| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is argD [H]
Identifier: 150399179
GI number: 150399179
Start: 480555
End: 481745
Strand: Reverse
Name: argD [H]
Synonym: Mevan_0426
Alternate gene names: 150399179
Gene position: 481745-480555 (Counterclockwise)
Preceding gene: 150399185
Following gene: 150399178
Centisome position: 28.01
GC content: 33.84
Gene sequence:
>1191_bases ATGCTTAGTAATCAAGAAATGGATAATGTAATCCTTGAAGAAAGTAAATATGTCATAAATACGTATGGAAGAGTTCCAGC AGTTCTCGTAAAAGGGGATGGAATGAATGTATATGATATTAATGGAAATAGTTATGTTGATTTTCTTTCAGGAATATCTG TAAACAATGTTGGACACTGTCACCCTAAAATTGTTGAAACAATTAAAAAGCAGGCTGAAACACTTATTCACGTTTCAAAT ATATACTATAATATTCCCCAAGTAAATCTTGCAAAAAAACTCGTGAATATAAGTGGGCTTGATAAAGCATTCTTTTGTAA CAGCGGTGCGGAGGCAAACGAAGCTGCAATAAAACTTTCAAGAAAGTATTCAAAAGCTTTTGGAAAAGAAGGGGAAATTA TTACAATGGAGCATGCATTCCACGGTAGAACCCTAACAACGATTACTGCAACCCCTAAACCAAAGTATCAGGAAGGTTAC GATCCATTACCGACAGGATTTAAGCATGTTCCTTTTAATGATATAGAAAAATTAAAAGAGTCCATTTCAAATAAAACCGC AGCAATAATGATAGAGCCAGTTCAGGGCGAAGGTGGAATTCATATTGCAGACCAAGAATATTTAAAAGCTGTTCGTGAGT TATGTGATGATAAAAATATTGTTTTGATATTTGATGAGGTACAGTGCGGGCTTGGAAGAACTGGTAAAATGTTTGCATTT GAACATTACGGTGTAAAACCCGATATAATAACATTAGCAAAGGCACTTGGTAGCGGAATCCCAATTGGTGCAATGATTGC AAAAGACGAAGTTTCAAATGCGTTTACTCCTGGAAGCCATGGTACTACTTTTGGAGGAAATCCTCTTGCATGCGCTACTG CAATTACTTCAATTAATTTAATTTCAGAACTTTTAAATAATACGAACGAAATGGGCGTTTATTTTACTGATAAATTGAAG AAAATTGAAGAAAAATATGACTTTGTAAGGGAAGTTAGATCAATTGGACTTATGACGGGACTTGAATTGAGTTTCAATGG TTCAAACATCGTTCAGGAAATGTTTAAACAAGGTTACCTTATAAACTGTACTTCAGATACGGTTTTAAGATTTTTACCTC CATTAATTATTCAAAAAGAGCATATTGATGGAATGGTATCAAGTCTTGATGATGTATTTTCAAAAATATAA
Upstream 100 bases:
>100_bases ATTGTATTAATTAATTTCTAAAAATATGTTTTTATTAGTAAGTGAAGTAAAAATGTCTAATTATTTTAAAATGTACTAAT TTAATTTTTATGGTGATATT
Downstream 100 bases:
>100_bases ATATAAATATAAATATAAATATAAATATAAATTTATTTTAAATTAAAATACAATTTATTTTAATAACATTGTATTAACAT TAAGATATCACTTATACCAT
Product: acetylornithine aminotransferase
Products: NA
Alternate protein names: ACOAT [H]
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MLSNQEMDNVILEESKYVINTYGRVPAVLVKGDGMNVYDINGNSYVDFLSGISVNNVGHCHPKIVETIKKQAETLIHVSN IYYNIPQVNLAKKLVNISGLDKAFFCNSGAEANEAAIKLSRKYSKAFGKEGEIITMEHAFHGRTLTTITATPKPKYQEGY DPLPTGFKHVPFNDIEKLKESISNKTAAIMIEPVQGEGGIHIADQEYLKAVRELCDDKNIVLIFDEVQCGLGRTGKMFAF EHYGVKPDIITLAKALGSGIPIGAMIAKDEVSNAFTPGSHGTTFGGNPLACATAITSINLISELLNNTNEMGVYFTDKLK KIEEKYDFVREVRSIGLMTGLELSFNGSNIVQEMFKQGYLINCTSDTVLRFLPPLIIQKEHIDGMVSSLDDVFSKI
Sequences:
>Translated_396_residues MLSNQEMDNVILEESKYVINTYGRVPAVLVKGDGMNVYDINGNSYVDFLSGISVNNVGHCHPKIVETIKKQAETLIHVSN IYYNIPQVNLAKKLVNISGLDKAFFCNSGAEANEAAIKLSRKYSKAFGKEGEIITMEHAFHGRTLTTITATPKPKYQEGY DPLPTGFKHVPFNDIEKLKESISNKTAAIMIEPVQGEGGIHIADQEYLKAVRELCDDKNIVLIFDEVQCGLGRTGKMFAF EHYGVKPDIITLAKALGSGIPIGAMIAKDEVSNAFTPGSHGTTFGGNPLACATAITSINLISELLNNTNEMGVYFTDKLK KIEEKYDFVREVRSIGLMTGLELSFNGSNIVQEMFKQGYLINCTSDTVLRFLPPLIIQKEHIDGMVSSLDDVFSKI >Mature_396_residues MLSNQEMDNVILEESKYVINTYGRVPAVLVKGDGMNVYDINGNSYVDFLSGISVNNVGHCHPKIVETIKKQAETLIHVSN IYYNIPQVNLAKKLVNISGLDKAFFCNSGAEANEAAIKLSRKYSKAFGKEGEIITMEHAFHGRTLTTITATPKPKYQEGY DPLPTGFKHVPFNDIEKLKESISNKTAAIMIEPVQGEGGIHIADQEYLKAVRELCDDKNIVLIFDEVQCGLGRTGKMFAF EHYGVKPDIITLAKALGSGIPIGAMIAKDEVSNAFTPGSHGTTFGGNPLACATAITSINLISELLNNTNEMGVYFTDKLK KIEEKYDFVREVRSIGLMTGLELSFNGSNIVQEMFKQGYLINCTSDTVLRFLPPLIIQKEHIDGMVSSLDDVFSKI
Specific function: Involved In Both The Arginine And Lysine Biosynthetic Pathways. [C]
COG id: COG4992
COG function: function code E; Ornithine/acetylornithine aminotransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=387, Percent_Identity=34.625322997416, Blast_Score=257, Evalue=1e-68, Organism=Homo sapiens, GI284507298, Length=288, Percent_Identity=35.0694444444444, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI13994255, Length=370, Percent_Identity=32.7027027027027, Blast_Score=183, Evalue=2e-46, Organism=Homo sapiens, GI37574042, Length=413, Percent_Identity=29.7820823244552, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI226442709, Length=382, Percent_Identity=30.3664921465969, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI226442705, Length=413, Percent_Identity=29.2978208232446, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI24119277, Length=414, Percent_Identity=27.0531400966184, Blast_Score=151, Evalue=8e-37, Organism=Homo sapiens, GI188536080, Length=424, Percent_Identity=24.2924528301887, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI38679950, Length=424, Percent_Identity=24.2924528301887, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI38679946, Length=424, Percent_Identity=24.2924528301887, Blast_Score=99, Evalue=7e-21, Organism=Escherichia coli, GI1789759, Length=388, Percent_Identity=41.7525773195876, Blast_Score=341, Evalue=4e-95, Organism=Escherichia coli, GI1788044, Length=375, Percent_Identity=42.1333333333333, Blast_Score=335, Evalue=3e-93, Organism=Escherichia coli, GI145693181, Length=403, Percent_Identity=37.7171215880893, Blast_Score=257, Evalue=9e-70, Organism=Escherichia coli, GI1787560, Length=393, Percent_Identity=36.6412213740458, Blast_Score=226, Evalue=1e-60, Organism=Escherichia coli, GI1789016, Length=430, Percent_Identity=31.6279069767442, Blast_Score=203, Evalue=2e-53, Organism=Escherichia coli, GI1786991, Length=393, Percent_Identity=27.9898218829517, Blast_Score=137, Evalue=9e-34, Organism=Escherichia coli, GI1786349, Length=338, Percent_Identity=27.2189349112426, Blast_Score=122, Evalue=3e-29, Organism=Caenorhabditis elegans, GI25144271, Length=381, Percent_Identity=36.745406824147, Blast_Score=267, Evalue=9e-72, Organism=Caenorhabditis elegans, GI32564660, Length=420, Percent_Identity=32.6190476190476, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI25144274, Length=260, Percent_Identity=38.0769230769231, Blast_Score=191, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71992977, Length=428, Percent_Identity=29.4392523364486, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI71981843, Length=168, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17541228, Length=422, Percent_Identity=24.8815165876777, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71992985, Length=122, Percent_Identity=35.2459016393443, Blast_Score=77, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324432, Length=406, Percent_Identity=35.9605911330049, Blast_Score=256, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6323470, Length=410, Percent_Identity=34.390243902439, Blast_Score=236, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6324386, Length=312, Percent_Identity=28.2051282051282, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6321456, Length=422, Percent_Identity=23.4597156398104, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI21357415, Length=388, Percent_Identity=36.340206185567, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI161085790, Length=428, Percent_Identity=29.9065420560748, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI28574759, Length=412, Percent_Identity=30.5825242718447, Blast_Score=177, Evalue=8e-45, Organism=Drosophila melanogaster, GI21356575, Length=421, Percent_Identity=28.5035629453682, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI281366494, Length=430, Percent_Identity=25.5813953488372, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24667139, Length=430, Percent_Identity=25.5813953488372, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24667143, Length=430, Percent_Identity=25.5813953488372, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004636 - InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.11 [H]
Molecular weight: Translated: 43604; Mature: 43604
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNQEMDNVILEESKYVINTYGRVPAVLVKGDGMNVYDINGNSYVDFLSGISVNNVGHC CCCCCCHHHHHHHCCCEEEEECCCCCEEEEECCCCEEEECCCCCHHHHHCCCCCCCCCCC HPKIVETIKKQAETLIHVSNIYYNIPQVNLAKKLVNISGLDKAFFCNSGAEANEAAIKLS CHHHHHHHHHHHHHHEEEHHHEEECCCHHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHH RKYSKAFGKEGEIITMEHAFHGRTLTTITATPKPKYQEGYDPLPTGFKHVPFNDIEKLKE HHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH SISNKTAAIMIEPVQGEGGIHIADQEYLKAVRELCDDKNIVLIFDEVQCGLGRTGKMFAF HHCCCEEEEEEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEE EHYGVKPDIITLAKALGSGIPIGAMIAKDEVSNAFTPGSHGTTFGGNPLACATAITSINL ECCCCCCHHHHHHHHHCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ISELLNNTNEMGVYFTDKLKKIEEKYDFVREVRSIGLMTGLELSFNGSNIVQEMFKQGYL HHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCEE INCTSDTVLRFLPPLIIQKEHIDGMVSSLDDVFSKI EEECHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLSNQEMDNVILEESKYVINTYGRVPAVLVKGDGMNVYDINGNSYVDFLSGISVNNVGHC CCCCCCHHHHHHHCCCEEEEECCCCCEEEEECCCCEEEECCCCCHHHHHCCCCCCCCCCC HPKIVETIKKQAETLIHVSNIYYNIPQVNLAKKLVNISGLDKAFFCNSGAEANEAAIKLS CHHHHHHHHHHHHHHEEEHHHEEECCCHHHHHHHHHHCCCCHHEEECCCCCCCHHHHHHH RKYSKAFGKEGEIITMEHAFHGRTLTTITATPKPKYQEGYDPLPTGFKHVPFNDIEKLKE HHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH SISNKTAAIMIEPVQGEGGIHIADQEYLKAVRELCDDKNIVLIFDEVQCGLGRTGKMFAF HHCCCEEEEEEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEE EHYGVKPDIITLAKALGSGIPIGAMIAKDEVSNAFTPGSHGTTFGGNPLACATAITSINL ECCCCCCHHHHHHHHHCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ISELLNNTNEMGVYFTDKLKKIEEKYDFVREVRSIGLMTGLELSFNGSNIVQEMFKQGYL HHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHCCEE INCTSDTVLRFLPPLIIQKEHIDGMVSSLDDVFSKI EEECHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]