAGCAGAAAACGCAAA
AATTGATTTTTTCCATGTAGACATCATGGATGGGCATTTTGTTCCAAATTTAAGTCTGGGATTAAGTGTCCCAATGGATT
TGAAAAAGATAACGGACTTTCCACTGGACGTTCATTTGATGGTAGAAAACCCTGAGAAATTTATTCCAAAAGTTGCAGGT
TACGCCGAAATGGTTGCTTTTCATGCAGAATCTACTAAATATTTATTTAAAACTATAGATTTGATAAAAGAATACGGTGC
AAAACCGATAATTGCACTAAATCCTTCTACAACTATAGACTGTTTAGAATACGTATTAGACGAACTTTACGGGGTTTTGG
TAATGAGTGTTGAACCAGGATTTTCCGGTCAATCGTTTATAAACCCAATGGTTAAAAAAATAGACGTATTGAAAAAAAAG
ATAACTTCTGAAAATTATGATACTAAAATATTTGTTGATGGCGGAATAAATGTAAATACTGCTCCAAAAGTAGTAGCAGT
AGGTGCCGATGCTTTAATTGCTGCTTCTGCAATTTATGGAAAAGAAGACATCAACTCTGCAGTAAACGAATTAAGAAACT
CTGTAAACAGATTATAA

Upstream 100 bases:

>100_bases
CCACGGAAAAGCACCAAATAAAGAAGAACTAAAAAAAGCACTTACAGAACTCGAATAAATTTTTCTAATAATTATGTAAT
ACTTAAAAACGGTGAAATAA

Downstream 100 bases:

>100_bases
CTAATTTCACAATATTTATTTACTTTATTTACTTTATTTACATTTCTTACACTATTACTTAATAAATTTAAACTTTTAAC
GGTGACGCTTAATGATAGGT

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MVMIGASILSADYGNMSEEVKKAENAKIDFFHVDIMDGHFVPNLSLGLSVPMDLKKITDFPLDVHLMVENPEKFIPKVAG
YAEMVAFHAESTKYLFKTIDLIKEYGAKPIIALNPSTTIDCLEYVLDELYGVLVMSVEPGFSGQSFINPMVKKIDVLKKK
ITSENYDTKIFVDGGINVNTAPKVVAVGADALIAASAIYGKEDINSAVNELRNSVNRL

Sequences:

>Translated_218_residues
MVMIGASILSADYGNMSEEVKKAENAKIDFFHVDIMDGHFVPNLSLGLSVPMDLKKITDFPLDVHLMVENPEKFIPKVAG
YAEMVAFHAESTKYLFKTIDLIKEYGAKPIIALNPSTTIDCLEYVLDELYGVLVMSVEPGFSGQSFINPMVKKIDVLKKK
ITSENYDTKIFVDGGINVNTAPKVVAVGADALIAASAIYGKEDINSAVNELRNSVNRL
>Mature_218_residues
MVMIGASILSADYGNMSEEVKKAENAKIDFFHVDIMDGHFVPNLSLGLSVPMDLKKITDFPLDVHLMVENPEKFIPKVAG
YAEMVAFHAESTKYLFKTIDLIKEYGAKPIIALNPSTTIDCLEYVLDELYGVLVMSVEPGFSGQSFINPMVKKIDVLKKK
ITSENYDTKIFVDGGINVNTAPKVVAVGADALIAASAIYGKEDINSAVNELRNSVNRL

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=213, Percent_Identity=37.0892018779343, Blast_Score=139, Evalue=1e-33,
Organism=Homo sapiens, GI219879828, Length=213, Percent_Identity=35.2112676056338, Blast_Score=131, Evalue=4e-31,
Organism=Homo sapiens, GI24307923, Length=169, Percent_Identity=31.9526627218935, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1789788, Length=221, Percent_Identity=38.9140271493213, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1790523, Length=196, Percent_Identity=36.2244897959184, Blast_Score=128, Evalue=2e-31,
Organism=Escherichia coli, GI1790754, Length=211, Percent_Identity=28.9099526066351, Blast_Score=101, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17552948, Length=215, Percent_Identity=34.4186046511628, Blast_Score=121, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6322341, Length=229, Percent_Identity=34.9344978165939, Blast_Score=148, Evalue=5e-37,
Organism=Drosophila melanogaster, GI24586301, Length=216, Percent_Identity=36.5740740740741, Blast_Score=133, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23909; Mature: 23909

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMIGASILSADYGNMSEEVKKAENAKIDFFHVDIMDGHFVPNLSLGLSVPMDLKKITDF
CEEECCHHHHCCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCC
PLDVHLMVENPEKFIPKVAGYAEMVAFHAESTKYLFKTIDLIKEYGAKPIIALNPSTTID
CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHH
CLEYVLDELYGVLVMSVEPGFSGQSFINPMVKKIDVLKKKITSENYDTKIFVDGGINVNT
HHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
APKVVAVGADALIAASAIYGKEDINSAVNELRNSVNRL
CCCEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVMIGASILSADYGNMSEEVKKAENAKIDFFHVDIMDGHFVPNLSLGLSVPMDLKKITDF
CEEECCHHHHCCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHCCC
PLDVHLMVENPEKFIPKVAGYAEMVAFHAESTKYLFKTIDLIKEYGAKPIIALNPSTTID
CCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHH
CLEYVLDELYGVLVMSVEPGFSGQSFINPMVKKIDVLKKKITSENYDTKIFVDGGINVNT
HHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
APKVVAVGADALIAASAIYGKEDINSAVNELRNSVNRL
CCCEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]