| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008731
Identifier: 150008731
GI number: 150008731
Start: 2502338
End: 2503456
Strand: Direct
Name: 150008731
Synonym: BDI_2121
Alternate gene names: NA
Gene position: 2502338-2503456 (Clockwise)
Preceding gene: 150008728
Following gene: 150008732
Centisome position: 52.01
GC content: 48.97
Gene sequence:
>1119_bases ATGAATACATCCAAAGTCTACTTTACTAATTTACGCACGACCCCCAGCAGCAACCTGCTGGATAAGATGGAACGTCTGGT AAAACGTGCCGGTATCGCCAATATCGACTTCAAAAATCAATTTGTAGCCATTAAGATCCACTTTGGCGAACCGGGGAATT TGGCATACATTCGTCCTAATTACGCCGCTCGCTTGGTAAGCCTGTTACGTGAATTAGGCGCAAAACCGTTCCTTACCGAT TGTAACACCTTATACTCGGGCCGTCGCTCCAACGCTGTCGATCATCTTCAAAGCGCCATGGAAAATGGGTTCAATCCCAT GTCCGCCGGTTGCAACGTTATCATCGCCGATGGCGTGAAAGGTACGGACTACCGGGAAATCGAGATTGACGGGCAATATT GCAAGGCCCCGAAAATAGGTGCCGCTATCGCCGATGCCGATATCATCATTTCCATGAACCATTTCAAAGGTCACGAGCAA GCCGGTTTCGGCGGTGCGCTGAAAAACCTCGGGATGGGATGCGCCAGCGTAGGCGGTAAACTGGAATTACATTGCGCCTC ACAACCCCGTATCGATACGGAGGCTTGTAAAGGCTGTAACATCTGTGTAAAGCACTGCGCTCACGATGCCATCCATTTGA ATAACAACCGAAAGGCCGAAATTGATTACGAGCGTTGTGTAGGTTGCGGGCAATGTGTGGCTCTTTGCCAGTACGACGGT GCCGTAATGGGCGAAGGTGATACTTCCGAGCGATTGAATTACAAGATCGACGAGTACACGAAAGCCGTATTAGCAGACAA GCCCCATTTCCATATTAGTTTTATCATGAACGTATCTCCGGAATGCGATTGCTGGAATCATAACGATGCCGCCATCATCC CTGATTTGGGGATCGCCGCGTCTTTCGATCCGGTGGCCTTGGATAAGGCTTGCGCCGATATGGTTATCAACGCTCCTATC ATCGGAGGTAATAAATTAGCCGAGACTCATCCTCACGAACACCTTGAGGGAGAGGATAAATTCCATTTGATTCATCCGGA TACGAACTGGCAAGCCGGCCTACGTTATGCGGAAGAAATCGGACTGGGTTCTCAAGCGTATGAATTAATAACGGTTTAA
Upstream 100 bases:
>100_bases TGATTCCGCTGAAGCAAGTCCATATACAAATCTGTTTTACGCGAATATAAAAAATGTTCCGTGTTTTTCGTACCTTTGTC AACACTAAACCAATAAAAAG
Downstream 100 bases:
>100_bases TAGACGGAATGAGTACAATTTGCGCTATATCTACAGCTCCGGGAGTAGGAGGAATCGCAGTGATTCGTGTCTCCGGACCG GATACTTTCAAGATTTGTGA
Product: Fe-S center protein ferredoxin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MNTSKVYFTNLRTTPSSNLLDKMERLVKRAGIANIDFKNQFVAIKIHFGEPGNLAYIRPNYAARLVSLLRELGAKPFLTD CNTLYSGRRSNAVDHLQSAMENGFNPMSAGCNVIIADGVKGTDYREIEIDGQYCKAPKIGAAIADADIIISMNHFKGHEQ AGFGGALKNLGMGCASVGGKLELHCASQPRIDTEACKGCNICVKHCAHDAIHLNNNRKAEIDYERCVGCGQCVALCQYDG AVMGEGDTSERLNYKIDEYTKAVLADKPHFHISFIMNVSPECDCWNHNDAAIIPDLGIAASFDPVALDKACADMVINAPI IGGNKLAETHPHEHLEGEDKFHLIHPDTNWQAGLRYAEEIGLGSQAYELITV
Sequences:
>Translated_372_residues MNTSKVYFTNLRTTPSSNLLDKMERLVKRAGIANIDFKNQFVAIKIHFGEPGNLAYIRPNYAARLVSLLRELGAKPFLTD CNTLYSGRRSNAVDHLQSAMENGFNPMSAGCNVIIADGVKGTDYREIEIDGQYCKAPKIGAAIADADIIISMNHFKGHEQ AGFGGALKNLGMGCASVGGKLELHCASQPRIDTEACKGCNICVKHCAHDAIHLNNNRKAEIDYERCVGCGQCVALCQYDG AVMGEGDTSERLNYKIDEYTKAVLADKPHFHISFIMNVSPECDCWNHNDAAIIPDLGIAASFDPVALDKACADMVINAPI IGGNKLAETHPHEHLEGEDKFHLIHPDTNWQAGLRYAEEIGLGSQAYELITV >Mature_372_residues MNTSKVYFTNLRTTPSSNLLDKMERLVKRAGIANIDFKNQFVAIKIHFGEPGNLAYIRPNYAARLVSLLRELGAKPFLTD CNTLYSGRRSNAVDHLQSAMENGFNPMSAGCNVIIADGVKGTDYREIEIDGQYCKAPKIGAAIADADIIISMNHFKGHEQ AGFGGALKNLGMGCASVGGKLELHCASQPRIDTEACKGCNICVKHCAHDAIHLNNNRKAEIDYERCVGCGQCVALCQYDG AVMGEGDTSERLNYKIDEYTKAVLADKPHFHISFIMNVSPECDCWNHNDAAIIPDLGIAASFDPVALDKACADMVINAPI IGGNKLAETHPHEHLEGEDKFHLIHPDTNWQAGLRYAEEIGLGSQAYELITV
Specific function: Unknown
COG id: COG2768
COG function: function code R; Uncharacterized Fe-S center protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40612; Mature: 40612
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSKVYFTNLRTTPSSNLLDKMERLVKRAGIANIDFKNQFVAIKIHFGEPGNLAYIRPN CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEECCC YAARLVSLLRELGAKPFLTDCNTLYSGRRSNAVDHLQSAMENGFNPMSAGCNVIIADGVK HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCHHCCCCEEEECCCC GTDYREIEIDGQYCKAPKIGAAIADADIIISMNHFKGHEQAGFGGALKNLGMGCASVGGK CCCEEEEEECCCEECCCCCCCEEECCEEEEEECCCCCCCCCCCCHHHHHCCCCHHHCCCE LELHCASQPRIDTEACKGCNICVKHCAHDAIHLNNNRKAEIDYERCVGCGQCVALCQYDG EEEEECCCCCCCHHHHCCCHHHHHHCCCCEEEECCCCCEEECHHHHCCHHHHHHHHHCCC AVMGEGDTSERLNYKIDEYTKAVLADKPHFHISFIMNVSPECDCWNHNDAAIIPDLGIAA EEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCC SFDPVALDKACADMVINAPIIGGNKLAETHPHEHLEGEDKFHLIHPDTNWQAGLRYAEEI CCCCHHHHHHHHHHEECCCEECCCCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHHHHH GLGSQAYELITV CCCCCCEEEEEC >Mature Secondary Structure MNTSKVYFTNLRTTPSSNLLDKMERLVKRAGIANIDFKNQFVAIKIHFGEPGNLAYIRPN CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEEECCC YAARLVSLLRELGAKPFLTDCNTLYSGRRSNAVDHLQSAMENGFNPMSAGCNVIIADGVK HHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCHHCCCCEEEECCCC GTDYREIEIDGQYCKAPKIGAAIADADIIISMNHFKGHEQAGFGGALKNLGMGCASVGGK CCCEEEEEECCCEECCCCCCCEEECCEEEEEECCCCCCCCCCCCHHHHHCCCCHHHCCCE LELHCASQPRIDTEACKGCNICVKHCAHDAIHLNNNRKAEIDYERCVGCGQCVALCQYDG EEEEECCCCCCCHHHHCCCHHHHHHCCCCEEEECCCCCEEECHHHHCCHHHHHHHHHCCC AVMGEGDTSERLNYKIDEYTKAVLADKPHFHISFIMNVSPECDCWNHNDAAIIPDLGIAA EEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCCCCC SFDPVALDKACADMVINAPIIGGNKLAETHPHEHLEGEDKFHLIHPDTNWQAGLRYAEEI CCCCHHHHHHHHHHEECCCEECCCCCCCCCCHHHCCCCCCEEEECCCCCHHHHHHHHHHH GLGSQAYELITV CCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA