| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824027
Identifier: 148824027
GI number: 148824027
Start: 3155273
End: 3156283
Strand: Reverse
Name: 148824027
Synonym: TBFG_12852
Alternate gene names: NA
Gene position: 3156283-3155273 (Counterclockwise)
Preceding gene: 148824028
Following gene: 148824026
Centisome position: 71.34
GC content: 66.27
Gene sequence:
>1011_bases GTGACGACGATCGACCCAAGGAGTGAGCTGGTCGACGGGCGGCGTCGCGCGGGGGCCCGCGTGGACGCCGTCGGTGCCGC TGCGCTGTTGTCGGCCGCTGCCAGGGTCGGGGTAGTCTGCCACGTCCACCCCGATGCCGACACCATCGGCGCCGGATTGG CATTGGCATTGGTGTTGGACGGGTGCGGCAAGCGGGTAGAGGTCAGCTTTGCCGCGCCGGCGACACTGCCCGAGTCGCTG CGTTCGCTGCCGGGCTGCCATCTGCTGGTCCGCCCTGAGGTGATGCGCCGCGATGTCGATTTGGTTGTGACTGTTGACAT TCCGAGTGTTGATCGGCTCGGTGCTCTGGGCGATCTAACTGATTCCGGGCGGGAGCTCCTGGTAATCGACCATCACGCCT CCAACGACCTGTTCGGCACCGCGAATTTCATTGACCCGTCGGCGGATTCCACCACGACGATGGTTGCCGAGATCCTCGAC GCGTGGGGGAAACCGATAGACCCGCGCGTCGCGCACTGCATCTACGCCGGGTTGGCGACCGACACGGGGTCGTTTCGCTG GGCCAGTGTGCGGGGGTATCGGCTGGCGGCGCGGCTGGTAGAGATCGGTGTGGACAACGCCACCGTCAGCAGGACCTTGA TGGACAGCCATCCCTTCACCTGGTTGCCGTTGCTATCGCGGGTGTTGGGTTCGGCGCAGCTGGTGTCCGAGGCGGTCGGT GGCCGCGGGCTGGTTTACGTCGTCGTCGACAACCGGGAGTGGGTCGCTGCGCGCTCGGAGGAAGTGGAAAGCATCGTCGA CATCGTCCGCACCACGCAACAAGCCGAGGTCGCGGCGGTGTTCAAGGAGGTCGAACCGCATCGGTGGTCGGTGTCGATGC GGGCTAAGACCGTGAATTTGGCCGCGGTTGCCTCTGGGTTCGGTGGCGGTGGTCACCGGCTGGCCGCGGGGTATACGACC ACCGGCTCGATCGACGACGCTGTGGCGTCGTTGCGCGCGGCGCTTGGTTAG
Upstream 100 bases:
>100_bases GGGTCGGTGGCGCAATCACCGGCTCCCGGGGGACTGGGTATCAGAACGAGCGACGGACCCGAGGCTGTGGAGGCACCGCT CACTTGCGGGGGAGACACCG
Downstream 100 bases:
>100_bases CCGCCGTTGAGCCAGGTGGGGCACCGCGCGGGCGGCCGTCAGATCGCGCAGCTGGCGTTGCCCGCGCTGGGCGTGCTGGC CGCCGAGCCGCTGTACCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTTIDPRSELVDGRRRAGARVDAVGAAALLSAAARVGVVCHVHPDADTIGAGLALALVLDGCGKRVEVSFAAPATLPESL RSLPGCHLLVRPEVMRRDVDLVVTVDIPSVDRLGALGDLTDSGRELLVIDHHASNDLFGTANFIDPSADSTTTMVAEILD AWGKPIDPRVAHCIYAGLATDTGSFRWASVRGYRLAARLVEIGVDNATVSRTLMDSHPFTWLPLLSRVLGSAQLVSEAVG GRGLVYVVVDNREWVAARSEEVESIVDIVRTTQQAEVAAVFKEVEPHRWSVSMRAKTVNLAAVASGFGGGGHRLAAGYTT TGSIDDAVASLRAALG
Sequences:
>Translated_336_residues MTTIDPRSELVDGRRRAGARVDAVGAAALLSAAARVGVVCHVHPDADTIGAGLALALVLDGCGKRVEVSFAAPATLPESL RSLPGCHLLVRPEVMRRDVDLVVTVDIPSVDRLGALGDLTDSGRELLVIDHHASNDLFGTANFIDPSADSTTTMVAEILD AWGKPIDPRVAHCIYAGLATDTGSFRWASVRGYRLAARLVEIGVDNATVSRTLMDSHPFTWLPLLSRVLGSAQLVSEAVG GRGLVYVVVDNREWVAARSEEVESIVDIVRTTQQAEVAAVFKEVEPHRWSVSMRAKTVNLAAVASGFGGGGHRLAAGYTT TGSIDDAVASLRAALG >Mature_335_residues TTIDPRSELVDGRRRAGARVDAVGAAALLSAAARVGVVCHVHPDADTIGAGLALALVLDGCGKRVEVSFAAPATLPESLR SLPGCHLLVRPEVMRRDVDLVVTVDIPSVDRLGALGDLTDSGRELLVIDHHASNDLFGTANFIDPSADSTTTMVAEILDA WGKPIDPRVAHCIYAGLATDTGSFRWASVRGYRLAARLVEIGVDNATVSRTLMDSHPFTWLPLLSRVLGSAQLVSEAVGG RGLVYVVVDNREWVAARSEEVESIVDIVRTTQQAEVAAVFKEVEPHRWSVSMRAKTVNLAAVASGFGGGGHRLAAGYTTT GSIDDAVASLRAALG
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mgp1/MG371 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003156 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]
EC number: NA
Molecular weight: Translated: 35416; Mature: 35284
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIDPRSELVDGRRRAGARVDAVGAAALLSAAARVGVVCHVHPDADTIGAGLALALVLD CCCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHH GCGKRVEVSFAAPATLPESLRSLPGCHLLVRPEVMRRDVDLVVTVDIPSVDRLGALGDLT CCCCEEEEEECCCCCCHHHHHHCCCCEEEECCHHHHCCCCEEEEEECCCCHHCCCCCCCC DSGRELLVIDHHASNDLFGTANFIDPSADSTTTMVAEILDAWGKPIDPRVAHCIYAGLAT CCCCEEEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DTGSFRWASVRGYRLAARLVEIGVDNATVSRTLMDSHPFTWLPLLSRVLGSAQLVSEAVG CCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCC GRGLVYVVVDNREWVAARSEEVESIVDIVRTTQQAEVAAVFKEVEPHRWSVSMRAKTVNL CCEEEEEEECCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEEEE AAVASGFGGGGHRLAAGYTTTGSIDDAVASLRAALG EEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TTIDPRSELVDGRRRAGARVDAVGAAALLSAAARVGVVCHVHPDADTIGAGLALALVLD CCCCCHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHH GCGKRVEVSFAAPATLPESLRSLPGCHLLVRPEVMRRDVDLVVTVDIPSVDRLGALGDLT CCCCEEEEEECCCCCCHHHHHHCCCCEEEECCHHHHCCCCEEEEEECCCCHHCCCCCCCC DSGRELLVIDHHASNDLFGTANFIDPSADSTTTMVAEILDAWGKPIDPRVAHCIYAGLAT CCCCEEEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DTGSFRWASVRGYRLAARLVEIGVDNATVSRTLMDSHPFTWLPLLSRVLGSAQLVSEAVG CCCCEEEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCC GRGLVYVVVDNREWVAARSEEVESIVDIVRTTQQAEVAAVFKEVEPHRWSVSMRAKTVNL CCEEEEEEECCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEEEEEE AAVASGFGGGGHRLAAGYTTTGSIDDAVASLRAALG EEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7569993; 8253680 [H]