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The map label for this gene is potC [H]

Identifier: 150006050

GI number: 150006050

Start: 4407988

End: 4408779

Strand: Reverse

Name: potC [H]

Synonym: BVU_3554

Alternate gene names: 150006050

Gene position: 4408779-4407988 (Counterclockwise)

Preceding gene: 150006051

Following gene: 150006049

Centisome position: 85.39

GC content: 42.93

Gene sequence:

>792_bases
ATGGTAAAGAAAATTTTGTGTCAGGGGTATTTGTGGCTGCTTCTGCTATTGCTTTATGCGCCTATTTTTATCATTATGAT
CTATTCGTTTACCGAAGCAAAGGTGCTGGGCAACTGGACCGGGTTTTCCACCAAACTCTATTCATCCCTATTTGTTGCGG
GTACACATCATTCATTGACAAATGCCTTGGTCAATACCTTGAGCATTGCCTTTATTGCAGCTACCGTATCCACCTTGCTG
GGCAGTATTACGGCAATCGGCATATTCAATCTTCGTCCCCGTGCCCGTAAAGCAATCAGTTTTGTCAATAACATTCCTAT
TTTGAATGGAGATATTATTATTGGTATATCTCTATTCTTGCTGTTCGTATCTTTGGGTATTCCACAAGGATATACCACTG
TAGTGCTTGCACATATCACATTCTGTACTCCATATGTGGTGTTAAGTGTGTTGCCGCGTTTGAAACAGATGAATCCGAAT
ATTTATGAGGCGGCGCTTGACTTGGGGGCTACTCCTATGCAGGCACTCCGCAAGGTGATTGTTCCTGAGATTCTTCCGGG
AATGATTTCAGGTTTTATGTTGGCGGTGACTTTGTCCATTGACGATTTTGCCGTGACTGTATTTACTATTGGTAATGAAG
GGCTTGAAACTCTTTCCACCTATATTTATGCGGATGCACGGAAAGGAGGGTTGACCCCTGAACTTCGTCCGCTTTCTACC
ATTATATTCGTATTGGTGCTGGTATTGCTGGTTATCATCAATCGCCGTGCAGGCAAGAAAAAGGAGGTATAA

Upstream 100 bases:

>100_bases
GGAATTATGGGGCGGCCTTGTCGTTGATCATGTTGTTCCTTATTGGTGCGACAACCTTGCTCGCTTCAGATGATAAGGAT
CATAACGAAGGAGGTGGACT

Downstream 100 bases:

>100_bases
AAAATGAGGAAAATAAATAGATGGCTGATGGTGTGTGTGTGCGCGTTATTCTCTTTAACCGGATGCTATAACACAGAGCC
TCGTGAGAGTGTGCTGAAAA

Product: putrescine transport system permease protein PotI

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MVKKILCQGYLWLLLLLLYAPIFIIMIYSFTEAKVLGNWTGFSTKLYSSLFVAGTHHSLTNALVNTLSIAFIAATVSTLL
GSITAIGIFNLRPRARKAISFVNNIPILNGDIIIGISLFLLFVSLGIPQGYTTVVLAHITFCTPYVVLSVLPRLKQMNPN
IYEAALDLGATPMQALRKVIVPEILPGMISGFMLAVTLSIDDFAVTVFTIGNEGLETLSTYIYADARKGGLTPELRPLST
IIFVLVLVLLVIINRRAGKKKEV

Sequences:

>Translated_263_residues
MVKKILCQGYLWLLLLLLYAPIFIIMIYSFTEAKVLGNWTGFSTKLYSSLFVAGTHHSLTNALVNTLSIAFIAATVSTLL
GSITAIGIFNLRPRARKAISFVNNIPILNGDIIIGISLFLLFVSLGIPQGYTTVVLAHITFCTPYVVLSVLPRLKQMNPN
IYEAALDLGATPMQALRKVIVPEILPGMISGFMLAVTLSIDDFAVTVFTIGNEGLETLSTYIYADARKGGLTPELRPLST
IIFVLVLVLLVIINRRAGKKKEV
>Mature_263_residues
MVKKILCQGYLWLLLLLLYAPIFIIMIYSFTEAKVLGNWTGFSTKLYSSLFVAGTHHSLTNALVNTLSIAFIAATVSTLL
GSITAIGIFNLRPRARKAISFVNNIPILNGDIIIGISLFLLFVSLGIPQGYTTVVLAHITFCTPYVVLSVLPRLKQMNPN
IYEAALDLGATPMQALRKVIVPEILPGMISGFMLAVTLSIDDFAVTVFTIGNEGLETLSTYIYADARKGGLTPELRPLST
IIFVLVLVLLVIINRRAGKKKEV

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=251, Percent_Identity=38.2470119521912, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1787081, Length=232, Percent_Identity=38.3620689655172, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787714, Length=240, Percent_Identity=27.9166666666667, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788764, Length=175, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28733; Mature: 28733

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKILCQGYLWLLLLLLYAPIFIIMIYSFTEAKVLGNWTGFSTKLYSSLFVAGTHHSLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
NALVNTLSIAFIAATVSTLLGSITAIGIFNLRPRARKAISFVNNIPILNGDIIIGISLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LFVSLGIPQGYTTVVLAHITFCTPYVVLSVLPRLKQMNPNIYEAALDLGATPMQALRKVI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
VPEILPGMISGFMLAVTLSIDDFAVTVFTIGNEGLETLSTYIYADARKGGLTPELRPLST
HHHHHHHHHHHHHHHHEEEECCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
IIFVLVLVLLVIINRRAGKKKEV
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVKKILCQGYLWLLLLLLYAPIFIIMIYSFTEAKVLGNWTGFSTKLYSSLFVAGTHHSLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
NALVNTLSIAFIAATVSTLLGSITAIGIFNLRPRARKAISFVNNIPILNGDIIIGISLFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LFVSLGIPQGYTTVVLAHITFCTPYVVLSVLPRLKQMNPNIYEAALDLGATPMQALRKVI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
VPEILPGMISGFMLAVTLSIDDFAVTVFTIGNEGLETLSTYIYADARKGGLTPELRPLST
HHHHHHHHHHHHHHHHEEEECCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
IIFVLVLVLLVIINRRAGKKKEV
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]