| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006423
Identifier: 150006423
GI number: 150006423
Start: 4856236
End: 4857753
Strand: Direct
Name: 150006423
Synonym: BVU_3942
Alternate gene names: NA
Gene position: 4856236-4857753 (Clockwise)
Preceding gene: 150006422
Following gene: 150006424
Centisome position: 94.05
GC content: 46.11
Gene sequence:
>1518_bases ATGAACTACGACATGTCTTCTTACTTTGAAGACCCGGAATTTAAAGAAGCATTGGCAAAATACGAGGGTATGGTGGAGAA CCATACCCCCGCTTATTTTGAAGCTGATGAACTGATCGATATCGCCGAATACTACACTTTAAAAGGAAGACATAAAGATG CAGACAAGGCCATAGACCTCACTCTCCAATTACATCCCGAAAACACAGACGCCCTGGTTTTCCGGATACGCTCCCTGATG CTGCAAAACAAAAAGGAAGAAGCCAAAGTGGTAGCGCAACTCATCGCCAACAGCACCGACCGTGAATGCAGGTTCCTGCA AGCTGACATGCTGATGGAGGAGGACCGCATAGAAGAGGCCGAGGAGATATTCAAACAACTGGTCATGGACGAGGAGTACG AAGTGGATACGCTGCTGGATATCATCCAGGACTATACCAACGCCAATCAGGAAGAATATGCCGGACAATGGGTAGACTGC CTGTTTGCTCATTCCGACATGCAAACCCTGCCCAAAACCAACCAACGCCTCCGCGATGTGCTGTGCGATTATTACAGCAC GTTCAACAAGCCCGACTTGGCCATCCCCTACCTGAACATGACCCTGAACGAGTATCCCTATTCCATCGAGCATTGGAACG AACTGGGGAAATGCCATCTGCAACAATGCCAATACGAAGAGGCGAACGAAGCCTTGGATTTCGCATTAGCCATTGATGAT GAAAATACAGATTCATTGACTTTGAAAGCATTTGGTTACCACCAGGCAGGCAATTTAAAGGAATCCTGCGACTACTATCT CCGTCTGGCCAATGTGAGCAAGAACAAGACGAAAGCCTATCTGGCACTGGCACAAATCTATCTGGAGATGCGGGATCATG CTTCGGCCATCAGCTATATAGAAAAGCTGATAAACCGGAAATCGGGCCTGACCGACTACGAATTGGCCGAGTTATATTCT GACACGGCGCTCTGTCATGCCTATCTGGGGCATACCGAAAACGGATACAAATATATCAACCAAGCATTGGAGCTGAACGA ACATGATGCCGAAATACGTATCGCAGCCGGACGCTTCTTTACAATAGAAGCTCAAAAAAGCGATATCAGCGAAGAGGAAC AAGAAAACAACCTCCGCAATGCGGAACATCAATTCACACGTGCATTGGAGTTTACTCCGAAGGAGGAACGGTTTGATGTG CTGTTCAAAATCGGCTCTCTATATTTTGACGAACATAATTTTGAATATGCCAACCAGTACTTCGAACTAATAAACAAAGA ATTTCCGGAGGATGCCGATGCCACTTACTTTTTTCTGGCTTACGGTTATTACCACCAGCAGGAATCCGCTTCGTTCATGC ACTATCTGGCTAAAATCAGAAAAGAAATTCCGGATATGTACGCCACCATGGGAACCGGCGATACCATACTGATGACCGAC ACCTACTTCAATGAAGCGCTGCGTGCCATTAAAGAAGATGTCAGCACAGGCAAGATTAACTTAAACAAATATTTATAA
Upstream 100 bases:
>100_bases TTCAATGTAGACAAAGACTCTACACCGGAACATCTGGTGTTCAACCGCACCGTATCTTTAAAAGATACCTGGAGCAAAAT CAATAAATAAAAACAAGCTT
Downstream 100 bases:
>100_bases TAATTTTATGGAATCAGTTGCATTTATCCAGTGGTGTCTGGACCACTTGAATTATTGGACAATAACGTTATTAATGGCCA TCGAAAGCTCTTTTATCCCT
Product: putative N-acetylglucosamine transferase
Products: NA
Alternate protein names: N-Acetylglucosamine Transferase; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR-Domain-Containing Protein
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MNYDMSSYFEDPEFKEALAKYEGMVENHTPAYFEADELIDIAEYYTLKGRHKDADKAIDLTLQLHPENTDALVFRIRSLM LQNKKEEAKVVAQLIANSTDRECRFLQADMLMEEDRIEEAEEIFKQLVMDEEYEVDTLLDIIQDYTNANQEEYAGQWVDC LFAHSDMQTLPKTNQRLRDVLCDYYSTFNKPDLAIPYLNMTLNEYPYSIEHWNELGKCHLQQCQYEEANEALDFALAIDD ENTDSLTLKAFGYHQAGNLKESCDYYLRLANVSKNKTKAYLALAQIYLEMRDHASAISYIEKLINRKSGLTDYELAELYS DTALCHAYLGHTENGYKYINQALELNEHDAEIRIAAGRFFTIEAQKSDISEEEQENNLRNAEHQFTRALEFTPKEERFDV LFKIGSLYFDEHNFEYANQYFELINKEFPEDADATYFFLAYGYYHQQESASFMHYLAKIRKEIPDMYATMGTGDTILMTD TYFNEALRAIKEDVSTGKINLNKYL
Sequences:
>Translated_505_residues MNYDMSSYFEDPEFKEALAKYEGMVENHTPAYFEADELIDIAEYYTLKGRHKDADKAIDLTLQLHPENTDALVFRIRSLM LQNKKEEAKVVAQLIANSTDRECRFLQADMLMEEDRIEEAEEIFKQLVMDEEYEVDTLLDIIQDYTNANQEEYAGQWVDC LFAHSDMQTLPKTNQRLRDVLCDYYSTFNKPDLAIPYLNMTLNEYPYSIEHWNELGKCHLQQCQYEEANEALDFALAIDD ENTDSLTLKAFGYHQAGNLKESCDYYLRLANVSKNKTKAYLALAQIYLEMRDHASAISYIEKLINRKSGLTDYELAELYS DTALCHAYLGHTENGYKYINQALELNEHDAEIRIAAGRFFTIEAQKSDISEEEQENNLRNAEHQFTRALEFTPKEERFDV LFKIGSLYFDEHNFEYANQYFELINKEFPEDADATYFFLAYGYYHQQESASFMHYLAKIRKEIPDMYATMGTGDTILMTD TYFNEALRAIKEDVSTGKINLNKYL >Mature_505_residues MNYDMSSYFEDPEFKEALAKYEGMVENHTPAYFEADELIDIAEYYTLKGRHKDADKAIDLTLQLHPENTDALVFRIRSLM LQNKKEEAKVVAQLIANSTDRECRFLQADMLMEEDRIEEAEEIFKQLVMDEEYEVDTLLDIIQDYTNANQEEYAGQWVDC LFAHSDMQTLPKTNQRLRDVLCDYYSTFNKPDLAIPYLNMTLNEYPYSIEHWNELGKCHLQQCQYEEANEALDFALAIDD ENTDSLTLKAFGYHQAGNLKESCDYYLRLANVSKNKTKAYLALAQIYLEMRDHASAISYIEKLINRKSGLTDYELAELYS DTALCHAYLGHTENGYKYINQALELNEHDAEIRIAAGRFFTIEAQKSDISEEEQENNLRNAEHQFTRALEFTPKEERFDV LFKIGSLYFDEHNFEYANQYFELINKEFPEDADATYFFLAYGYYHQQESASFMHYLAKIRKEIPDMYATMGTGDTILMTD TYFNEALRAIKEDVSTGKINLNKYL
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59046; Mature: 59046
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYDMSSYFEDPEFKEALAKYEGMVENHTPAYFEADELIDIAEYYTLKGRHKDADKAIDL CCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCEEEE TLQLHPENTDALVFRIRSLMLQNKKEEAKVVAQLIANSTDRECRFLQADMLMEEDRIEEA EEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EEIFKQLVMDEEYEVDTLLDIIQDYTNANQEEYAGQWVDCLFAHSDMQTLPKTNQRLRDV HHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHH LCDYYSTFNKPDLAIPYLNMTLNEYPYSIEHWNELGKCHLQQCQYEEANEALDFALAIDD HHHHHHHCCCCCCEECEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHEEEEEEECC ENTDSLTLKAFGYHQAGNLKESCDYYLRLANVSKNKTKAYLALAQIYLEMRDHASAISYI CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKLINRKSGLTDYELAELYSDTALCHAYLGHTENGYKYINQALELNEHDAEIRIAAGRFF HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECEEE TIEAQKSDISEEEQENNLRNAEHQFTRALEFTPKEERFDVLFKIGSLYFDEHNFEYANQY EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH FELINKEFPEDADATYFFLAYGYYHQQESASFMHYLAKIRKEIPDMYATMGTGDTILMTD HHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH TYFNEALRAIKEDVSTGKINLNKYL HHHHHHHHHHHHHHCCCEEEECCCC >Mature Secondary Structure MNYDMSSYFEDPEFKEALAKYEGMVENHTPAYFEADELIDIAEYYTLKGRHKDADKAIDL CCCCCHHHCCCHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCEEEE TLQLHPENTDALVFRIRSLMLQNKKEEAKVVAQLIANSTDRECRFLQADMLMEEDRIEEA EEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EEIFKQLVMDEEYEVDTLLDIIQDYTNANQEEYAGQWVDCLFAHSDMQTLPKTNQRLRDV HHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHH LCDYYSTFNKPDLAIPYLNMTLNEYPYSIEHWNELGKCHLQQCQYEEANEALDFALAIDD HHHHHHHCCCCCCEECEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHEEEEEEECC ENTDSLTLKAFGYHQAGNLKESCDYYLRLANVSKNKTKAYLALAQIYLEMRDHASAISYI CCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EKLINRKSGLTDYELAELYSDTALCHAYLGHTENGYKYINQALELNEHDAEIRIAAGRFF HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECEEE TIEAQKSDISEEEQENNLRNAEHQFTRALEFTPKEERFDVLFKIGSLYFDEHNFEYANQY EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH FELINKEFPEDADATYFFLAYGYYHQQESASFMHYLAKIRKEIPDMYATMGTGDTILMTD HHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH TYFNEALRAIKEDVSTGKINLNKYL HHHHHHHHHHHHHHCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA