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The map label for this gene is rhaT [H]

Identifier: 150007960

GI number: 150007960

Start: 1537223

End: 1538251

Strand: Reverse

Name: rhaT [H]

Synonym: BDI_1321

Alternate gene names: 150007960

Gene position: 1538251-1537223 (Counterclockwise)

Preceding gene: 150007961

Following gene: 150007959

Centisome position: 31.97

GC content: 51.7

Gene sequence:

>1029_bases
ATGATAGAGATCGGGATCGGGTTGTTGATCATCGCGATCGGCAGTTTCGGGCAGAGTAGCTCGTACGTGCCGATCAATAA
GATCCGGGATTGGAGTTGGGAAAGCTTTTGGTTGGTGCAAGGTATCTTCGCTTGGTTGGTTTTCCCTTATCTCGGGGCGA
TGTTGGCGGTACCGGAAGGGAGTACCTTGCTGGAGCTATGGTGTTCGCCGGGTAGCTTGGGAGCGGTTATCTATGGCATG
CTCTGGGGTGTCGGCGGGTTGACTTTCGGGTTGAGTATGCGTTATCTGGGCGTAGCTTTGGGACAGAGCATCGCCTTGGG
TACATGCGCCGGTTTTGGTACGCTCTTCCCGGCTTTGTTCGGTGGAACGAATCTGTTTGAGGGAACCGGATTGATCCTGT
TGACCGGTGTTTGCATTACCTTGGCAGGTATCGCCGTGATCGGTTACGCCGGAAGCCTGCGGGCCCGGAATATGAGTGAG
GAGGAGAAGAAAGCGGCGGTGAAGGATTTTGCCTTGACCAAGGGCTTGGCGGTAGCCTTGCTTGCCGGCGTGATGAGCGC
CTGCTTCAATTTGGGTTTGGAATCGGGAAACGAGGTGCTGGCGAAAGCGAAAGAGGCGGGAGCTAGCGATCTGTTCGCCT
TGAACCCCGTGATACTGTTGGTTACTTTGGGCGGCTTTTGTACGAACGCTGTGTATTGTATTTTCCAGAACGTGAAAAAC
GGGACGGGCAAGGATTATTTCTCGGTATCGGGAGGTACATTGCTGAATAATGTCTTATTTTGCGCTTTGGCAGGCGTGCT
TTGGTACTCGCAGTTCTTCGGGCTGGGGATGGGAAAGAGCTATTTCTCGGATTCCCCGGTTATGCTGGCTTTCTCGTGGA
GTATCCTGATGTCGTTGAATGTTATTTTCAGTAATGTCTGGGGCATCTTATTAAAAGAATGGAAGGGCGTGGATCGCCGG
ACGATCGTGGTATTGATTACCGGCATGTGTATCTTGATCCTTTCCTTATTATATCCGAATATAGTTTAA

Upstream 100 bases:

>100_bases
CGGTTTGGGATATGTATTGTCTACAAAGTGGGGTCCCCGTAGGAGAGTCTTATATCGCTGAGATCGAGAAATATGAGTCC
GACGTTACCTCAAGACGGCA

Downstream 100 bases:

>100_bases
TTAAAATAGACATGATAATACTAAGAAACAATGAACGCCTGATGGCGGAAATAGATCGTATCGCCGAGGTCGCCGGCTAT
TTGTGGACCAAGGGTTGGGC

Product: rhamnose-proton symporter

Products: Proton [Cytoplasm]; L-rhamnose [Cytoplasm] [C]

Alternate protein names: L-rhamnose-H(+) transport protein [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MIEIGIGLLIIAIGSFGQSSSYVPINKIRDWSWESFWLVQGIFAWLVFPYLGAMLAVPEGSTLLELWCSPGSLGAVIYGM
LWGVGGLTFGLSMRYLGVALGQSIALGTCAGFGTLFPALFGGTNLFEGTGLILLTGVCITLAGIAVIGYAGSLRARNMSE
EEKKAAVKDFALTKGLAVALLAGVMSACFNLGLESGNEVLAKAKEAGASDLFALNPVILLVTLGGFCTNAVYCIFQNVKN
GTGKDYFSVSGGTLLNNVLFCALAGVLWYSQFFGLGMGKSYFSDSPVMLAFSWSILMSLNVIFSNVWGILLKEWKGVDRR
TIVVLITGMCILILSLLYPNIV

Sequences:

>Translated_342_residues
MIEIGIGLLIIAIGSFGQSSSYVPINKIRDWSWESFWLVQGIFAWLVFPYLGAMLAVPEGSTLLELWCSPGSLGAVIYGM
LWGVGGLTFGLSMRYLGVALGQSIALGTCAGFGTLFPALFGGTNLFEGTGLILLTGVCITLAGIAVIGYAGSLRARNMSE
EEKKAAVKDFALTKGLAVALLAGVMSACFNLGLESGNEVLAKAKEAGASDLFALNPVILLVTLGGFCTNAVYCIFQNVKN
GTGKDYFSVSGGTLLNNVLFCALAGVLWYSQFFGLGMGKSYFSDSPVMLAFSWSILMSLNVIFSNVWGILLKEWKGVDRR
TIVVLITGMCILILSLLYPNIV
>Mature_342_residues
MIEIGIGLLIIAIGSFGQSSSYVPINKIRDWSWESFWLVQGIFAWLVFPYLGAMLAVPEGSTLLELWCSPGSLGAVIYGM
LWGVGGLTFGLSMRYLGVALGQSIALGTCAGFGTLFPALFGGTNLFEGTGLILLTGVCITLAGIAVIGYAGSLRARNMSE
EEKKAAVKDFALTKGLAVALLAGVMSACFNLGLESGNEVLAKAKEAGASDLFALNPVILLVTLGGFCTNAVYCIFQNVKN
GTGKDYFSVSGGTLLNNVLFCALAGVLWYSQFFGLGMGKSYFSDSPVMLAFSWSILMSLNVIFSNVWGILLKEWKGVDRR
TIVVLITGMCILILSLLYPNIV

Specific function: Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-rhamnose transporter (TC 2.A.7.6) family [H]

Homologues:

Organism=Escherichia coli, GI1790341, Length=338, Percent_Identity=30.1775147928994, Blast_Score=159, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004673
- InterPro:   IPR010476 [H]

Pfam domain/function: PF06379 RhaT [H]

EC number: NA

Molecular weight: Translated: 36356; Mature: 36356

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIGIGLLIIAIGSFGQSSSYVPINKIRDWSWESFWLVQGIFAWLVFPYLGAMLAVPEG
CEEEHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCC
STLLELWCSPGSLGAVIYGMLWGVGGLTFGLSMRYLGVALGQSIALGTCAGFGTLFPALF
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GGTNLFEGTGLILLTGVCITLAGIAVIGYAGSLRARNMSEEEKKAAVKDFALTKGLAVAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAGVMSACFNLGLESGNEVLAKAKEAGASDLFALNPVILLVTLGGFCTNAVYCIFQNVKN
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTGKDYFSVSGGTLLNNVLFCALAGVLWYSQFFGLGMGKSYFSDSPVMLAFSWSILMSLN
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEHHHHHHHHH
VIFSNVWGILLKEWKGVDRRTIVVLITGMCILILSLLYPNIV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIEIGIGLLIIAIGSFGQSSSYVPINKIRDWSWESFWLVQGIFAWLVFPYLGAMLAVPEG
CEEEHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCC
STLLELWCSPGSLGAVIYGMLWGVGGLTFGLSMRYLGVALGQSIALGTCAGFGTLFPALF
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GGTNLFEGTGLILLTGVCITLAGIAVIGYAGSLRARNMSEEEKKAAVKDFALTKGLAVAL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LAGVMSACFNLGLESGNEVLAKAKEAGASDLFALNPVILLVTLGGFCTNAVYCIFQNVKN
HHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTGKDYFSVSGGTLLNNVLFCALAGVLWYSQFFGLGMGKSYFSDSPVMLAFSWSILMSLN
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEHHHHHHHHH
VIFSNVWGILLKEWKGVDRRTIVVLITGMCILILSLLYPNIV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-rhamnose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-rhamnose [Periplasm] = Proton [Cytoplasm] + L-rhamnose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA