| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008063
Identifier: 150008063
GI number: 150008063
Start: 1657715
End: 1658959
Strand: Direct
Name: 150008063
Synonym: BDI_1426
Alternate gene names: NA
Gene position: 1657715-1658959 (Clockwise)
Preceding gene: 150008059
Following gene: 150008064
Centisome position: 34.45
GC content: 46.59
Gene sequence:
>1245_bases ATGAGCGATCAACCAATAGATTTTACGCAACGTAACATAGCCATCGACATCCTCCGGGCCGTCACGATGTGCGTGATGAT CTTCGAAAGCGTACATCAAATTAAAAATTTAAACATTAAAACATATCGCTATATGAAAAAGATTATCGGACTATTCTTGC TTATATGGGCTATAGGTTCAGCCCAAGTTTCCGCCCAATCAGAGACAAACCGTTTAGATAGTATCATGCCCGTACGAGGC TTGGCCATCGCCGCTCCATCCGCACAGAAGTTGGATCTATTCTTGAAGTTCGTCCAAGAGGAACTGGCTCCCAGTCATTT CAACTTGTTGATTCTACGGGTAGACTGGAATTATGCCTATGAGTCCCATCCAGAACTGAGGGATCCGACCCCACTCACAC GAGAGGATGTGAAAAAGATCGTAAAGGTTTGCCGGGATAACGGAATACGTATCGCTCCCCAGATCAATCTCTTGGGGCAT CAATCATGGGCTGAGACTACCTACGCTTTATTACGTGAGTATCCGGAGTTCGACGAGACGCCACATGTGGATACCAAGAA CTATACGGGTTGGCCCAACTCAGACGGACTTTATTGTAAAAGTTACTGCCCGCTTCATCCGGAAGTACATAAAATCGTAT TCGCTTTAGTAGACGAGTTGACGGATGTTTTCGAAACTCAATTATTCCATGCCGGAATGGACGAGGTCTTTTATATCGGA CATGATAGTTGCGTCCGTTGCGGCGGACATGACAAGGCTGAGTTATATGCCGGTGAGGTCACTAAAATACAAAACCACTT AGCCTCACAAGGCAAACGATTGATGATATGGGGAGACCGCCTGATCGATGGCAAAACTACCGGGATCGGCGCTTGGGAAG CCAGCATGAACAATACCTACCGTGCGATCGACTTGATCCCGAAAGATGTTTTTATCTGCGACTGGCATTATGAGCGTGCC GAGCAAACCGCTGTTTACTTTGCCATGAAAGGCTTCGACGTTGCTACATGCCCTTGGCGTAAACCTCAGATAGCGCTTCA ACAGGTAGATGATATGATCCATTTCCGCCAGCATTCAAATCCGGAAATGTCTCGCCATTTCCAAGGAATTATCGAGACAG TCTGGTCCGGTGCAGACAGTTTCCTCGAGGCCTATTATAACCCGACTACCTATAAGCAAGAGGTCTCAGACGCTGTCACG GTCAAGAAACTAATCGAGAAATATAAGGCTTTGGAGAATCAGTGA
Upstream 100 bases:
>100_bases TTTTAATTATTATTCATATTTATAAGGCACAAATGTAATGATATGTCTCTTATTGATTATATTTGTCTTGTATTAAATTC ACCTTTAGTCTAAATATATT
Downstream 100 bases:
>100_bases ATGTAATTTAGGTCATAATACCTGTAATCCATCTACAAAAGTTTCTCCGGATTTCATCGATCTTTGCCGTTGCAATCGAA AAGGGATAAACAAACCAAGA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Beta-Hexosaminidase; Family; Beta-N-Acetylhexosaminidase; Glycoside Hydrolase; N-Acetyl-Beta-Hexosaminidase
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSDQPIDFTQRNIAIDILRAVTMCVMIFESVHQIKNLNIKTYRYMKKIIGLFLLIWAIGSAQVSAQSETNRLDSIMPVRG LAIAAPSAQKLDLFLKFVQEELAPSHFNLLILRVDWNYAYESHPELRDPTPLTREDVKKIVKVCRDNGIRIAPQINLLGH QSWAETTYALLREYPEFDETPHVDTKNYTGWPNSDGLYCKSYCPLHPEVHKIVFALVDELTDVFETQLFHAGMDEVFYIG HDSCVRCGGHDKAELYAGEVTKIQNHLASQGKRLMIWGDRLIDGKTTGIGAWEASMNNTYRAIDLIPKDVFICDWHYERA EQTAVYFAMKGFDVATCPWRKPQIALQQVDDMIHFRQHSNPEMSRHFQGIIETVWSGADSFLEAYYNPTTYKQEVSDAVT VKKLIEKYKALENQ
Sequences:
