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The map label for this gene is gcdC [H]

Identifier: 150004029

GI number: 150004029

Start: 1942847

End: 1943362

Strand: Direct

Name: gcdC [H]

Synonym: BVU_1464

Alternate gene names: 150004029

Gene position: 1942847-1943362 (Clockwise)

Preceding gene: 150004028

Following gene: 150004030

Centisome position: 37.63

GC content: 47.48

Gene sequence:

>516_bases
ATGGAAATACATATTGGAGACCGCGTAGCCGATGTGACGTTGGTGAGCAAGGAAGGAAACAAGGTACAGTTTATGATTGA
CGGAAAACCGTATGATGTGGATATCGTTATGGCCGAGAACGGAAGCTGTTCCATCCTGCACGATGGCAATTCCTTCAATG
CCGAACTGAGCCGTGGGGAGGGTGGAAAGAGTTATGATGTGAATATGTTCTACCGTTCCTATCATGTGGACATAGTGGAC
ACCCAGACCAAGTATCTGCGTATGAAAAAGGGCGGCGAGGAGAGACAGGATGACAAGATTGTGGCTCCTATGCCCGGAAA
GGTTGTGAAAATTCCCGTCCGGAAAGGTGACCGTCTGTCATCCGGGGATATTGTGGTAGTGCTGGAGGCCATGAAGATGC
AGAGCAACTACAAAGTGACCTCGGACTGTACGGTAAGGGATATCCTGGTCAATGAGGGGGATTCCGTCAATGCTAACCAG
GTATTAATAGTATTGGATATAATAAAAGAAGATTGA

Upstream 100 bases:

>100_bases
TCCCCAGCTGTCTGATGCCCGTCCCATCAGCCGTTGGCGTGAGTTCGGCTTGCAGAAAGGAGTGTTGAGAATCTGATTCT
TCATTTAATTAAGCAAAAGT

Downstream 100 bases:

>100_bases
TCATGACAAGAGAAGAAATATACAGCCGGTTTGAAGAGCTGGACAAACGCGCGTCGCTGGGCGGCGGTGTGGACAAGATC
GAGAAACAACACGCCCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Biotin carrier [H]

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MEIHIGDRVADVTLVSKEGNKVQFMIDGKPYDVDIVMAENGSCSILHDGNSFNAELSRGEGGKSYDVNMFYRSYHVDIVD
TQTKYLRMKKGGEERQDDKIVAPMPGKVVKIPVRKGDRLSSGDIVVVLEAMKMQSNYKVTSDCTVRDILVNEGDSVNANQ
VLIVLDIIKED

Sequences:

>Translated_171_residues
MEIHIGDRVADVTLVSKEGNKVQFMIDGKPYDVDIVMAENGSCSILHDGNSFNAELSRGEGGKSYDVNMFYRSYHVDIVD
TQTKYLRMKKGGEERQDDKIVAPMPGKVVKIPVRKGDRLSSGDIVVVLEAMKMQSNYKVTSDCTVRDILVNEGDSVNANQ
VLIVLDIIKED
>Mature_171_residues
MEIHIGDRVADVTLVSKEGNKVQFMIDGKPYDVDIVMAENGSCSILHDGNSFNAELSRGEGGKSYDVNMFYRSYHVDIVD
TQTKYLRMKKGGEERQDDKIVAPMPGKVVKIPVRKGDRLSSGDIVVVLEAMKMQSNYKVTSDCTVRDILVNEGDSVNANQ
VLIVLDIIKED

Specific function: Biotin carrier subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD) [H]

COG id: COG1038

COG function: function code C; Pyruvate carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 biotinyl-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001882
- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00364 Biotin_lipoyl [H]

EC number: =4.1.1.70 [H]

Molecular weight: Translated: 19015; Mature: 19015

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50968 BIOTINYL_LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIHIGDRVADVTLVSKEGNKVQFMIDGKPYDVDIVMAENGSCSILHDGNSFNAELSRGE
CEEECCCCEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCEEEECCC
GGKSYDVNMFYRSYHVDIVDTQTKYLRMKKGGEERQDDKIVAPMPGKVVKIPVRKGDRLS
CCCEEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCC
SGDIVVVLEAMKMQSNYKVTSDCTVRDILVNEGDSVNANQVLIVLDIIKED
CCCEEEEEEEEECCCCCEECCCCEEEEEEECCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MEIHIGDRVADVTLVSKEGNKVQFMIDGKPYDVDIVMAENGSCSILHDGNSFNAELSRGE
CEEECCCCEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCEEEECCC
GGKSYDVNMFYRSYHVDIVDTQTKYLRMKKGGEERQDDKIVAPMPGKVVKIPVRKGDRLS
CCCEEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCCC
SGDIVVVLEAMKMQSNYKVTSDCTVRDILVNEGDSVNANQVLIVLDIIKED
CCCEEEEEEEEECCCCCEECCCCEEEEEEECCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10027965 [H]