Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150010164

Identifier: 150010164

GI number: 150010164

Start: 4395496

End: 4396218

Strand: Direct

Name: 150010164

Synonym: BDI_3587

Alternate gene names: NA

Gene position: 4395496-4396218 (Clockwise)

Preceding gene: 150010163

Following gene: 150010165

Centisome position: 91.36

GC content: 46.75

Gene sequence:

>723_bases
ATGAGATTGGTGTATATTTATCATAGCGGATTCGCTTTGGAAGCGGATGGCTTTTCGATCTTGATCGATTATTTCAAGGA
TAGCGATCCGGACCCGGCCAAGGGATACGTGCGTAGCGAACTCTTGAAGCGTGCGGGCACATTATATATATTAGCGTCGC
ATTTCCATCCGGATCATTTTAATCCGGAAGTATTGAAATGGAAAGAGCAGAAGCCGGATATCAAATATATCTTTTCCAAG
GATATATTGAAGCGTCGGAGGGCCAAGGCTGATGATGCTATTTATTTGAAGAAGGGGGATGCCTATCAAGATGAACTTCT
GACCATCAAGGCATTTGGTTCCACGGATGTGGGGATCTCTTTCCTGATAGAGACAGAAGGCAGACGGATCTTCCATGCCG
GCGACTTGAATAATTGGCATTGGAAAGACGAGTCCACCCCGCAAGAGGTAGCCGAGGCTGAGGGTAATTACTTGAAGGAA
CTGGATATAATAGCGACAGAAACCTCTGTGATGGATCTCGTCATGTTCCCGGTCGATCCTCGTTTGAGTACCGATTTCAT
GAGGGGCGCCCAGCAATTTATCGATCGTATAAAAACAAGCGTATTTGTCCCGATGCACTTTTGGGAACGTCCGGCGGAGG
TTATGGCTTTCGGCCCTTACGCCGAATCGAAAGGATGTCGTTATATCGTATTGTCTGTTCCGGGAGAAGGGACGGATATA
TAA

Upstream 100 bases:

>100_bases
CGGGCATGTGATATGTCCGGCCTTTTGTATATTTGTACCGTGAATTCAACAACCCGGTGAGGTTCGGTGTTCTTAAGATA
AACAATAAATGAGGATCATT

Downstream 100 bases:

>100_bases
TATATTATTAATGTATAGGTTATTTTAAACGCATAAATTTATTAGGTATGGAAGTTAAAGGTAGATTTGACCATTTCAAT
ATTAATGTATTGGATTTGGA

Product: putative metal dependent hydrolase

Products: NA

Alternate protein names: Hydrolase; SWF/SNF Family Helicase

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRLVYIYHSGFALEADGFSILIDYFKDSDPDPAKGYVRSELLKRAGTLYILASHFHPDHFNPEVLKWKEQKPDIKYIFSK
DILKRRRAKADDAIYLKKGDAYQDELLTIKAFGSTDVGISFLIETEGRRIFHAGDLNNWHWKDESTPQEVAEAEGNYLKE
LDIIATETSVMDLVMFPVDPRLSTDFMRGAQQFIDRIKTSVFVPMHFWERPAEVMAFGPYAESKGCRYIVLSVPGEGTDI

Sequences:

>Translated_240_residues
MRLVYIYHSGFALEADGFSILIDYFKDSDPDPAKGYVRSELLKRAGTLYILASHFHPDHFNPEVLKWKEQKPDIKYIFSK
DILKRRRAKADDAIYLKKGDAYQDELLTIKAFGSTDVGISFLIETEGRRIFHAGDLNNWHWKDESTPQEVAEAEGNYLKE
LDIIATETSVMDLVMFPVDPRLSTDFMRGAQQFIDRIKTSVFVPMHFWERPAEVMAFGPYAESKGCRYIVLSVPGEGTDI
>Mature_240_residues
MRLVYIYHSGFALEADGFSILIDYFKDSDPDPAKGYVRSELLKRAGTLYILASHFHPDHFNPEVLKWKEQKPDIKYIFSK
DILKRRRAKADDAIYLKKGDAYQDELLTIKAFGSTDVGISFLIETEGRRIFHAGDLNNWHWKDESTPQEVAEAEGNYLKE
LDIIATETSVMDLVMFPVDPRLSTDFMRGAQQFIDRIKTSVFVPMHFWERPAEVMAFGPYAESKGCRYIVLSVPGEGTDI

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27541; Mature: 27541

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVYIYHSGFALEADGFSILIDYFKDSDPDPAKGYVRSELLKRAGTLYILASHFHPDHF
CEEEEEEECCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCC
NPEVLKWKEQKPDIKYIFSKDILKRRRAKADDAIYLKKGDAYQDELLTIKAFGSTDVGIS
CHHHEEECCCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEE
FLIETEGRRIFHAGDLNNWHWKDESTPQEVAEAEGNYLKELDIIATETSVMDLVMFPVDP
EEEEECCCEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEHEEEEEECHHEEEEEEECCCC
RLSTDFMRGAQQFIDRIKTSVFVPMHFWERPAEVMAFGPYAESKGCRYIVLSVPGEGTDI
CCCHHHHHHHHHHHHHHHHEEEEEHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MRLVYIYHSGFALEADGFSILIDYFKDSDPDPAKGYVRSELLKRAGTLYILASHFHPDHF
CEEEEEEECCEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCC
NPEVLKWKEQKPDIKYIFSKDILKRRRAKADDAIYLKKGDAYQDELLTIKAFGSTDVGIS
CHHHEEECCCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCCCEE
FLIETEGRRIFHAGDLNNWHWKDESTPQEVAEAEGNYLKELDIIATETSVMDLVMFPVDP
EEEEECCCEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEHEEEEEECHHEEEEEEECCCC
RLSTDFMRGAQQFIDRIKTSVFVPMHFWERPAEVMAFGPYAESKGCRYIVLSVPGEGTDI
CCCHHHHHHHHHHHHHHHHEEEEEHHHHCCCCCEEEECCCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA