| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824162
Identifier: 148824162
GI number: 148824162
Start: 3338496
End: 3339209
Strand: Reverse
Name: 148824162
Synonym: TBFG_12987
Alternate gene names: NA
Gene position: 3339209-3338496 (Counterclockwise)
Preceding gene: 148824163
Following gene: 148824160
Centisome position: 75.47
GC content: 65.41
Gene sequence:
>714_bases ATGAACCGCAGAACGCTACTGTGGCTGTCGGCGATCGCGGCGCTGGCGCTGGTGGTCGCGTATCAGACGCTGGGATCATC GGCGGGCAGGCACGCTGACGAGTTCGCCGCCCGCGCTGGCGTGCCAACCGTGCAACCCGGTGCCGACGTGCTCGCCGGCA TCGCCGTGCTACCCAAACGGATCCACCGCTACGACTACCGCAGGTCCGCATTCGGTCACCCCTGGGACGATCGCAATGAC GCGCCGGGAGGGCACAACGGGTGCGACACCCGCGACGACATCCTCGACCGGGATCTGGTCGACAAGACATATGTGTCGAT CAAGCGGTGTCCGAATGCGGTGGCCACCGGCACCCTGCGCGATCCGTACACCAACACCACCGTTGCCTTCCAACGCGGCG CCAGTGTTGGCCAATCGGTCCAGATCGACCACATCGTTCCGCTCTCGTATGCCTGGGACATGGGCGCCTATCGGTGGCCG AACTCCGAGCGAATGCGCTTCGCCAACGATCCGGCCAACCTGCTGGCCGTGCAGGGGCAGGCAAATCAGGACAAGGGCGA TTCGCCACCGGCCCAATGGATGCCACCCAACAAGGCCTTCGCCTGTCAGTACGCGATGCAATTCATCGCCGTGCTGCGCG GCTATTCACTGCCAGTGGATCAGCCATCGTCCGACGTACTGCGTCAGGCCGCGGCCACCTGCCCGACGGGCTAG
Upstream 100 bases:
>100_bases ACTTCTGCATCGAGGCTTACAAGAACCCCACAGACCCCGCATTGGCGCTGATGGCCGCGCGATTCACCAGCACCGACCGC ATCGAATACTTAGATAAGTC
Downstream 100 bases:
>100_bases TCCACGCGCCGACGGTGAATCTCACGACGTGACACGCCGAGGAGACGTCGCGCGGTTCACAGTCGGCGGCGTATCAGGTG CCGGCGTAGGTCAGTGGATC
Product: membrane or exported protein
Products: NA
Alternate protein names: Lipoprotein; Extracellular Deoxyribonuclease; S-Layer Domain-Containing Protein; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III; Excalibur Domain-Containing Protein; Excalibur Domain Protein; Conserved Membrane Protein; S-Layer Domain Protein; Cation Transport ATPase
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MNRRTLLWLSAIAALALVVAYQTLGSSAGRHADEFAARAGVPTVQPGADVLAGIAVLPKRIHRYDYRRSAFGHPWDDRND APGGHNGCDTRDDILDRDLVDKTYVSIKRCPNAVATGTLRDPYTNTTVAFQRGASVGQSVQIDHIVPLSYAWDMGAYRWP NSERMRFANDPANLLAVQGQANQDKGDSPPAQWMPPNKAFACQYAMQFIAVLRGYSLPVDQPSSDVLRQAAATCPTG
Sequences:
>Translated_237_residues MNRRTLLWLSAIAALALVVAYQTLGSSAGRHADEFAARAGVPTVQPGADVLAGIAVLPKRIHRYDYRRSAFGHPWDDRND APGGHNGCDTRDDILDRDLVDKTYVSIKRCPNAVATGTLRDPYTNTTVAFQRGASVGQSVQIDHIVPLSYAWDMGAYRWP NSERMRFANDPANLLAVQGQANQDKGDSPPAQWMPPNKAFACQYAMQFIAVLRGYSLPVDQPSSDVLRQAAATCPTG >Mature_237_residues MNRRTLLWLSAIAALALVVAYQTLGSSAGRHADEFAARAGVPTVQPGADVLAGIAVLPKRIHRYDYRRSAFGHPWDDRND APGGHNGCDTRDDILDRDLVDKTYVSIKRCPNAVATGTLRDPYTNTTVAFQRGASVGQSVQIDHIVPLSYAWDMGAYRWP NSERMRFANDPANLLAVQGQANQDKGDSPPAQWMPPNKAFACQYAMQFIAVLRGYSLPVDQPSSDVLRQAAATCPTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25856; Mature: 25856
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRTLLWLSAIAALALVVAYQTLGSSAGRHADEFAARAGVPTVQPGADVLAGIAVLPKR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IHRYDYRRSAFGHPWDDRNDAPGGHNGCDTRDDILDRDLVDKTYVSIKRCPNAVATGTLR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC DPYTNTTVAFQRGASVGQSVQIDHIVPLSYAWDMGAYRWPNSERMRFANDPANLLAVQGQ CCCCCCHHEECCCCCCCCCEEECEEECCHHHHCCCCEECCCCCCCEECCCCCCEEEECCC ANQDKGDSPPAQWMPPNKAFACQYAMQFIAVLRGYSLPVDQPSSDVLRQAAATCPTG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MNRRTLLWLSAIAALALVVAYQTLGSSAGRHADEFAARAGVPTVQPGADVLAGIAVLPKR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH IHRYDYRRSAFGHPWDDRNDAPGGHNGCDTRDDILDRDLVDKTYVSIKRCPNAVATGTLR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC DPYTNTTVAFQRGASVGQSVQIDHIVPLSYAWDMGAYRWPNSERMRFANDPANLLAVQGQ CCCCCCHHEECCCCCCCCCEEECEEECCHHHHCCCCEECCCCCCCEECCCCCCEEEECCC ANQDKGDSPPAQWMPPNKAFACQYAMQFIAVLRGYSLPVDQPSSDVLRQAAATCPTG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA