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The map label for this gene is lpsE [H]

Identifier: 150009408

GI number: 150009408

Start: 3359168

End: 3360232

Strand: Direct

Name: lpsE [H]

Synonym: BDI_2816

Alternate gene names: 150009408

Gene position: 3359168-3360232 (Clockwise)

Preceding gene: 150009407

Following gene: 150009415

Centisome position: 69.82

GC content: 46.95

Gene sequence:

>1065_bases
ATGAATATACTTTTAGTCTATAAAGAAGCCGATATAGCAACCTACAAAATGCTGGAAGGATTGTCCAAGCTTGAGGACTT
CAACATCTATATCGCTTCTCCCCAATCGTATACCGACAAAAAGATCTATGGGAATTGTACACCTTTGGATCTGCCGGTCA
TTACCTCGAAGTTCAACTGGAACGTTATTCGTGCCCTGCGCAAAATCATCAAGACTTATCGGATCGACCTTATCTACTCA
CCGAGTAGTTCCGGTTTATCAAACGCTCTATTCGCTTCCATAGGCACACGGGCGAAGAATATCGCATACCGAGGTACGCA
GGCTAAATTGAAGCGGTTCGATCCGACCTATTATCTAGGCATATTAAATCCCGCCGTGGAGCATGTCGTATGCGAGACCA
AAGATATCGAGGAATATCTCTCCCGATTCATCGCACGAAAAAGACTAACGACCAGCACAAAGCCATTTGATATCGATTGG
ATCAAGGAGGCAGTCCGTACGCCCAAACAAGCAGACGATATTCCGGACGACGCCTTTCGTTGCATCTATATCGGAGCGAC
GAAGAACAGGCCGTTCAAAGGCTTAACCGATTTGATTGATGCGTTTATCTTATTGGATGATCCACGGGTACATCTTACAA
TCGTGGGAGAATATGGGGAAAATGATTTCCAATTAGCCCAACAGTCGAAGGTAAGCGCACAAATTCATTTTCTGGGACAG
CGTTCCGACGCCATCTCTTTTCTGGTCACGTCCCAGTTGTTTATACTTCCCTCGCACCGGGATGCCTCCCCAAGAGTCGT
GCGAGAGGCTATGGCTTGTTCAGTACCTTGTATCGTAACAGACATACCGGGAGCAAGAGACTTAATCATAGACGGAGTCA
CCGGATTGTTAGTGCCGCCTTCTTCTCCTCAACAAATGGCGGCGTCTATCCTCTCGCTTATCGATAACCCGAAGCGATTG
GAAGCGTTCGCCAAGGCCTCACGTGAGCATATCATCCAAGATTTCAGCGTAAAGGCTTATACAGACGGCTTCGCCACGTT
ATTCAGGTCGATCAAGAAAGCATAG

Upstream 100 bases:

>100_bases
AGAATATACGGCGATTCATGCCCGACGTATTAGCGGCTCATTTCATGCGAGTATACGAGAATATCTCACGATCTTAGCAA
ATCCATTTTATCCATACACA

Downstream 100 bases:

>100_bases
ATTATTTACAGATTCAGAAACAACGGATATAAGCTAATGAATAGCTATCATAAAGATGGTCCTTCATTCCATGTTTATAT
TGGAAGGACAGGATATTTTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNILLVYKEADIATYKMLEGLSKLEDFNIYIASPQSYTDKKIYGNCTPLDLPVITSKFNWNVIRALRKIIKTYRIDLIYS
PSSSGLSNALFASIGTRAKNIAYRGTQAKLKRFDPTYYLGILNPAVEHVVCETKDIEEYLSRFIARKRLTTSTKPFDIDW
IKEAVRTPKQADDIPDDAFRCIYIGATKNRPFKGLTDLIDAFILLDDPRVHLTIVGEYGENDFQLAQQSKVSAQIHFLGQ
RSDAISFLVTSQLFILPSHRDASPRVVREAMACSVPCIVTDIPGARDLIIDGVTGLLVPPSSPQQMAASILSLIDNPKRL
EAFAKASREHIIQDFSVKAYTDGFATLFRSIKKA

Sequences:

>Translated_354_residues
MNILLVYKEADIATYKMLEGLSKLEDFNIYIASPQSYTDKKIYGNCTPLDLPVITSKFNWNVIRALRKIIKTYRIDLIYS
PSSSGLSNALFASIGTRAKNIAYRGTQAKLKRFDPTYYLGILNPAVEHVVCETKDIEEYLSRFIARKRLTTSTKPFDIDW
IKEAVRTPKQADDIPDDAFRCIYIGATKNRPFKGLTDLIDAFILLDDPRVHLTIVGEYGENDFQLAQQSKVSAQIHFLGQ
RSDAISFLVTSQLFILPSHRDASPRVVREAMACSVPCIVTDIPGARDLIIDGVTGLLVPPSSPQQMAASILSLIDNPKRL
EAFAKASREHIIQDFSVKAYTDGFATLFRSIKKA
>Mature_354_residues
MNILLVYKEADIATYKMLEGLSKLEDFNIYIASPQSYTDKKIYGNCTPLDLPVITSKFNWNVIRALRKIIKTYRIDLIYS
PSSSGLSNALFASIGTRAKNIAYRGTQAKLKRFDPTYYLGILNPAVEHVVCETKDIEEYLSRFIARKRLTTSTKPFDIDW
IKEAVRTPKQADDIPDDAFRCIYIGATKNRPFKGLTDLIDAFILLDDPRVHLTIVGEYGENDFQLAQQSKVSAQIHFLGQ
RSDAISFLVTSQLFILPSHRDASPRVVREAMACSVPCIVTDIPGARDLIIDGVTGLLVPPSSPQQMAASILSLIDNPKRL
EAFAKASREHIIQDFSVKAYTDGFATLFRSIKKA

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 39694; Mature: 39694

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLVYKEADIATYKMLEGLSKLEDFNIYIASPQSYTDKKIYGNCTPLDLPVITSKFNW
CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCCCCCCEEECCCCH
NVIRALRKIIKTYRIDLIYSPSSSGLSNALFASIGTRAKNIAYRGTQAKLKRFDPTYYLG
HHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCHHHHEEECCCHHHHHHCCCEEEEE
ILNPAVEHVVCETKDIEEYLSRFIARKRLTTSTKPFDIDWIKEAVRTPKQADDIPDDAFR
ECCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEE
CIYIGATKNRPFKGLTDLIDAFILLDDPRVHLTIVGEYGENDFQLAQQSKVSAQIHFLGQ
EEEEECCCCCCCCHHHHHHHHHEEECCCEEEEEEEECCCCCHHHHHHHHCCEEEEEEECC
RSDAISFLVTSQLFILPSHRDASPRVVREAMACSVPCIVTDIPGARDLIIDGVTGLLVPP
CCHHHHHEEECEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCHHEEEECCCEEEECC
SSPQQMAASILSLIDNPKRLEAFAKASREHIIQDFSVKAYTDGFATLFRSIKKA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MNILLVYKEADIATYKMLEGLSKLEDFNIYIASPQSYTDKKIYGNCTPLDLPVITSKFNW
CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEECCCCCCCCCEEECCCCH
NVIRALRKIIKTYRIDLIYSPSSSGLSNALFASIGTRAKNIAYRGTQAKLKRFDPTYYLG
HHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCHHHHEEECCCHHHHHHCCCEEEEE
ILNPAVEHVVCETKDIEEYLSRFIARKRLTTSTKPFDIDWIKEAVRTPKQADDIPDDAFR
ECCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEE
CIYIGATKNRPFKGLTDLIDAFILLDDPRVHLTIVGEYGENDFQLAQQSKVSAQIHFLGQ
EEEEECCCCCCCCHHHHHHHHHEEECCCEEEEEEEECCCCCHHHHHHHHCCEEEEEEECC
RSDAISFLVTSQLFILPSHRDASPRVVREAMACSVPCIVTDIPGARDLIIDGVTGLLVPP
CCHHHHHEEECEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCHHEEEECCCEEEECC
SSPQQMAASILSLIDNPKRLEAFAKASREHIIQDFSVKAYTDGFATLFRSIKKA
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]