>Translated_414_residues MSDQPIDFTQRNIAIDILRAVTMCVMIFESVHQIKNLNIKTYRYMKKIIGLFLLIWAIGSAQVSAQSETNRLDSIMPVRG LAIAAPSAQKLDLFLKFVQEELAPSHFNLLILRVDWNYAYESHPELRDPTPLTREDVKKIVKVCRDNGIRIAPQINLLGH QSWAETTYALLREYPEFDETPHVDTKNYTGWPNSDGLYCKSYCPLHPEVHKIVFALVDELTDVFETQLFHAGMDEVFYIG HDSCVRCGGHDKAELYAGEVTKIQNHLASQGKRLMIWGDRLIDGKTTGIGAWEASMNNTYRAIDLIPKDVFICDWHYERA EQTAVYFAMKGFDVATCPWRKPQIALQQVDDMIHFRQHSNPEMSRHFQGIIETVWSGADSFLEAYYNPTTYKQEVSDAVT VKKLIEKYKALENQ >Mature_413_residues SDQPIDFTQRNIAIDILRAVTMCVMIFESVHQIKNLNIKTYRYMKKIIGLFLLIWAIGSAQVSAQSETNRLDSIMPVRGL AIAAPSAQKLDLFLKFVQEELAPSHFNLLILRVDWNYAYESHPELRDPTPLTREDVKKIVKVCRDNGIRIAPQINLLGHQ SWAETTYALLREYPEFDETPHVDTKNYTGWPNSDGLYCKSYCPLHPEVHKIVFALVDELTDVFETQLFHAGMDEVFYIGH DSCVRCGGHDKAELYAGEVTKIQNHLASQGKRLMIWGDRLIDGKTTGIGAWEASMNNTYRAIDLIPKDVFICDWHYERAE QTAVYFAMKGFDVATCPWRKPQIALQQVDDMIHFRQHSNPEMSRHFQGIIETVWSGADSFLEAYYNPTTYKQEVSDAVTV KKLIEKYKALENQ
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47561; Mature: 47430
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQPIDFTQRNIAIDILRAVTMCVMIFESVHQIKNLNIKTYRYMKKIIGLFLLIWAIGS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC AQVSAQSETNRLDSIMPVRGLAIAAPSAQKLDLFLKFVQEELAPSHFNLLILRVDWNYAY CCEECCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCC ESHPELRDPTPLTREDVKKIVKVCRDNGIRIAPQINLLGHQSWAETTYALLREYPEFDET CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCC PHVDTKNYTGWPNSDGLYCKSYCPLHPEVHKIVFALVDELTDVFETQLFHAGMDEVFYIG CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC HDSCVRCGGHDKAELYAGEVTKIQNHLASQGKRLMIWGDRLIDGKTTGIGAWEASMNNTY CCHHEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCEEEECCCCCCE RAIDLIPKDVFICDWHYERAEQTAVYFAMKGFDVATCPWRKPQIALQQVDDMIHFRQHSN EEEEECCCCEEEEECCHHHHHHHEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCC PEMSRHFQGIIETVWSGADSFLEAYYNPTTYKQEVSDAVTVKKLIEKYKALENQ HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDQPIDFTQRNIAIDILRAVTMCVMIFESVHQIKNLNIKTYRYMKKIIGLFLLIWAIGS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC AQVSAQSETNRLDSIMPVRGLAIAAPSAQKLDLFLKFVQEELAPSHFNLLILRVDWNYAY CCEECCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCC ESHPELRDPTPLTREDVKKIVKVCRDNGIRIAPQINLLGHQSWAETTYALLREYPEFDET CCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCC PHVDTKNYTGWPNSDGLYCKSYCPLHPEVHKIVFALVDELTDVFETQLFHAGMDEVFYIG CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC HDSCVRCGGHDKAELYAGEVTKIQNHLASQGKRLMIWGDRLIDGKTTGIGAWEASMNNTY CCHHEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCEEEECCCCCCE RAIDLIPKDVFICDWHYERAEQTAVYFAMKGFDVATCPWRKPQIALQQVDDMIHFRQHSN EEEEECCCCEEEEECCHHHHHHHEEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCC PEMSRHFQGIIETVWSGADSFLEAYYNPTTYKQEVSDAVTVKKLIEKYKALENQ HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA