| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399178
Identifier: 150399178
GI number: 150399178
Start: 479830
End: 480237
Strand: Reverse
Name: 150399178
Synonym: Mevan_0425
Alternate gene names: NA
Gene position: 480237-479830 (Counterclockwise)
Preceding gene: 150399179
Following gene: 150399172
Centisome position: 27.92
GC content: 30.88
Gene sequence:
>408_bases GTGAATACAATAGAAAATGTAGATCGTAAATTAATAGAAAATCTAGCTAACTTGATGTCTAGCGAAGTTAGGGCAAAAAT ATATATTTACCTAAGAAAATATGATAAAAGCACTGTTGATGATATTGCAGACGGAACAGGAATATATCCTTCAACAGTAA GGGAATCTATTTTAGAAATGTATAATACTGGCTACGTTTCAAGAGAAAAGATGGATAAGGAAGGACTCGGTAAAAAGCCG TATTTGTATACTGCAGCAGCTCCTTCTGAAATAGTTAGAAAAATTTCAAAAAGTATTCAGGAAAAGTTAAATGACCTGAT AATGGTTGATAGAAAATTAGAATCCGGAAAAGAAGGTGTTTCATCAAATCCTGTAAAAATTGTTGTTGATGAAAAATATA CTGAATAA
Upstream 100 bases:
>100_bases TATTTTATTTAGATATATATTTAGGACTTTTAAAGTGGGGGTACTTTGAAAGGACTAACATTTGTTAACTTTTCGAATGT TTTATCGGGGGCGATAAATA
Downstream 100 bases:
>100_bases CTTAATTTTTTAATTTCAATGCTCAAAAATTTAATTTATTTAAACTTTTGAAAATATTATTTTTTTAAGATTTTTTATCA ATTTTTCCTTCAAATTCTTC
Product: transcriptional regulator TrmB
Products: NA
Alternate protein names: Transcription Regulator; Sugar-Specific Transcriptional Regulator Trmb
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MNTIENVDRKLIENLANLMSSEVRAKIYIYLRKYDKSTVDDIADGTGIYPSTVRESILEMYNTGYVSREKMDKEGLGKKP YLYTAAAPSEIVRKISKSIQEKLNDLIMVDRKLESGKEGVSSNPVKIVVDEKYTE
Sequences:
>Translated_135_residues MNTIENVDRKLIENLANLMSSEVRAKIYIYLRKYDKSTVDDIADGTGIYPSTVRESILEMYNTGYVSREKMDKEGLGKKP YLYTAAAPSEIVRKISKSIQEKLNDLIMVDRKLESGKEGVSSNPVKIVVDEKYTE >Mature_135_residues MNTIENVDRKLIENLANLMSSEVRAKIYIYLRKYDKSTVDDIADGTGIYPSTVRESILEMYNTGYVSREKMDKEGLGKKP YLYTAAAPSEIVRKISKSIQEKLNDLIMVDRKLESGKEGVSSNPVKIVVDEKYTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15347; Mature: 15347
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIENVDRKLIENLANLMSSEVRAKIYIYLRKYDKSTVDDIADGTGIYPSTVRESILEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHH YNTGYVSREKMDKEGLGKKPYLYTAAAPSEIVRKISKSIQEKLNDLIMVDRKLESGKEGV HHCCCCCHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SSNPVKIVVDEKYTE CCCCEEEEECCCCCC >Mature Secondary Structure MNTIENVDRKLIENLANLMSSEVRAKIYIYLRKYDKSTVDDIADGTGIYPSTVRESILEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHH YNTGYVSREKMDKEGLGKKPYLYTAAAPSEIVRKISKSIQEKLNDLIMVDRKLESGKEGV HHCCCCCHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SSNPVKIVVDEKYTE CCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA