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The map label for this gene is apl [H]

Identifier: 150006424

GI number: 150006424

Start: 4857761

End: 4858387

Strand: Direct

Name: apl [H]

Synonym: BVU_3943

Alternate gene names: 150006424

Gene position: 4857761-4858387 (Clockwise)

Preceding gene: 150006423

Following gene: 150006425

Centisome position: 94.08

GC content: 46.41

Gene sequence:

>627_bases
ATGGAATCAGTTGCATTTATCCAGTGGTGTCTGGACCACTTGAATTATTGGACAATAACGTTATTAATGGCCATCGAAAG
CTCTTTTATCCCTTTCCCCTCGGAAGTGGTAGTGCCGCCCGCCGCCTATAAGGCTGCCGGAGGAAACAGTGACCTGAATG
TATTTCTGGTAGTTATATTTGCGACCATCGGAGCCAATATAGGAGCCATCATCAATTATTATATAGCCTATTTCGTAGGC
CGTCCGCTGGTTTATAAATTTGCGAACAGCCGCTTCGGACACATGTGCCTGATTGATGAAGCCAAGGTTCAGAACGCGGA
ACACTACTTTGACAAGCATGGGGCACTCTCCACCTTTATCGGACGTCTTATTCCTGCCGTCCGCCAGCTTATCTCCATTC
CTGCCGGTCTGGCCAAGATGAAATTATCCACTTTCCTGCTGTACACAACGCTGGGAGCAGGTATCTGGAATGCCATCCTG
GCAGCCATCGGTTACTATCTGCAATCAGTGGTTCCCGAAGAGCAGTTATTGAGTACCGTCACCGAATACAGCCACGAGTT
AGGATATTGCTTTATAGCTATCGGCGTTTTAATAGTAGGTTTCCTGATTTATAAAGGAAGAAAATAA

Upstream 100 bases:

>100_bases
ATACTGATGACCGACACCTACTTCAATGAAGCGCTGCGTGCCATTAAAGAAGATGTCAGCACAGGCAAGATTAACTTAAA
CAAATATTTATAATAATTTT

Downstream 100 bases:

>100_bases
AAAAGAATGAACTTTTTTCCATTTAAATTTGTTATCATTACAGTATCGAACTAAAATATAATAAAATTATGGCAAAAACA
GCATTTAAAGGCACACCGGT

Product: putative alkaline phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MESVAFIQWCLDHLNYWTITLLMAIESSFIPFPSEVVVPPAAYKAAGGNSDLNVFLVVIFATIGANIGAIINYYIAYFVG
RPLVYKFANSRFGHMCLIDEAKVQNAEHYFDKHGALSTFIGRLIPAVRQLISIPAGLAKMKLSTFLLYTTLGAGIWNAIL
AAIGYYLQSVVPEEQLLSTVTEYSHELGYCFIAIGVLIVGFLIYKGRK

Sequences:

>Translated_208_residues
MESVAFIQWCLDHLNYWTITLLMAIESSFIPFPSEVVVPPAAYKAAGGNSDLNVFLVVIFATIGANIGAIINYYIAYFVG
RPLVYKFANSRFGHMCLIDEAKVQNAEHYFDKHGALSTFIGRLIPAVRQLISIPAGLAKMKLSTFLLYTTLGAGIWNAIL
AAIGYYLQSVVPEEQLLSTVTEYSHELGYCFIAIGVLIVGFLIYKGRK
>Mature_208_residues
MESVAFIQWCLDHLNYWTITLLMAIESSFIPFPSEVVVPPAAYKAAGGNSDLNVFLVVIFATIGANIGAIINYYIAYFVG
RPLVYKFANSRFGHMCLIDEAKVQNAEHYFDKHGALSTFIGRLIPAVRQLISIPAGLAKMKLSTFLLYTTLGAGIWNAIL
AAIGYYLQSVVPEEQLLSTVTEYSHELGYCFIAIGVLIVGFLIYKGRK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=158, Percent_Identity=25.9493670886076, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23000; Mature: 23000

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESVAFIQWCLDHLNYWTITLLMAIESSFIPFPSEVVVPPAAYKAAGGNSDLNVFLVVIF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHCCCCCCCHHHHHHHHH
ATIGANIGAIINYYIAYFVGRPLVYKFANSRFGHMCLIDEAKVQNAEHYFDKHGALSTFI
HHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHCCHHHHHH
GRLIPAVRQLISIPAGLAKMKLSTFLLYTTLGAGIWNAILAAIGYYLQSVVPEEQLLSTV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TEYSHELGYCFIAIGVLIVGFLIYKGRK
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MESVAFIQWCLDHLNYWTITLLMAIESSFIPFPSEVVVPPAAYKAAGGNSDLNVFLVVIF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHCCCCCCCHHHHHHHHH
ATIGANIGAIINYYIAYFVGRPLVYKFANSRFGHMCLIDEAKVQNAEHYFDKHGALSTFI
HHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHCCHHHHHH
GRLIPAVRQLISIPAGLAKMKLSTFLLYTTLGAGIWNAILAAIGYYLQSVVPEEQLLSTV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TEYSHELGYCFIAIGVLIVGFLIYKGRK
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]