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The map label for this gene is tnpR [H]

Identifier: 150398847

GI number: 150398847

Start: 94332

End: 94931

Strand: Reverse

Name: tnpR [H]

Synonym: Mevan_0088

Alternate gene names: 150398847

Gene position: 94931-94332 (Counterclockwise)

Preceding gene: 150398848

Following gene: 150398843

Centisome position: 5.52

GC content: 33.0

Gene sequence:

>600_bases
ATGCCGGGAAATGAAATGATATTTGGTTATGCCAGGGTTAGCACTCAAGATCAAAATGTGGATCGTCAACTAGATGAATT
AAAAGCAGCAGGCTGTCAAAAAATATTTTACGAAAAAATATCCGGGACAAAAATAGAACGGCCAGAATTTTTGAGAATGC
TTGATCAGGTTCGATCAGGAGATTTAATAATAATCACCGAATTAACGAGACTTTCAAGGTCGACTAAGGATTTACTCAAT
GTAGTTGAAATGCTTGAAGAAAAAGGTGTTTCAATAAAATCATTGAAGGAATCATGGTTGGATACCTCTTCAGCACATGG
TAAATTATTATTTACTTTTTTTGCAGGAATTTCTCAATTTGAAAGAGATATTATTTCAGAACGAGTAAAGTCGGGACTAA
AAGCTGCAAGAGCACGTGGTAGAAAAGGTGGAAGAAAACCTGCTGATCCAAAAAACGTTGACATTGCAGTTCGAATGTGG
AAAAGTAAAGAATATTCAATTAATGAAATCTTAAAAACGTGTGGAATTTCTAGAAGAACTTTGTATAAATATTTAAAACA
AGATGAAGACTGCAGAAAAATTATTGAAAAAATAATTTGA

Upstream 100 bases:

>100_bases
ATATTATTCTTTGGATTTTTAGTATACTTTCTGGTTTACTTATTAATGTTTATATCTGATTACGGCTATAACTAAAGTAT
ACTCAATTTAGGGGATATTT

Downstream 100 bases:

>100_bases
ATAATGTTTACGTATTTAAAAAATTTAATAAGAAATAAATGGATCAGCAGTTTATTTGCGAATTTTAGCCAACTTATGCC
CTTTTGAAATATCCTGCAAT

Product: resolvase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MPGNEMIFGYARVSTQDQNVDRQLDELKAAGCQKIFYEKISGTKIERPEFLRMLDQVRSGDLIIITELTRLSRSTKDLLN
VVEMLEEKGVSIKSLKESWLDTSSAHGKLLFTFFAGISQFERDIISERVKSGLKAARARGRKGGRKPADPKNVDIAVRMW
KSKEYSINEILKTCGISRRTLYKYLKQDEDCRKIIEKII

Sequences:

>Translated_199_residues
MPGNEMIFGYARVSTQDQNVDRQLDELKAAGCQKIFYEKISGTKIERPEFLRMLDQVRSGDLIIITELTRLSRSTKDLLN
VVEMLEEKGVSIKSLKESWLDTSSAHGKLLFTFFAGISQFERDIISERVKSGLKAARARGRKGGRKPADPKNVDIAVRMW
KSKEYSINEILKTCGISRRTLYKYLKQDEDCRKIIEKII
>Mature_198_residues
PGNEMIFGYARVSTQDQNVDRQLDELKAAGCQKIFYEKISGTKIERPEFLRMLDQVRSGDLIIITELTRLSRSTKDLLNV
VEMLEEKGVSIKSLKESWLDTSSAHGKLLFTFFAGISQFERDIISERVKSGLKAARARGRKGGRKPADPKNVDIAVRMWK
SKEYSINEILKTCGISRRTLYKYLKQDEDCRKIIEKII

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787404, Length=142, Percent_Identity=46.4788732394366, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1787827, Length=183, Percent_Identity=34.9726775956284, Blast_Score=107, Evalue=4e-25,
Organism=Escherichia coli, GI1787638, Length=184, Percent_Identity=34.7826086956522, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22824; Mature: 22693

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGNEMIFGYARVSTQDQNVDRQLDELKAAGCQKIFYEKISGTKIERPEFLRMLDQVRSG
CCCCCEEEEEHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
DLIIITELTRLSRSTKDLLNVVEMLEEKGVSIKSLKESWLDTSSAHGKLLFTFFAGISQF
CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ERDIISERVKSGLKAARARGRKGGRKPADPKNVDIAVRMWKSKEYSINEILKTCGISRRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCHHH
LYKYLKQDEDCRKIIEKII
HHHHHCCCHHHHHHHHHHC
>Mature Secondary Structure 
PGNEMIFGYARVSTQDQNVDRQLDELKAAGCQKIFYEKISGTKIERPEFLRMLDQVRSG
CCCCEEEEEHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
DLIIITELTRLSRSTKDLLNVVEMLEEKGVSIKSLKESWLDTSSAHGKLLFTFFAGISQF
CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ERDIISERVKSGLKAARARGRKGGRKPADPKNVDIAVRMWKSKEYSINEILKTCGISRRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCCHHH
LYKYLKQDEDCRKIIEKII
HHHHHCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2997130 [H]