| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398843
Identifier: 150398843
GI number: 150398843
Start: 85261
End: 85878
Strand: Reverse
Name: 150398843
Synonym: Mevan_0084
Alternate gene names: NA
Gene position: 85878-85261 (Counterclockwise)
Preceding gene: 150398847
Following gene: 150398837
Centisome position: 4.99
GC content: 31.39
Gene sequence:
>618_bases ATGCACACTATTTTGACTATGGCAAAAATACTACTCGCAACCCTGTACTCATTTGAACCAATTATTGCTGCATCAACCAA AATAGGTGCAGATCGATTAATTCTTTTAGTCGATTATAAACCTGACAAAACGCAGCAAAAGTCCATTGATTTAATAAATG ATTCATTAGGTTCGGTTTTAAAAATAGATACAGTTAACACTGATGTATATGATATTGTAGAAGTTTCGAAAGAAACTGTG GAAATAATCGATTCACTATCTGACACTGATGAAATATATGTTGATATTACGGCCGGGAGAAAAACAAAAGCATTAGGTCT TTTGTTTGGTGCATACGCTAGAATTTCAAGAATTAAACGAATAATGTATGTGAAAGAAGAAAATAAGCAGCTTGTTTATC TTCCAAAATTATCTTATCAGATTACTCCTGCCCAGTACAAAATTATCGAATATATTAATAAAAATAAAATTTCATCAATG GCAGAATTTTCTGAAAACGTAGGTGTAAGTAAAGCAATGCTTTACAAACACGTAAAAGAGTTAAAAGATATGGATATCTT AGAAGAAACTCCTGATGGGTTAAAATTGACTGATTACGGGAGGATTGTTATATTATAG
Upstream 100 bases:
>100_bases TAGTAATTTTTTTAACATATTTTTATATTGTGTACCTAATTTATATATTTTTCTCATAATTATGAGAATTTTATTTAATT AGAAAAATTTATAAATAATT
Downstream 100 bases:
>100_bases TTTAATTTCAATTTCATTTAAAATGTCTTTTAATATTTTCAATTCTTCAGGGGTAATTGTAATTCCTTTACTCATTTTAG TATGGTCTTGACTCCATTCT
Product: CRISPR-associated DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MHTILTMAKILLATLYSFEPIIAASTKIGADRLILLVDYKPDKTQQKSIDLINDSLGSVLKIDTVNTDVYDIVEVSKETV EIIDSLSDTDEIYVDITAGRKTKALGLLFGAYARISRIKRIMYVKEENKQLVYLPKLSYQITPAQYKIIEYINKNKISSM AEFSENVGVSKAMLYKHVKELKDMDILEETPDGLKLTDYGRIVIL
Sequences:
>Translated_205_residues MHTILTMAKILLATLYSFEPIIAASTKIGADRLILLVDYKPDKTQQKSIDLINDSLGSVLKIDTVNTDVYDIVEVSKETV EIIDSLSDTDEIYVDITAGRKTKALGLLFGAYARISRIKRIMYVKEENKQLVYLPKLSYQITPAQYKIIEYINKNKISSM AEFSENVGVSKAMLYKHVKELKDMDILEETPDGLKLTDYGRIVIL >Mature_205_residues MHTILTMAKILLATLYSFEPIIAASTKIGADRLILLVDYKPDKTQQKSIDLINDSLGSVLKIDTVNTDVYDIVEVSKETV EIIDSLSDTDEIYVDITAGRKTKALGLLFGAYARISRIKRIMYVKEENKQLVYLPKLSYQITPAQYKIIEYINKNKISSM AEFSENVGVSKAMLYKHVKELKDMDILEETPDGLKLTDYGRIVIL
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23202; Mature: 23202
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTILTMAKILLATLYSFEPIIAASTKIGADRLILLVDYKPDKTQQKSIDLINDSLGSVL CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEE KIDTVNTDVYDIVEVSKETVEIIDSLSDTDEIYVDITAGRKTKALGLLFGAYARISRIKR EEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH IMYVKEENKQLVYLPKLSYQITPAQYKIIEYINKNKISSMAEFSENVGVSKAMLYKHVKE HHEEEECCCEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LKDMDILEETPDGLKLTDYGRIVIL HHCCHHHHCCCCCCEEECCCCEEEC >Mature Secondary Structure MHTILTMAKILLATLYSFEPIIAASTKIGADRLILLVDYKPDKTQQKSIDLINDSLGSVL CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEE KIDTVNTDVYDIVEVSKETVEIIDSLSDTDEIYVDITAGRKTKALGLLFGAYARISRIKR EEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH IMYVKEENKQLVYLPKLSYQITPAQYKIIEYINKNKISSMAEFSENVGVSKAMLYKHVKE HHEEEECCCEEEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LKDMDILEETPDGLKLTDYGRIVIL HHCCHHHHCCCCCCEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA