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The map label for this gene is rfbU [H]

Identifier: 150009407

GI number: 150009407

Start: 3358011

End: 3359144

Strand: Direct

Name: rfbU [H]

Synonym: BDI_2815

Alternate gene names: 150009407

Gene position: 3358011-3359144 (Clockwise)

Preceding gene: 150009406

Following gene: 150009408

Centisome position: 69.79

GC content: 47.71

Gene sequence:

>1134_bases
ATGAAGATCGCTTTCGACGCAAAACGGATTACGCATAACGCTACCGGACTGGGTAATTATAGCCGGTTCGTAGTGAATAG
TTTGTCCGCTTCTTTCCCGGAGCATACCTATCAACTCTATACGCCGGGCAAAGGCAAAGAAGCGTTACGGAAACGGATCG
AGGAGCGTCCAAGTGTCTCATTCCATTATCCGGAAGGCAGGTTCGATAAACTATTTCCGTCTTTATGGCGTACCTCGGGC
CTAACGGCTACGCTTCGAAAAGAGCACGTAGATCTGTTCCATGGCTTGAGTAATGAGATTCCTATGAATCTAAAACAGAA
CGGAATCCCAGCGGTCGTAACGATACATGACTTGATCTTCTTGCGTTACCCGCAGCTTTATAAACCGATCGATCGTTCCA
TCTATACCTACAAATTCAAGCAAGCTTGTTTACGGTCGGACAAGATCATAGCGATCAGCCGACAGACGATGCGAGACATC
CGGGACTTCTTCCACATTCCGGAAAGCAAGATCGAGGTTGTTTACCAAGGTTGTGACCCGATATTCGGGCAAGCGGTTCA
AGAAGACGTGAAATCGTCCGTACGCGAGAAATATCAGATAAACGGGCCTTATATATTATATGTAGGGAGCATCGAGGAAC
GGAAAAATTTATTGCTTCTGGTAAAAGCCCTGAAAAAGCTGAAAGAAGATATCTCCGTGATCGCTATCGGTAAGCATACG
CCTTATACGGACACGGTAGAGACTTATATCCGGGAAAACAACCTGTCCGGTCGCGTCCATATCTTGACTCATATACCTTT
TAACGAATTAGCCGCTTTCTATCAGATGGCGACCTTATTTGTCTATCCCTCGTTTTTCGAAGGATTCGGTATCCCGATCT
TAGAAGCCCAGCTTGCCGGTATTCCGGTGATAGCGGCTACCGGTTCTTGTCTGGAAGAGGCGGGCGGACCGTCCGCTTTA
TATACCGATCCAAGAAACGAACAAGAACTGCGCGGCTTGATAGAGTCCGTATTGAACGAGCCGAAGCTGGCCGAATCCAT
GCGTTCCGGCGGACGAGAGAATATACGGCGATTCATGCCCGACGTATTAGCGGCTCATTTCATGCGAGTATACGAGAATA
TCTCACGATCTTAG

Upstream 100 bases:

>100_bases
CATCCGAATGGGGGGAGATCCCGGCGGATTTCGGAAGGAAATGAGGTAAAGGTAATTAAAATTATATCGTATATTTGCCC
AATATATCGAATTCAAGCCT

Downstream 100 bases:

>100_bases
CAAATCCATTTTATCCATACACAATGAATATACTTTTAGTCTATAAAGAAGCCGATATAGCAACCTACAAAATGCTGGAA
GGATTGTCCAAGCTTGAGGA

Product: mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKIAFDAKRITHNATGLGNYSRFVVNSLSASFPEHTYQLYTPGKGKEALRKRIEERPSVSFHYPEGRFDKLFPSLWRTSG
LTATLRKEHVDLFHGLSNEIPMNLKQNGIPAVVTIHDLIFLRYPQLYKPIDRSIYTYKFKQACLRSDKIIAISRQTMRDI
RDFFHIPESKIEVVYQGCDPIFGQAVQEDVKSSVREKYQINGPYILYVGSIEERKNLLLLVKALKKLKEDISVIAIGKHT
PYTDTVETYIRENNLSGRVHILTHIPFNELAAFYQMATLFVYPSFFEGFGIPILEAQLAGIPVIAATGSCLEEAGGPSAL
YTDPRNEQELRGLIESVLNEPKLAESMRSGGRENIRRFMPDVLAAHFMRVYENISRS

Sequences:

>Translated_377_residues
MKIAFDAKRITHNATGLGNYSRFVVNSLSASFPEHTYQLYTPGKGKEALRKRIEERPSVSFHYPEGRFDKLFPSLWRTSG
LTATLRKEHVDLFHGLSNEIPMNLKQNGIPAVVTIHDLIFLRYPQLYKPIDRSIYTYKFKQACLRSDKIIAISRQTMRDI
RDFFHIPESKIEVVYQGCDPIFGQAVQEDVKSSVREKYQINGPYILYVGSIEERKNLLLLVKALKKLKEDISVIAIGKHT
PYTDTVETYIRENNLSGRVHILTHIPFNELAAFYQMATLFVYPSFFEGFGIPILEAQLAGIPVIAATGSCLEEAGGPSAL
YTDPRNEQELRGLIESVLNEPKLAESMRSGGRENIRRFMPDVLAAHFMRVYENISRS
>Mature_377_residues
MKIAFDAKRITHNATGLGNYSRFVVNSLSASFPEHTYQLYTPGKGKEALRKRIEERPSVSFHYPEGRFDKLFPSLWRTSG
LTATLRKEHVDLFHGLSNEIPMNLKQNGIPAVVTIHDLIFLRYPQLYKPIDRSIYTYKFKQACLRSDKIIAISRQTMRDI
RDFFHIPESKIEVVYQGCDPIFGQAVQEDVKSSVREKYQINGPYILYVGSIEERKNLLLLVKALKKLKEDISVIAIGKHT
PYTDTVETYIRENNLSGRVHILTHIPFNELAAFYQMATLFVYPSFFEGFGIPILEAQLAGIPVIAATGSCLEEAGGPSAL
YTDPRNEQELRGLIESVLNEPKLAESMRSGGRENIRRFMPDVLAAHFMRVYENISRS

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42983; Mature: 42983

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAFDAKRITHNATGLGNYSRFVVNSLSASFPEHTYQLYTPGKGKEALRKRIEERPSVS
CCCEECHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCE
FHYPEGRFDKLFPSLWRTSGLTATLRKEHVDLFHGLSNEIPMNLKQNGIPAVVTIHDLIF
EECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH
LRYPQLYKPIDRSIYTYKFKQACLRSDKIIAISRQTMRDIRDFFHIPESKIEVVYQGCDP
HHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCHHHHEEECCCCH
IFGQAVQEDVKSSVREKYQINGPYILYVGSIEERKNLLLLVKALKKLKEDISVIAIGKHT
HHHHHHHHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
PYTDTVETYIRENNLSGRVHILTHIPFNELAAFYQMATLFVYPSFFEGFGIPILEAQLAG
CCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
IPVIAATGSCLEEAGGPSALYTDPRNEQELRGLIESVLNEPKLAESMRSGGRENIRRFMP
CCEEECCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH
DVLAAHFMRVYENISRS
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIAFDAKRITHNATGLGNYSRFVVNSLSASFPEHTYQLYTPGKGKEALRKRIEERPSVS
CCCEECHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHCCCCE
FHYPEGRFDKLFPSLWRTSGLTATLRKEHVDLFHGLSNEIPMNLKQNGIPAVVTIHDLIF
EECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHH
LRYPQLYKPIDRSIYTYKFKQACLRSDKIIAISRQTMRDIRDFFHIPESKIEVVYQGCDP
HHCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCHHHHEEECCCCH
IFGQAVQEDVKSSVREKYQINGPYILYVGSIEERKNLLLLVKALKKLKEDISVIAIGKHT
HHHHHHHHHHHHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCCC
PYTDTVETYIRENNLSGRVHILTHIPFNELAAFYQMATLFVYPSFFEGFGIPILEAQLAG
CCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
IPVIAATGSCLEEAGGPSALYTDPRNEQELRGLIESVLNEPKLAESMRSGGRENIRRFMP
CCEEECCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH
DVLAAHFMRVYENISRS
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]