Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is 148824162

Identifier: 148824162

GI number: 148824162

Start: 3338496

End: 3339209

Strand: Reverse

Name: 148824162

Synonym: TBFG_12987

Alternate gene names: NA

Gene position: 3339209-3338496 (Counterclockwise)

Preceding gene: 148824163

Following gene: 148824160

Centisome position: 75.47

GC content: 65.41

Gene sequence:

>714_bases
ATGAACCGCAGAACGCTACTGTGGCTGTCGGCGATCGCGGCGCTGGCGCTGGTGGTCGCGTATCAGACGCTGGGATCATC
GGCGGGCAGGCACGCTGACGAGTTCGCCGCCCGCGCTGGCGTGCCAACCGTGCAACCCGGTGCCGACGTGCTCGCCGGCA
TCGCCGTGCTACCCAAACGGATCCACCGCTACGACTACCGCAGGTCCGCATTCGGTCACCCCTGGGACGATCGCAATGAC
GCGCCGGGAGGGCACAACGGGTGCGACACCCGCGACGACATCCTCGACCGGGATCTGGTCGACAAGACATATGTGTCGAT
CAAGCGGTGTCCGAATGCGGTGGCCACCGGCACCCTGCGCGATCCGTACACCAACACCACCGTTGCCTTCCAACGCGGCG
CCAGTGTTGGCCAATCGGTCCAGATCGACCACATCGTTCCGCTCTCGTATGCCTGGGACATGGGCGCCTATCGGTGGCCG
AACTCCGAGCGAATGCGCTTCGCCAACGATCCGGCCAACCTGCTGGCCGTGCAGGGGCAGGCAAATCAGGACAAGGGCGA
TTCGCCACCGGCCCAATGGATGCCACCCAACAAGGCCTTCGCCTGTCAGTACGCGATGCAATTCATCGCCGTGCTGCGCG
GCTATTCACTGCCAGTGGATCAGCCATCGTCCGACGTACTGCGTCAGGCCGCGGCCACCTGCCCGACGGGCTAG

Upstream 100 bases:

>100_bases
ACTTCTGCATCGAGGCTTACAAGAACCCCACAGACCCCGCATTGGCGCTGATGGCCGCGCGATTCACCAGCACCGACCGC
ATCGAATACTTAGATAAGTC

Downstream 100 bases:

>100_bases
TCCACGCGCCGACGGTGAATCTCACGACGTGACACGCCGAGGAGACGTCGCGCGGTTCACAGTCGGCGGCGTATCAGGTG
CCGGCGTAGGTCAGTGGATC

Product: membrane or exported protein

Products: NA

Alternate protein names: Lipoprotein; Extracellular Deoxyribonuclease; S-Layer Domain-Containing Protein; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III; Excalibur Domain-Containing Protein; Excalibur Domain Protein; Conserved Membrane Protein; S-Layer Domain Protein; Cation Transport ATPase

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MNRRTLLWLSAIAALALVVAYQTLGSSAGRHADEFAARAGVPTVQPGADVLAGIAVLPKRIHRYDYRRSAFGHPWDDRND
APGGHNGCDTRDDILDRDLVDKTYVSIKRCPNAVATGTLRDPYTNTTVAFQRGASVGQSVQIDHIVPLSYAWDMGAYRWP
NSERMRFANDPANLLAVQGQANQDKGDSPPAQWMPPNKAFACQYAMQFIAVLRGYSLPVDQPSSDVLRQAAATCPTG

Sequences:

>Translated_237_residues
MNRRTLLWLSAIAALALVVAYQTLGSSAGRHADEFAARAGVPTVQPGADVLAGIAVLPKRIHRYDYRRSAFGHPWDDRND
APGGHNGCDTRDDILDRDLVDKTYVSIKRCPNAVATGTLRDPYTNTTVAFQRGASVGQSVQIDHIVPLSYAWDMGAYRWP
NSERMRFANDPANLLAVQGQANQDKGDSPPAQWMPPNKAFACQYAMQFIAVLRGYSLPVDQPSSDVLRQAAATCPTG
>Mature_237_residues
MNRRTLLWLSAIAALALVVAYQTLGSSAGRHADEFAARAGVPTVQPGADVLAGIAVLPKRIHRYDYRRSAFGHPWDDRND
APGGHNGCDTRDDILDRDLVDKTYVSIKRCPNAVATGTLRDPYTNTTVAFQRGASVGQSVQIDHIVPLSYAWDMGAYRWP
NSERMRFANDPANLLAVQGQANQDKGDSPPAQWMPPNKAFACQYAMQFIAVLRGYSLPVDQPSSDVLRQAAATCPTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25856; Mature: 25856

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRTLLWLSAIAALALVVAYQTLGSSAGRHADEFAARAGVPTVQPGADVLAGIAVLPKR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
IHRYDYRRSAFGHPWDDRNDAPGGHNGCDTRDDILDRDLVDKTYVSIKRCPNAVATGTLR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
DPYTNTTVAFQRGASVGQSVQIDHIVPLSYAWDMGAYRWPNSERMRFANDPANLLAVQGQ
CCCCCCHHEECCCCCCCCCEEECEEECCHHHHCCCCEECCCCCCCEECCCCCCEEEECCC
ANQDKGDSPPAQWMPPNKAFACQYAMQFIAVLRGYSLPVDQPSSDVLRQAAATCPTG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNRRTLLWLSAIAALALVVAYQTLGSSAGRHADEFAARAGVPTVQPGADVLAGIAVLPKR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
IHRYDYRRSAFGHPWDDRNDAPGGHNGCDTRDDILDRDLVDKTYVSIKRCPNAVATGTLR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
DPYTNTTVAFQRGASVGQSVQIDHIVPLSYAWDMGAYRWPNSERMRFANDPANLLAVQGQ
CCCCCCHHEECCCCCCCCCEEECEEECCHHHHCCCCEECCCCCCCEECCCCCCEEEECCC
ANQDKGDSPPAQWMPPNKAFACQYAMQFIAVLRGYSLPVDQPSSDVLRQAAATCPTG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA