Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399178

Identifier: 150399178

GI number: 150399178

Start: 479830

End: 480237

Strand: Reverse

Name: 150399178

Synonym: Mevan_0425

Alternate gene names: NA

Gene position: 480237-479830 (Counterclockwise)

Preceding gene: 150399179

Following gene: 150399172

Centisome position: 27.92

GC content: 30.88

Gene sequence:

>408_bases
GTGAATACAATAGAAAATGTAGATCGTAAATTAATAGAAAATCTAGCTAACTTGATGTCTAGCGAAGTTAGGGCAAAAAT
ATATATTTACCTAAGAAAATATGATAAAAGCACTGTTGATGATATTGCAGACGGAACAGGAATATATCCTTCAACAGTAA
GGGAATCTATTTTAGAAATGTATAATACTGGCTACGTTTCAAGAGAAAAGATGGATAAGGAAGGACTCGGTAAAAAGCCG
TATTTGTATACTGCAGCAGCTCCTTCTGAAATAGTTAGAAAAATTTCAAAAAGTATTCAGGAAAAGTTAAATGACCTGAT
AATGGTTGATAGAAAATTAGAATCCGGAAAAGAAGGTGTTTCATCAAATCCTGTAAAAATTGTTGTTGATGAAAAATATA
CTGAATAA

Upstream 100 bases:

>100_bases
TATTTTATTTAGATATATATTTAGGACTTTTAAAGTGGGGGTACTTTGAAAGGACTAACATTTGTTAACTTTTCGAATGT
TTTATCGGGGGCGATAAATA

Downstream 100 bases:

>100_bases
CTTAATTTTTTAATTTCAATGCTCAAAAATTTAATTTATTTAAACTTTTGAAAATATTATTTTTTTAAGATTTTTTATCA
ATTTTTCCTTCAAATTCTTC

Product: transcriptional regulator TrmB

Products: NA

Alternate protein names: Transcription Regulator; Sugar-Specific Transcriptional Regulator Trmb

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNTIENVDRKLIENLANLMSSEVRAKIYIYLRKYDKSTVDDIADGTGIYPSTVRESILEMYNTGYVSREKMDKEGLGKKP
YLYTAAAPSEIVRKISKSIQEKLNDLIMVDRKLESGKEGVSSNPVKIVVDEKYTE

Sequences:

>Translated_135_residues
MNTIENVDRKLIENLANLMSSEVRAKIYIYLRKYDKSTVDDIADGTGIYPSTVRESILEMYNTGYVSREKMDKEGLGKKP
YLYTAAAPSEIVRKISKSIQEKLNDLIMVDRKLESGKEGVSSNPVKIVVDEKYTE
>Mature_135_residues
MNTIENVDRKLIENLANLMSSEVRAKIYIYLRKYDKSTVDDIADGTGIYPSTVRESILEMYNTGYVSREKMDKEGLGKKP
YLYTAAAPSEIVRKISKSIQEKLNDLIMVDRKLESGKEGVSSNPVKIVVDEKYTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15347; Mature: 15347

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIENVDRKLIENLANLMSSEVRAKIYIYLRKYDKSTVDDIADGTGIYPSTVRESILEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHH
YNTGYVSREKMDKEGLGKKPYLYTAAAPSEIVRKISKSIQEKLNDLIMVDRKLESGKEGV
HHCCCCCHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SSNPVKIVVDEKYTE
CCCCEEEEECCCCCC
>Mature Secondary Structure
MNTIENVDRKLIENLANLMSSEVRAKIYIYLRKYDKSTVDDIADGTGIYPSTVRESILEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHH
YNTGYVSREKMDKEGLGKKPYLYTAAAPSEIVRKISKSIQEKLNDLIMVDRKLESGKEGV
HHCCCCCHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SSNPVKIVVDEKYTE
CCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA