Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is cca [H]

Identifier: 150398994

GI number: 150398994

Start: 283512

End: 284852

Strand: Reverse

Name: cca [H]

Synonym: Mevan_0240

Alternate gene names: 150398994

Gene position: 284852-283512 (Counterclockwise)

Preceding gene: 150398995

Following gene: 150398993

Centisome position: 16.56

GC content: 26.55

Gene sequence:

>1341_bases
TTGAAAGAAATACTTGAAAATTCTATGGGTATACAAAAAGTACTAAACGAAGTTTTAACTGATATCTCTCCAACAGATTC
AGAAAAAGAAGAATTAACGTTATTTTCTAATGCAGTACTACATAAATTAAAAAGTATTTCTGAATATCCCATCTTAGATA
TAATACAAGTTGGTTCTACAGCAAGAAATGCTAATTTAAAAAATGACCATGATATTGATATTTTTTTAAGATTTGAAAGA
AATACTGAGCGAGAAACCCTAAAAGAAGTAGGTTTACGGGTTGGAAAAGAAGTAATTGATTATTTTGGCGGAATATCTTG
GTTAGAATATGCTGAACATCCATATATATCTGGAAAAATTGGAAAATTTTCATTAGATATTGTTCCATGCTATAAAATCG
AAAACTGTGAAAAAATAATATCTGCCGTAGATAGAACGCCACTACATAATGAATTTTTAGTGTTGGCTAGTTTAAAAACA
GACATTTCAAATGAAGTCCGTCTTTTAAAAAAATTTTTAAAAGGACTTTCAATATATGGTTCAGACCTAAAAACTGCCGG
TTTTTCAGGATATTTATGCGAACTTTTAATATTAAAATATGGGAGTTTTTTAAATTTACTAAACGATGTAAAAACTTGGA
AACTTAAAAAAGTAATAGTTTTAGATGAAATTTACGAAATGTATGGTTTAAAAAATGACCATAAATTTTTAGAATTTAAT
GATTCACTTATTGTTTATGACCCTGTAGATTTAAATAGAAACGTTGCCGCTGCATTAAGCCTTGAAAACTATTGTAAATT
CATATTTTATTCTAAAATGTTTTTAATGAACCCAAATAAAGAATTTTTTTATAATTTTGAAAAAAAAACCATTAATAAAT
TAAATGAAAGAAGTCACGGGTATTTTTTAACTATTGAAATAAAACGTCCAGAAAACGTTGTTGAAGATATAGTTTATCCT
CAAATGGAAAAATTACAAAAAAGTATTAATAAGCTTATTAAAGAACATGATTTTGATTATTTAAGATATACCAATTTTGC
AGATGAAAAAGTCTGCTATCTTTCATGGGAGTTTTTAGTACACGAATTACCTGATGTAAAATTAAGGGTGGGCCCCCCAG
TTAGCAGTTCTTTTGGAGTTTTAAATTTTATAAAAAATAACGAAAAATATTTTGTTTCAGGGTGCAATGTTTGTGCATAC
AAAAACAGAAAATATAAAAATGTACAGATACTATTCAATAATATCGTAAATGGGAAATTAAAAGGTCAGATAACCTATCC
AAAATATATCTGTCCTGAAAATGCATTAATTAATATTGGAACTTTTGTAGAAAGAATTTAA

Upstream 100 bases:

>100_bases
TTACTGTCCAGTATAAAGGCCAAATCAAACATACGGTTTAATTGATTAAGTAGTGTTTATTTTTTTAGTATTTTTTTATT
TTTAACATAAGGTGGATATT

Downstream 100 bases:

>100_bases
ATTTAATTTGGGAAATCATGGACAGTAGTGTCTTGATACAGCAATGCAACGAATTTTTAGATGGGCTATCTAATTTTGGA
GATAATTTTAAAAAACCATT

Product: tRNA CCA-pyrophosphorylase

Products: NA

Alternate protein names: tRNA CCA-pyrophosphorylase; tRNA adenylyl-/cytidylyl- transferase; tRNA nucleotidyltransferase; tRNA-NT [H]

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MKEILENSMGIQKVLNEVLTDISPTDSEKEELTLFSNAVLHKLKSISEYPILDIIQVGSTARNANLKNDHDIDIFLRFER
NTERETLKEVGLRVGKEVIDYFGGISWLEYAEHPYISGKIGKFSLDIVPCYKIENCEKIISAVDRTPLHNEFLVLASLKT
DISNEVRLLKKFLKGLSIYGSDLKTAGFSGYLCELLILKYGSFLNLLNDVKTWKLKKVIVLDEIYEMYGLKNDHKFLEFN
DSLIVYDPVDLNRNVAAALSLENYCKFIFYSKMFLMNPNKEFFYNFEKKTINKLNERSHGYFLTIEIKRPENVVEDIVYP
QMEKLQKSINKLIKEHDFDYLRYTNFADEKVCYLSWEFLVHELPDVKLRVGPPVSSSFGVLNFIKNNEKYFVSGCNVCAY
KNRKYKNVQILFNNIVNGKLKGQITYPKYICPENALINIGTFVERI

Sequences:

>Translated_446_residues
MKEILENSMGIQKVLNEVLTDISPTDSEKEELTLFSNAVLHKLKSISEYPILDIIQVGSTARNANLKNDHDIDIFLRFER
NTERETLKEVGLRVGKEVIDYFGGISWLEYAEHPYISGKIGKFSLDIVPCYKIENCEKIISAVDRTPLHNEFLVLASLKT
DISNEVRLLKKFLKGLSIYGSDLKTAGFSGYLCELLILKYGSFLNLLNDVKTWKLKKVIVLDEIYEMYGLKNDHKFLEFN
DSLIVYDPVDLNRNVAAALSLENYCKFIFYSKMFLMNPNKEFFYNFEKKTINKLNERSHGYFLTIEIKRPENVVEDIVYP
QMEKLQKSINKLIKEHDFDYLRYTNFADEKVCYLSWEFLVHELPDVKLRVGPPVSSSFGVLNFIKNNEKYFVSGCNVCAY
KNRKYKNVQILFNNIVNGKLKGQITYPKYICPENALINIGTFVERI
>Mature_446_residues
MKEILENSMGIQKVLNEVLTDISPTDSEKEELTLFSNAVLHKLKSISEYPILDIIQVGSTARNANLKNDHDIDIFLRFER
NTERETLKEVGLRVGKEVIDYFGGISWLEYAEHPYISGKIGKFSLDIVPCYKIENCEKIISAVDRTPLHNEFLVLASLKT
DISNEVRLLKKFLKGLSIYGSDLKTAGFSGYLCELLILKYGSFLNLLNDVKTWKLKKVIVLDEIYEMYGLKNDHKFLEFN
DSLIVYDPVDLNRNVAAALSLENYCKFIFYSKMFLMNPNKEFFYNFEKKTINKLNERSHGYFLTIEIKRPENVVEDIVYP
QMEKLQKSINKLIKEHDFDYLRYTNFADEKVCYLSWEFLVHELPDVKLRVGPPVSSSFGVLNFIKNNEKYFVSGCNVCAY
KNRKYKNVQILFNNIVNGKLKGQITYPKYICPENALINIGTFVERI

Specific function: Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing

COG id: COG1746

COG function: function code J; tRNA nucleotidyltransferase (CCA-adding enzyme)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Archaeal CCA-adding enzyme subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008229
- InterPro:   IPR002934
- InterPro:   IPR011068
- InterPro:   IPR015329 [H]

Pfam domain/function: PF01909 NTP_transf_2; PF09249 tRNA_NucTransf2 [H]

EC number: =2.7.7.21; =2.7.7.25 [H]

Molecular weight: Translated: 51777; Mature: 51777

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEILENSMGIQKVLNEVLTDISPTDSEKEELTLFSNAVLHKLKSISEYPILDIIQVGST
CHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
ARNANLKNDHDIDIFLRFERNTERETLKEVGLRVGKEVIDYFGGISWLEYAEHPYISGKI
CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC
GKFSLDIVPCYKIENCEKIISAVDRTPLHNEFLVLASLKTDISNEVRLLKKFLKGLSIYG
CEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHCCC
SDLKTAGFSGYLCELLILKYGSFLNLLNDVKTWKLKKVIVLDEIYEMYGLKNDHKFLEFN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
DSLIVYDPVDLNRNVAAALSLENYCKFIFYSKMFLMNPNKEFFYNFEKKTINKLNERSHG
CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHEEECHHHHHHHHHCCCCC
YFLTIEIKRPENVVEDIVYPQMEKLQKSINKLIKEHDFDYLRYTNFADEKVCYLSWEFLV
EEEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEHHHHH
HELPDVKLRVGPPVSSSFGVLNFIKNNEKYFVSGCNVCAYKNRKYKNVQILFNNIVNGKL
HCCCCCEEEECCCCCCCCCHHHEEECCCEEEEECCCEEEECCCCCCCCEEEEEHHCCCEE
KGQITYPKYICPENALINIGTFVERI
EEEEECCCEECCCCCEEEHHHHHHCC
>Mature Secondary Structure
MKEILENSMGIQKVLNEVLTDISPTDSEKEELTLFSNAVLHKLKSISEYPILDIIQVGST
CHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC
ARNANLKNDHDIDIFLRFERNTERETLKEVGLRVGKEVIDYFGGISWLEYAEHPYISGKI
CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCC
GKFSLDIVPCYKIENCEKIISAVDRTPLHNEFLVLASLKTDISNEVRLLKKFLKGLSIYG
CEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHCHHHHHHHHHHHHHHHHCCC
SDLKTAGFSGYLCELLILKYGSFLNLLNDVKTWKLKKVIVLDEIYEMYGLKNDHKFLEFN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
DSLIVYDPVDLNRNVAAALSLENYCKFIFYSKMFLMNPNKEFFYNFEKKTINKLNERSHG
CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHEEECHHHHHHHHHCCCCC
YFLTIEIKRPENVVEDIVYPQMEKLQKSINKLIKEHDFDYLRYTNFADEKVCYLSWEFLV
EEEEEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEHHHHH
HELPDVKLRVGPPVSSSFGVLNFIKNNEKYFVSGCNVCAYKNRKYKNVQILFNNIVNGKL
HCCCCCEEEECCCCCCCCCHHHEEECCCEEEEECCCEEEECCCCCCCCEEEEEHHCCCEE
KGQITYPKYICPENALINIGTFVERI
EEEEECCCEECCCCCEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA