| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is pchA [H]
Identifier: 150004956
GI number: 150004956
Start: 3105224
End: 3106366
Strand: Reverse
Name: pchA [H]
Synonym: BVU_2419
Alternate gene names: 150004956
Gene position: 3106366-3105224 (Counterclockwise)
Preceding gene: 150004957
Following gene: 150004955
Centisome position: 60.16
GC content: 50.83
Gene sequence:
>1143_bases ATGAATCTACCAGATATACATACGCAAAAATTATTGGATTGCCTGACACACAGCCGCCTCGGTTTCGCCCTCTACCGGTT ACCTTGGACAGACGAATGCTACCTGGTATTGCAAACCTCGGGCGATGTGGAACAATTAGCGGACATTCAGGAACTGAATG GAAAGAAAGGATTTGTCATGGCTCCTTTCCGGATATCGGAGGAACATCCCTTGGTACTTATCCGTCCGGATGTCACCGCA TACGACTGGAGCGAAATCAGCGAAGCACTGTCTTCACTGGAATGTGCGGATGCCCTGCTCACCTGCAAAAGCCGGCAGAG TGAACTCTCCCCTTTTGTTTCCGAAGAAACGGATAAAGAACAATATACCCGCGCATTCGGGCGTTTCATCACTCCCTTAC AAGAGAAGCGGTTCCAGAAACTGGTTCTGTCACGTTCTTCCGCCAGACATATCGGAGATGATTTTTCACCACTCGGCGCT TTTGTCCGGGCCTGCAACAACTATCCGCGCATGATGATTTACCTATGCCACACCCCTGCTTCCGGAACCTGGCTGGGCAG CACACCGGAAATCTTATTAAGCGGACACGGCAAAGAATGGCACACCGTGGCCCTGGCCGGTACCATGCCGATGCAGAATG AAGTGATGCCGACAGACTGGGACAGGAAGAACCGGGAAGAGCAGGGCTATGTGGCTGATTACATCCGCCGGATCGCCAAA AGATTCGGCAACAAGATGACGGAGAAAGGTCCTTATACCGCCCGTGCCGGACAATTGGTACACCTCAAGACCGATTTTTA TTTCTTGTTGAAAAATACAGACCATATAGGCGATTTATTGCAAGAACTCCATCCCACTCCCGCCGTCTGCGGCCTGCCCA AAGAGGAGGCTTTCCGGTTTATTCCGGACAATGAAGGGTACGACCGCAGTTATTATTCCGGGTTCACCGGCTGGCTGGAC ACAGAGGGGCATACCGATATCTACGTCAATCTGCGCTGCATGGAAATAAAGCCGGGTGAAGCCATCCTGTATGCAGGAGG AGGAATACTGGCTTCCTCGGAAGTAGAATCGGAATGGATGGAAACGGGAGACAAGATGAATACGATGCGGAGCATCCTTC ATCCTGACTTTATAAGTAAATAA
Upstream 100 bases:
>100_bases ACCGCGGCAGATCCTCGCATATATGGAATATAGATATCACCACTCCACAAGGACAACTGGTTTCTACTGTTCGTGTCGTT AATTTCATACTGAAAAAGAA
Downstream 100 bases:
>100_bases ATGGAAACAATTAAAGTAGAAGAATAATGTATTCAGACAAAAAGAACATACTTCAGTTGGTGGCACTTCTCAAAGCGCAC GGTGTGCGGAAAATAGTGCT
Product: isochorismate synthase EntC
Products: NA
Alternate protein names: Isochorismate mutase [H]
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNLPDIHTQKLLDCLTHSRLGFALYRLPWTDECYLVLQTSGDVEQLADIQELNGKKGFVMAPFRISEEHPLVLIRPDVTA YDWSEISEALSSLECADALLTCKSRQSELSPFVSEETDKEQYTRAFGRFITPLQEKRFQKLVLSRSSARHIGDDFSPLGA FVRACNNYPRMMIYLCHTPASGTWLGSTPEILLSGHGKEWHTVALAGTMPMQNEVMPTDWDRKNREEQGYVADYIRRIAK RFGNKMTEKGPYTARAGQLVHLKTDFYFLLKNTDHIGDLLQELHPTPAVCGLPKEEAFRFIPDNEGYDRSYYSGFTGWLD TEGHTDIYVNLRCMEIKPGEAILYAGGGILASSEVESEWMETGDKMNTMRSILHPDFISK
Sequences:
>Translated_380_residues MNLPDIHTQKLLDCLTHSRLGFALYRLPWTDECYLVLQTSGDVEQLADIQELNGKKGFVMAPFRISEEHPLVLIRPDVTA YDWSEISEALSSLECADALLTCKSRQSELSPFVSEETDKEQYTRAFGRFITPLQEKRFQKLVLSRSSARHIGDDFSPLGA FVRACNNYPRMMIYLCHTPASGTWLGSTPEILLSGHGKEWHTVALAGTMPMQNEVMPTDWDRKNREEQGYVADYIRRIAK RFGNKMTEKGPYTARAGQLVHLKTDFYFLLKNTDHIGDLLQELHPTPAVCGLPKEEAFRFIPDNEGYDRSYYSGFTGWLD TEGHTDIYVNLRCMEIKPGEAILYAGGGILASSEVESEWMETGDKMNTMRSILHPDFISK >Mature_380_residues MNLPDIHTQKLLDCLTHSRLGFALYRLPWTDECYLVLQTSGDVEQLADIQELNGKKGFVMAPFRISEEHPLVLIRPDVTA YDWSEISEALSSLECADALLTCKSRQSELSPFVSEETDKEQYTRAFGRFITPLQEKRFQKLVLSRSSARHIGDDFSPLGA FVRACNNYPRMMIYLCHTPASGTWLGSTPEILLSGHGKEWHTVALAGTMPMQNEVMPTDWDRKNREEQGYVADYIRRIAK RFGNKMTEKGPYTARAGQLVHLKTDFYFLLKNTDHIGDLLQELHPTPAVCGLPKEEAFRFIPDNEGYDRSYYSGFTGWLD TEGHTDIYVNLRCMEIKPGEAILYAGGGILASSEVESEWMETGDKMNTMRSILHPDFISK
Specific function: Involved in the conversion of chorismate to salicylate (Probable) [H]
COG id: COG1169
COG function: function code HQ; Isochorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786809, Length=210, Percent_Identity=30.4761904761905, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI87082077, Length=268, Percent_Identity=27.9850746268657, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788114, Length=262, Percent_Identity=25.9541984732824, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR015890 - InterPro: IPR004561 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =5.4.4.2 [H]
Molecular weight: Translated: 43212; Mature: 43212
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPDIHTQKLLDCLTHSRLGFALYRLPWTDECYLVLQTSGDVEQLADIQELNGKKGFVM CCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEE APFRISEEHPLVLIRPDVTAYDWSEISEALSSLECADALLTCKSRQSELSPFVSEETDKE CCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHH QYTRAFGRFITPLQEKRFQKLVLSRSSARHIGDDFSPLGAFVRACNNYPRMMIYLCHTPA HHHHHHHHHHCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCC SGTWLGSTPEILLSGHGKEWHTVALAGTMPMQNEVMPTDWDRKNREEQGYVADYIRRIAK CCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RFGNKMTEKGPYTARAGQLVHLKTDFYFLLKNTDHIGDLLQELHPTPAVCGLPKEEAFRF HHCCCCCCCCCCCCCCCCEEEEECCEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHEEE IPDNEGYDRSYYSGFTGWLDTEGHTDIYVNLRCMEIKPGEAILYAGGGILASSEVESEWM CCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECCCEEECCHHHHHHH ETGDKMNTMRSILHPDFISK HCCHHHHHHHHHHCCHHCCC >Mature Secondary Structure MNLPDIHTQKLLDCLTHSRLGFALYRLPWTDECYLVLQTSGDVEQLADIQELNGKKGFVM CCCCCHHHHHHHHHHHHHHHCEEEEECCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEE APFRISEEHPLVLIRPDVTAYDWSEISEALSSLECADALLTCKSRQSELSPFVSEETDKE CCEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHH QYTRAFGRFITPLQEKRFQKLVLSRSSARHIGDDFSPLGAFVRACNNYPRMMIYLCHTPA HHHHHHHHHHCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCC SGTWLGSTPEILLSGHGKEWHTVALAGTMPMQNEVMPTDWDRKNREEQGYVADYIRRIAK CCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RFGNKMTEKGPYTARAGQLVHLKTDFYFLLKNTDHIGDLLQELHPTPAVCGLPKEEAFRF HHCCCCCCCCCCCCCCCCEEEEECCEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHEEE IPDNEGYDRSYYSGFTGWLDTEGHTDIYVNLRCMEIKPGEAILYAGGGILASSEVESEWM CCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEECCCEEECCHHHHHHH ETGDKMNTMRSILHPDFISK HCCHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7500944; 10984043 [H]