| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398993
Identifier: 150398993
GI number: 150398993
Start: 282010
End: 283494
Strand: Reverse
Name: 150398993
Synonym: Mevan_0239
Alternate gene names: NA
Gene position: 283494-282010 (Counterclockwise)
Preceding gene: 150398994
Following gene: 150398992
Centisome position: 16.48
GC content: 27.95
Gene sequence:
>1485_bases ATGGACAGTAGTGTCTTGATACAGCAATGCAACGAATTTTTAGATGGGCTATCTAATTTTGGAGATAATTTTAAAAAACC ATTTCTTGAAAAAGAAAATAGTGTAAACGAACTTCAAAAGAGTCTTGAATGTAATTTATGCATTTTAGAAAATTTAAGGG AAAAAATGGAGTTACAGGGCTTTGAAACGCCGTATATTGGTGTTGGGCAGATTAAAGGTGGAGAAGACGATGATATTTAT GAAATAATTAACTATTCTTCGTATTTAAGAAGAATGGTAGATGAAAAAAAAGGTTCTCTTGAAAGGGCAAAATACGCAAT AGTTTCACACAAAATTGCAATTGGAAATCTTTTAGATGAATTTGGAAATAAAGATATACTTCAAAATTTACCTTACAACG GTTCGTATAAAGAACACTTATCAAAAATACCCCCACTGTTTTTTAAATCATATAAAAACATTTTAAGTGCATTTGAATCA GAAGGATTTTCAAAGCTTCGTTCTTCAAAAATTAAGGGTTTAGAACATGCTTATCCTGAAAAAGGCGTAGTAAGTTCGAT AACTCTGTCTTTAGTTATTATTGAAAATGGGAAAAGAAAATTTAAGCGTGTAAAAATTGAAGAAGAAGATTATGAAGGAT ATATAAAAAGGACGTATGGGGACGCCATAATTACTTCAGTAAAAAAGAACTATTCAAAAAATAAGCTACTAAATGACCAA TATGTTAAAAAAACACTTACTTTAGCTTATTTTACAACGTATTTGCCGGAAATAAAGGAAAAAATCAATTTAGAAGTAAA AGAGTCGCTTTCAAAAGAAGAACGGTGCTTAATTAAAAAATACAGTAACATTTGCGAAAATTTTGAAAATGATGTTTATG AAGGCGGAATTATTGATGTTAGGGCACTTGAAGAAACGAAACTAAAAAAAATGAATATAAAAACAGATTTAGAGGAAAAA GGACTGTATAAAAATGGAAAATTATTAGAAAATTTAAAAAAATCACTTGAAATACAAAATAGGATTTTTGAATCGATTTC CGTTGAAATTCCGATAAAAAAGATTTCAAAAGATCTTTTTATGTACTATCTTTTAAAGTCGCCTGACGAAAGAAGTCGTT CCCATATGTTTTCATCAATACTTGTAACTCCTTCAACTTCCCAATTGAAATGGCTTGATATTGAAGAAATTGAGCCAAAA AAAATACTTGATTTAAAGTTTATGTTTGAAAAAGAGCTTCCAAAGTATGAAATATCGTTAAAAAATATAGGTGGAGTTTC TATATACTTATTATATGGTATGGAAAAAGCTTTAGAGTACGGTTTTGAAAAAACAGGAATTGAAGATATTTTAAAATTAA TTGCTGTAATTGAAGACATTAAAGAAAATTTAAAAGGAAAAATAGACTTAAAAGTTCTTGAAAAGTATTGTAAAATTAAA AAAGAAAAAACGAAAAGCTTTTTAAATGCCCTTGGAAAACTTTAA
Upstream 100 bases:
>100_bases TAAAAGGTCAGATAACCTATCCAAAATATATCTGTCCTGAAAATGCATTAATTAATATTGGAACTTTTGTAGAAAGAATT TAAATTTAATTTGGGAAATC
Downstream 100 bases:
>100_bases GAGACTTTGAAAAAATGATAAATCCAATTTATTTAATTATTGCAGACCTTTTAGATAGATACATTGGAGAGCCTCCTGAA AAACTCCATCCTGTTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MDSSVLIQQCNEFLDGLSNFGDNFKKPFLEKENSVNELQKSLECNLCILENLREKMELQGFETPYIGVGQIKGGEDDDIY EIINYSSYLRRMVDEKKGSLERAKYAIVSHKIAIGNLLDEFGNKDILQNLPYNGSYKEHLSKIPPLFFKSYKNILSAFES EGFSKLRSSKIKGLEHAYPEKGVVSSITLSLVIIENGKRKFKRVKIEEEDYEGYIKRTYGDAIITSVKKNYSKNKLLNDQ YVKKTLTLAYFTTYLPEIKEKINLEVKESLSKEERCLIKKYSNICENFENDVYEGGIIDVRALEETKLKKMNIKTDLEEK GLYKNGKLLENLKKSLEIQNRIFESISVEIPIKKISKDLFMYYLLKSPDERSRSHMFSSILVTPSTSQLKWLDIEEIEPK KILDLKFMFEKELPKYEISLKNIGGVSIYLLYGMEKALEYGFEKTGIEDILKLIAVIEDIKENLKGKIDLKVLEKYCKIK KEKTKSFLNALGKL
Sequences:
>Translated_494_residues MDSSVLIQQCNEFLDGLSNFGDNFKKPFLEKENSVNELQKSLECNLCILENLREKMELQGFETPYIGVGQIKGGEDDDIY EIINYSSYLRRMVDEKKGSLERAKYAIVSHKIAIGNLLDEFGNKDILQNLPYNGSYKEHLSKIPPLFFKSYKNILSAFES EGFSKLRSSKIKGLEHAYPEKGVVSSITLSLVIIENGKRKFKRVKIEEEDYEGYIKRTYGDAIITSVKKNYSKNKLLNDQ YVKKTLTLAYFTTYLPEIKEKINLEVKESLSKEERCLIKKYSNICENFENDVYEGGIIDVRALEETKLKKMNIKTDLEEK GLYKNGKLLENLKKSLEIQNRIFESISVEIPIKKISKDLFMYYLLKSPDERSRSHMFSSILVTPSTSQLKWLDIEEIEPK KILDLKFMFEKELPKYEISLKNIGGVSIYLLYGMEKALEYGFEKTGIEDILKLIAVIEDIKENLKGKIDLKVLEKYCKIK KEKTKSFLNALGKL >Mature_494_residues MDSSVLIQQCNEFLDGLSNFGDNFKKPFLEKENSVNELQKSLECNLCILENLREKMELQGFETPYIGVGQIKGGEDDDIY EIINYSSYLRRMVDEKKGSLERAKYAIVSHKIAIGNLLDEFGNKDILQNLPYNGSYKEHLSKIPPLFFKSYKNILSAFES EGFSKLRSSKIKGLEHAYPEKGVVSSITLSLVIIENGKRKFKRVKIEEEDYEGYIKRTYGDAIITSVKKNYSKNKLLNDQ YVKKTLTLAYFTTYLPEIKEKINLEVKESLSKEERCLIKKYSNICENFENDVYEGGIIDVRALEETKLKKMNIKTDLEEK GLYKNGKLLENLKKSLEIQNRIFESISVEIPIKKISKDLFMYYLLKSPDERSRSHMFSSILVTPSTSQLKWLDIEEIEPK KILDLKFMFEKELPKYEISLKNIGGVSIYLLYGMEKALEYGFEKTGIEDILKLIAVIEDIKENLKGKIDLKVLEKYCKIK KEKTKSFLNALGKL
Specific function: Unknown
COG id: COG1771
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007503 [H]
Pfam domain/function: PF04409 DUF530 [H]
EC number: NA
Molecular weight: Translated: 57182; Mature: 57182
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSVLIQQCNEFLDGLSNFGDNFKKPFLEKENSVNELQKSLECNLCILENLREKMELQG CCCHHHHHHHHHHHHHHHHHCCHHHCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC FETPYIGVGQIKGGEDDDIYEIINYSSYLRRMVDEKKGSLERAKYAIVSHKIAIGNLLDE CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FGNKDILQNLPYNGSYKEHLSKIPPLFFKSYKNILSAFESEGFSKLRSSKIKGLEHAYPE HCCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC KGVVSSITLSLVIIENGKRKFKRVKIEEEDYEGYIKRTYGDAIITSVKKNYSKNKLLNDQ CCCHHHEEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHH YVKKTLTLAYFTTYLPEIKEKINLEVKESLSKEERCLIKKYSNICENFENDVYEGGIIDV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE RALEETKLKKMNIKTDLEEKGLYKNGKLLENLKKSLEIQNRIFESISVEIPIKKISKDLF EEHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH MYYLLKSPDERSRSHMFSSILVTPSTSQLKWLDIEEIEPKKILDLKFMFEKELPKYEISL HHHHHCCCCHHHHHHHHHHHEECCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEE KNIGGVSIYLLYGMEKALEYGFEKTGIEDILKLIAVIEDIKENLKGKIDLKVLEKYCKIK ECCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KEKTKSFLNALGKL HHHHHHHHHHHCCC >Mature Secondary Structure MDSSVLIQQCNEFLDGLSNFGDNFKKPFLEKENSVNELQKSLECNLCILENLREKMELQG CCCHHHHHHHHHHHHHHHHHCCHHHCCHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC FETPYIGVGQIKGGEDDDIYEIINYSSYLRRMVDEKKGSLERAKYAIVSHKIAIGNLLDE CCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH FGNKDILQNLPYNGSYKEHLSKIPPLFFKSYKNILSAFESEGFSKLRSSKIKGLEHAYPE HCCCHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC KGVVSSITLSLVIIENGKRKFKRVKIEEEDYEGYIKRTYGDAIITSVKKNYSKNKLLNDQ CCCHHHEEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHH YVKKTLTLAYFTTYLPEIKEKINLEVKESLSKEERCLIKKYSNICENFENDVYEGGIIDV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE RALEETKLKKMNIKTDLEEKGLYKNGKLLENLKKSLEIQNRIFESISVEIPIKKISKDLF EEHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH MYYLLKSPDERSRSHMFSSILVTPSTSQLKWLDIEEIEPKKILDLKFMFEKELPKYEISL HHHHHCCCCHHHHHHHHHHHEECCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEE KNIGGVSIYLLYGMEKALEYGFEKTGIEDILKLIAVIEDIKENLKGKIDLKVLEKYCKIK ECCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KEKTKSFLNALGKL HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]