| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is recG
Identifier: 148824163
GI number: 148824163
Start: 3339206
End: 3341419
Strand: Reverse
Name: recG
Synonym: TBFG_12988
Alternate gene names: 148824163
Gene position: 3341419-3339206 (Counterclockwise)
Preceding gene: 148824164
Following gene: 148824162
Centisome position: 75.52
GC content: 64.59
Gene sequence:
>2214_bases GTGGCGTCGTTAAGCGATCGGCTCGATCGCGTCCTCGGCGCCACGGCAGCCGATGCCCTCGACGAGCAGTTCGGCATGCG GACCGTCGACGACCTGCTCCGCCACTACCCGCGCAGCTACGTCGAGGGCGCGGCGCGGGTGGGTATCGGTGACGCGCGAC CGGAAGCTGGCGAGCACATCACCATCGTCGACGTGATCACCGATACGTATTCGTTTCCGATGAAAAAGAAGCCGAATCGG AAATGTCTGCGCATCACCGTCGGCGGCGGCCGCAACAAGGTGACGGCCACGTTCTTCAACGCGGACTACATCATGCGGGA CCTCACCAAGCACACGAAGGTGATGCTCTCCGGGGAAGTCGGCTACTACAAGGGCGCGATGCAGCTCACGCATCCGGCGT TTCTCATCCTCGACTCGCCGGACGGGAAGAACCACGGCACCAGGTCGCTCAAAAGTATCGCTGATGCCTCCAAGGCCATC AGCGGTGAATTGGTCGTGGAGGAGTTCGAGCGTCGTTTCTTCCCGATCTATCCGGCCAGCACAAAAGTGCAGAGCTGGGA CATCTTCAAATGCGTGCGGCAGGTGCTCGATGTTCTCGACCGGGTCGATGATCCGTTGCCCGCGGAACTACGCGCCAAGC ACGGCCTGATCCCCGAGGACGAGGCACTGCGCGCCATTCACCTTGCCGAAAGCCAGTCGTTACGCGAGCGCGCCCGGGAA CGCCTGACCTTCGACGAGGCCGTGGGTCTGCAGTGGGCGCTGGTGGCCCGACGGCACGGTGAACTGTCGGAATCCGGGCC CTCGGCGGCCTGGAAATCTAACGGTCTTGCCGCTGAGCTACTGCGGCGGTTGCCTTTTGAGCTGACGGCGGGACAGCGTG AGGTGCTCGACGTGTTGTCCGACGGGCTCGCGGCGAACCGCCCGCTGAATCGCCTGCTGCAAGGCGAAGTGGGCTCGGGC AAAACGATCGTTGCGGTGTTGGCGATGCTGCAGATGGTGGACGCGGGTTACCAGTGTGCCCTGCTGGCGCCAACGGAAGT CCTTGCCGCACAACACTTGCGATCGATCCGCGATGTCCTAGGGCCGCTGGCCATGGGCGGCCAACTGGGAGGCGCCGAAA ACGCCACCCGGGTGGCACTGCTCACCGGTTCGATGACGGCAGGGCAGAAGAAGCAAGTTCGCGCCGAAATCGCCAGCGGT CAGGTCGGCATCGTCATCGGCACGCACGCGCTGCTGCAGGAGGCCGTCGACTTTCACAACCTGGGCATGGTGGTGGTCGA CGAGCAACACCGGTTTGGTGTCGAGCAGCGAGATCAGTTGCGCGCCAAGGCCCCCGCCGGCATTACCCCGCACCTGCTGG TGATGACCGCGACGCCGATACCGCGCACGGTCGCGCTGACCGTCTATGGCGACCTGGAAACCTCTACGCTGCGCGAACTT CCGCTCGGGCGCCAGCCGATTGCCACCAACGTCATCTTTGTCAAGGACAAGCCCGCCTGGCTCGACCGCGCCTGGCGGCG CATCATCGAAGAGGCTGCCGCCGGCCGCCAGGCCTATGTGGTGGCGCCCCGCATCGATGAGTCCGACGACACCGACGTTC AAGGCGGCGTCCGACCATCGGCCACTGCCGAAGGCCTGTTCTCCCGGTTGCGTTCCGCCGAGCTCGCAGAGTTGCGGTTG GCGCTCATGCATGGACGGTTGTCGGCCGACGACAAGGACGCTGCGATGGCGGCTTTCCGGGCCGGTGAGGTCGATGTGCT GGTGTGCACCACGGTCATTGAGGTTGGCGTCGATGTCCCCAACGCTACGGTCATGCTGGTGATGGACGCCGACCGGTTCG GCATCAGCCAATTGCACCAGCTGCGCGGCCGCATCGGGCGCGGCGAACATCCCAGCGTGTGTCTGCTGGCCAGCTGGGTG CCGCCGGATACGCCGGCGGGTCAGCGGCTGCGTGCGGTCGCCGGGACAATGGACGGGTTCGCCCTCGCCGATCTGGATCT GAAGGAGCGCAAGGAGGGAGATGTGCTGGGCCGCAACCAATCCGGCAAGGCCATCACGCTGCGGTTGCTGTCATTGGCCG AACACGAGGAATACATAGTGGCCGCGCGGGACTTCTGCATCGAGGCTTACAAGAACCCCACAGACCCCGCATTGGCGCTG ATGGCCGCGCGATTCACCAGCACCGACCGCATCGAATACTTAGATAAGTCATGA
Upstream 100 bases:
>100_bases TCCTGGAACGGCATGTGCACGACCACCATCCAGGCACCGAGCTGGTCTCCTACCGCACCGGACACCGCGGCGACGCGCTG CTGATCGGGGTCGAGTAGCG
Downstream 100 bases:
>100_bases ACCGCAGAACGCTACTGTGGCTGTCGGCGATCGCGGCGCTGGCGCTGGTGGTCGCGTATCAGACGCTGGGATCATCGGCG GGCAGGCACGCTGACGAGTT
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 737; Mature: 736
Protein sequence:
>737_residues MASLSDRLDRVLGATAADALDEQFGMRTVDDLLRHYPRSYVEGAARVGIGDARPEAGEHITIVDVITDTYSFPMKKKPNR KCLRITVGGGRNKVTATFFNADYIMRDLTKHTKVMLSGEVGYYKGAMQLTHPAFLILDSPDGKNHGTRSLKSIADASKAI SGELVVEEFERRFFPIYPASTKVQSWDIFKCVRQVLDVLDRVDDPLPAELRAKHGLIPEDEALRAIHLAESQSLRERARE RLTFDEAVGLQWALVARRHGELSESGPSAAWKSNGLAAELLRRLPFELTAGQREVLDVLSDGLAANRPLNRLLQGEVGSG KTIVAVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSMTAGQKKQVRAEIASG QVGIVIGTHALLQEAVDFHNLGMVVVDEQHRFGVEQRDQLRAKAPAGITPHLLVMTATPIPRTVALTVYGDLETSTLREL PLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRIDESDDTDVQGGVRPSATAEGLFSRLRSAELAELRL ALMHGRLSADDKDAAMAAFRAGEVDVLVCTTVIEVGVDVPNATVMLVMDADRFGISQLHQLRGRIGRGEHPSVCLLASWV PPDTPAGQRLRAVAGTMDGFALADLDLKERKEGDVLGRNQSGKAITLRLLSLAEHEEYIVAARDFCIEAYKNPTDPALAL MAARFTSTDRIEYLDKS
Sequences:
>Translated_737_residues MASLSDRLDRVLGATAADALDEQFGMRTVDDLLRHYPRSYVEGAARVGIGDARPEAGEHITIVDVITDTYSFPMKKKPNR KCLRITVGGGRNKVTATFFNADYIMRDLTKHTKVMLSGEVGYYKGAMQLTHPAFLILDSPDGKNHGTRSLKSIADASKAI SGELVVEEFERRFFPIYPASTKVQSWDIFKCVRQVLDVLDRVDDPLPAELRAKHGLIPEDEALRAIHLAESQSLRERARE RLTFDEAVGLQWALVARRHGELSESGPSAAWKSNGLAAELLRRLPFELTAGQREVLDVLSDGLAANRPLNRLLQGEVGSG KTIVAVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSMTAGQKKQVRAEIASG QVGIVIGTHALLQEAVDFHNLGMVVVDEQHRFGVEQRDQLRAKAPAGITPHLLVMTATPIPRTVALTVYGDLETSTLREL PLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRIDESDDTDVQGGVRPSATAEGLFSRLRSAELAELRL ALMHGRLSADDKDAAMAAFRAGEVDVLVCTTVIEVGVDVPNATVMLVMDADRFGISQLHQLRGRIGRGEHPSVCLLASWV PPDTPAGQRLRAVAGTMDGFALADLDLKERKEGDVLGRNQSGKAITLRLLSLAEHEEYIVAARDFCIEAYKNPTDPALAL MAARFTSTDRIEYLDKS >Mature_736_residues ASLSDRLDRVLGATAADALDEQFGMRTVDDLLRHYPRSYVEGAARVGIGDARPEAGEHITIVDVITDTYSFPMKKKPNRK CLRITVGGGRNKVTATFFNADYIMRDLTKHTKVMLSGEVGYYKGAMQLTHPAFLILDSPDGKNHGTRSLKSIADASKAIS GELVVEEFERRFFPIYPASTKVQSWDIFKCVRQVLDVLDRVDDPLPAELRAKHGLIPEDEALRAIHLAESQSLRERARER LTFDEAVGLQWALVARRHGELSESGPSAAWKSNGLAAELLRRLPFELTAGQREVLDVLSDGLAANRPLNRLLQGEVGSGK TIVAVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSMTAGQKKQVRAEIASGQ VGIVIGTHALLQEAVDFHNLGMVVVDEQHRFGVEQRDQLRAKAPAGITPHLLVMTATPIPRTVALTVYGDLETSTLRELP LGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRIDESDDTDVQGGVRPSATAEGLFSRLRSAELAELRLA LMHGRLSADDKDAAMAAFRAGEVDVLVCTTVIEVGVDVPNATVMLVMDADRFGISQLHQLRGRIGRGEHPSVCLLASWVP PDTPAGQRLRAVAGTMDGFALADLDLKERKEGDVLGRNQSGKAITLRLLSLAEHEEYIVAARDFCIEAYKNPTDPALALM AARFTSTDRIEYLDKS
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain
Homologues:
Organism=Escherichia coli, GI2367254, Length=686, Percent_Identity=36.0058309037901, Blast_Score=356, Evalue=3e-99, Organism=Escherichia coli, GI1787357, Length=411, Percent_Identity=35.5231143552311, Blast_Score=221, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RECG_MYCBO (P64323)
Other databases:
- EMBL: BX248344 - RefSeq: NP_856643.1 - ProteinModelPortal: P64323 - SMR: P64323 - EnsemblBacteria: EBMYCT00000016194 - GeneID: 1093419 - GenomeReviews: BX248333_GR - KEGG: mbo:Mb2998c - GeneTree: EBGT00050000015872 - HOGENOM: HBG747311 - OMA: NKGLQPH - ProtClustDB: PRK10917 - BioCyc: MBOV233413:MB2998C-MONOMER - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - SMART: SM00487 - SMART: SM00490 - TIGRFAMs: TIGR00643
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; SSF50249 Nucleic_acid_OB
EC number: =3.6.4.12
Molecular weight: Translated: 80362; Mature: 80231
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS51192 HELICASE_ATP_BIND_1; PS51194 HELICASE_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLSDRLDRVLGATAADALDEQFGMRTVDDLLRHYPRSYVEGAARVGIGDARPEAGEHI CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCHHHCCCCCCCCCCCCEE TIVDVITDTYSFPMKKKPNRKCLRITVGGGRNKVTATFFNADYIMRDLTKHTKVMLSGEV EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHEEEEECCC GYYKGAMQLTHPAFLILDSPDGKNHGTRSLKSIADASKAISGELVVEEFERRFFPIYPAS CCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCC TKVQSWDIFKCVRQVLDVLDRVDDPLPAELRAKHGLIPEDEALRAIHLAESQSLRERARE CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RLTFDEAVGLQWALVARRHGELSESGPSAAWKSNGLAAELLRRLPFELTAGQREVLDVLS HCCHHHHHCCHHEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCHHHHHHHHH DGLAANRPLNRLLQGEVGSGKTIVAVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVL CCHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH GPLAMGGQLGGAENATRVALLTGSMTAGQKKQVRAEIASGQVGIVIGTHALLQEAVDFHN HHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH LGMVVVDEQHRFGVEQRDQLRAKAPAGITPHLLVMTATPIPRTVALTVYGDLETSTLREL CCEEEEECHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEECCCHHHHHHC PLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRIDESDDTDVQGGVRPS CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC ATAEGLFSRLRSAELAELRLALMHGRLSADDKDAAMAAFRAGEVDVLVCTTVIEVGVDVP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHCCCCC NATVMLVMDADRFGISQLHQLRGRIGRGEHPSVCLLASWVPPDTPAGQRLRAVAGTMDGF CCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCC ALADLDLKERKEGDVLGRNQSGKAITLRLLSLAEHEEYIVAARDFCIEAYKNPTDPALAL EEECCCHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH MAARFTSTDRIEYLDKS HHHHCCCCCHHHHCCCC >Mature Secondary Structure ASLSDRLDRVLGATAADALDEQFGMRTVDDLLRHYPRSYVEGAARVGIGDARPEAGEHI CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCHHHCCCCCCCCCCCCEE TIVDVITDTYSFPMKKKPNRKCLRITVGGGRNKVTATFFNADYIMRDLTKHTKVMLSGEV EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHHEEEEECCC GYYKGAMQLTHPAFLILDSPDGKNHGTRSLKSIADASKAISGELVVEEFERRFFPIYPAS CCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCC TKVQSWDIFKCVRQVLDVLDRVDDPLPAELRAKHGLIPEDEALRAIHLAESQSLRERARE CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RLTFDEAVGLQWALVARRHGELSESGPSAAWKSNGLAAELLRRLPFELTAGQREVLDVLS HCCHHHHHCCHHEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCHHHHHHHHH DGLAANRPLNRLLQGEVGSGKTIVAVLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVL CCHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH GPLAMGGQLGGAENATRVALLTGSMTAGQKKQVRAEIASGQVGIVIGTHALLQEAVDFHN HHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHH LGMVVVDEQHRFGVEQRDQLRAKAPAGITPHLLVMTATPIPRTVALTVYGDLETSTLREL CCEEEEECHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEECCCHHHHHHC PLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRIDESDDTDVQGGVRPS CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCC ATAEGLFSRLRSAELAELRLALMHGRLSADDKDAAMAAFRAGEVDVLVCTTVIEVGVDVP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHCCCCC NATVMLVMDADRFGISQLHQLRGRIGRGEHPSVCLLASWVPPDTPAGQRLRAVAGTMDGF CCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCC ALADLDLKERKEGDVLGRNQSGKAITLRLLSLAEHEEYIVAARDFCIEAYKNPTDPALAL EEECCCHHHCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH MAARFTSTDRIEYLDKS HHHHCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972