| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150398837
Identifier: 150398837
GI number: 150398837
Start: 77008
End: 77439
Strand: Reverse
Name: 150398837
Synonym: Mevan_0078
Alternate gene names: NA
Gene position: 77439-77008 (Counterclockwise)
Preceding gene: 150398843
Following gene: 150398836
Centisome position: 4.5
GC content: 24.31
Gene sequence:
>432_bases GTGAATTATTTTTTATGTATTACAACAGAAGAAAATTGGAATATAATAAAAGAAAAAAAAATATGGGGGGTTTCTAAAAA ATATCAAAATACAATTTCAAAGGTAAATTTAGGAGATTATTTAATAATTTACGAAATGGGAAAACAAGGAAAAGAGCCAA AACCTCAATATATTAGGGCAATTTATGAAGTAGTTTCAGAGATTAAAGAAGATAATAAAAAATTGTTTGAATCATACAGT CCAAATGAAACATATCCATTAAGGATTAAGTTAAAAGAAGTTAAAATATTTGAAAAACCGATTTTGTTTAAAGAATTAGT TCCAGAAATGGATTTTATTACAAATAAAAAATTCTGGTCAGGTTCATTAAGACGGGCAATGGCACAGATTAGTGAAAAAG ATTATGAAAAAATTGTAAATTTTAAAGAATAA
Upstream 100 bases:
>100_bases CATATATAGTTATAATCTTCTTATTTTAAACCATATCAAAACCAATCATTTTAAATTCTTTTTTAAACATAATCTAATTA ACAAATTTTAAGGGGATAAC
Downstream 100 bases:
>100_bases TTTAGTTTTTCTTTTCTAATCTTTATTTAAAGGAGTTAAATTTAAAGGAGTTAAAATATGGAAACCATAATTTTATTTGA TACAAGATATGGAACAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MNYFLCITTEENWNIIKEKKIWGVSKKYQNTISKVNLGDYLIIYEMGKQGKEPKPQYIRAIYEVVSEIKEDNKKLFESYS PNETYPLRIKLKEVKIFEKPILFKELVPEMDFITNKKFWSGSLRRAMAQISEKDYEKIVNFKE
Sequences:
>Translated_143_residues MNYFLCITTEENWNIIKEKKIWGVSKKYQNTISKVNLGDYLIIYEMGKQGKEPKPQYIRAIYEVVSEIKEDNKKLFESYS PNETYPLRIKLKEVKIFEKPILFKELVPEMDFITNKKFWSGSLRRAMAQISEKDYEKIVNFKE >Mature_143_residues MNYFLCITTEENWNIIKEKKIWGVSKKYQNTISKVNLGDYLIIYEMGKQGKEPKPQYIRAIYEVVSEIKEDNKKLFESYS PNETYPLRIKLKEVKIFEKPILFKELVPEMDFITNKKFWSGSLRRAMAQISEKDYEKIVNFKE
Specific function: Unknown
COG id: COG1673
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0310 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002740 - InterPro: IPR015947 - InterPro: IPR022996 [H]
Pfam domain/function: PF01878 DUF55 [H]
EC number: NA
Molecular weight: Translated: 17149; Mature: 17149
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYFLCITTEENWNIIKEKKIWGVSKKYQNTISKVNLGDYLIIYEMGKQGKEPKPQYIRA CCEEEEEEECCCCCEEEHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHH IYEVVSEIKEDNKKLFESYSPNETYPLRIKLKEVKIFEKPILFKELVPEMDFITNKKFWS HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHHCCHHHHHHCCHHHHHCCCCCCC GSLRRAMAQISEKDYEKIVNFKE HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNYFLCITTEENWNIIKEKKIWGVSKKYQNTISKVNLGDYLIIYEMGKQGKEPKPQYIRA CCEEEEEEECCCCCEEEHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHH IYEVVSEIKEDNKKLFESYSPNETYPLRIKLKEVKIFEKPILFKELVPEMDFITNKKFWS HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHHCCHHHHHHCCHHHHHCCCCCCC GSLRRAMAQISEKDYEKIVNFKE HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]