| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is yebQ [C]
Identifier: 148823659
GI number: 148823659
Start: 2775483
End: 2777054
Strand: Direct
Name: yebQ [C]
Synonym: TBFG_12484
Alternate gene names: 148823659
Gene position: 2775483-2777054 (Clockwise)
Preceding gene: 148823658
Following gene: 148823663
Centisome position: 62.73
GC content: 63.1
Gene sequence:
>1572_bases GTGACTGCGGCACCCGACACCGTGGAGGGCGATTCCCACACTGCAATGACACCGCGCCAGCGGCTGACCGTGTTGGCAAC GGGGCTGGGCATCTTCATGGTGTTCGTGGACGTCAACATCGTCAATGTCGCATTGCCCAGCATCCAAAAGGTGTTTCACA CGGGCGAACAAGGTCTGCAGTGGGCGGTCGCCGGGTACAGCCTGGGCATGGCGGCCGTGCTGATGAGTTGCGCCCTGCTG GGCGATCGCTACGGTCGCAGGCGCAGTTTTGTGTTCGGGGTCACGCTCTTCGTCGTGAGCTCTATTGTCTGTGTGCTACC GGTCAGCCTGGCAGTTTTCACGGTCGCACGAGTGATCCAAGGTTTAGGAGCGGCGTTCATCTCAGTGCTCTCGCTGGCCT TGCTAAGCCACTCCTTTCCCAATCCCCGAATGAAAGCACGGGCGATATCCAACTGGATGGCCATAGGCATGGTCGGTGCG GCATCTGCCCCCGCGCTGGGCGGGCTCATGGTCGACGGCCTCGGTTGGCGCAGCGTGTTCCTGGTGAACGTTCCGCTCGG TGCCATCGTGTGGCTGCTGACGCTAGTCGGTGTCGACGAGTCACAGGATCCCGAGCCCACTCAACTCGACTGGGTGGGAC AGCTGACGCTTATCCCGGCCGTCGCCCTGATCGCATACACCATCATCGAGGCTCCCCGGTTCGACCGGCAGTCCGCCGGG TTCGTGGCGGCGTTGCTGTTAGCGGCTGGGGTACTGCTGTGGCTGTTTGTTCGACACGAACACCGCGCCGCTTTCCCGTT GGTCGATCTCAAACTGTTCGCCGAGCCGTTGTACCGATCGGTGCTGATCGTCTACTTCGTGGTGATGTCCTGCTTTTTCG GGACTCTGATGGTGATCACCCAGCACTTCCAAAATGTGCGCGACCTATCGCCGCTGCACGCGGGTTTGATGATGTTGCCG GTCCCCGCGGGATTCGGGGTGGCGAGTCTGCTGGCGGGTAGGGCGGTCAACAAATGGGGTCCTCAGCTCCCGGTGCTGAC GTGCCTGGCGGCCATGTTCATCGGGTTGGCGATTTTCGCGATCTCGATGGACCACGCGCATCCAGTGGCCCTTGTTGGCC TGACGATCTTTGGCGCGGGAGCCGGCGGCTGCGCCACACCGCTGTTGCATCTTGGAATGACCAAGGTCGATGATGGCCGT GCCGGCATGGCCGCCGGGATGCTCAATCTGCAGCGGTCGCTGGGCGGCATTTTCGGCGTCGCCTTCCTGGGCACCATTGT CGCGGCCTGGTTGGGTGCCGCGCTGCCGAACACCATGGCCGACGAAATTCCCGATCCCATCGCTCGCGCGATCGTTGTCG ACGTCATCGTGGACAGCGCGAATCCGCATGCCCACGCGGCATTTATCGGGCCAGGACACCGGATAACTGCGGCGCAGGAG GATGAGATCGTACTGGCCGCCGACGCGGTCTTCGTGAGCGGAATCAAGCTCGCGTTGGGCGGCGCCGCCGTATTGCTGAC CGGCGCGTTCGTCCTTGGTTGGACGCGCTTCCCCCGGACCCCCGCCAGCTAA
Upstream 100 bases:
>100_bases CCTCATCGAGGCGTTACCTAGGGTTAGTTCTTGTGACCGCGAAGCCCGGCTACGCATGAGTAAGAACCGCATTATGGGCA ACCAACCGGAGAAGTCAGAT
Downstream 100 bases:
>100_bases GTGGTCTCGCTCGGTGCGCCCCCACAGTCCCTGCGCCGAGATCGACGTTAGCGTCACGCCTTATGGTGATTTTCCGCTCT GGCGTGGATCTCGGCGCATG
Product: integral membrane transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MTAAPDTVEGDSHTAMTPRQRLTVLATGLGIFMVFVDVNIVNVALPSIQKVFHTGEQGLQWAVAGYSLGMAAVLMSCALL GDRYGRRRSFVFGVTLFVVSSIVCVLPVSLAVFTVARVIQGLGAAFISVLSLALLSHSFPNPRMKARAISNWMAIGMVGA ASAPALGGLMVDGLGWRSVFLVNVPLGAIVWLLTLVGVDESQDPEPTQLDWVGQLTLIPAVALIAYTIIEAPRFDRQSAG FVAALLLAAGVLLWLFVRHEHRAAFPLVDLKLFAEPLYRSVLIVYFVVMSCFFGTLMVITQHFQNVRDLSPLHAGLMMLP VPAGFGVASLLAGRAVNKWGPQLPVLTCLAAMFIGLAIFAISMDHAHPVALVGLTIFGAGAGGCATPLLHLGMTKVDDGR AGMAAGMLNLQRSLGGIFGVAFLGTIVAAWLGAALPNTMADEIPDPIARAIVVDVIVDSANPHAHAAFIGPGHRITAAQE DEIVLAADAVFVSGIKLALGGAAVLLTGAFVLGWTRFPRTPAS
Sequences:
>Translated_523_residues MTAAPDTVEGDSHTAMTPRQRLTVLATGLGIFMVFVDVNIVNVALPSIQKVFHTGEQGLQWAVAGYSLGMAAVLMSCALL GDRYGRRRSFVFGVTLFVVSSIVCVLPVSLAVFTVARVIQGLGAAFISVLSLALLSHSFPNPRMKARAISNWMAIGMVGA ASAPALGGLMVDGLGWRSVFLVNVPLGAIVWLLTLVGVDESQDPEPTQLDWVGQLTLIPAVALIAYTIIEAPRFDRQSAG FVAALLLAAGVLLWLFVRHEHRAAFPLVDLKLFAEPLYRSVLIVYFVVMSCFFGTLMVITQHFQNVRDLSPLHAGLMMLP VPAGFGVASLLAGRAVNKWGPQLPVLTCLAAMFIGLAIFAISMDHAHPVALVGLTIFGAGAGGCATPLLHLGMTKVDDGR AGMAAGMLNLQRSLGGIFGVAFLGTIVAAWLGAALPNTMADEIPDPIARAIVVDVIVDSANPHAHAAFIGPGHRITAAQE DEIVLAADAVFVSGIKLALGGAAVLLTGAFVLGWTRFPRTPAS >Mature_522_residues TAAPDTVEGDSHTAMTPRQRLTVLATGLGIFMVFVDVNIVNVALPSIQKVFHTGEQGLQWAVAGYSLGMAAVLMSCALLG DRYGRRRSFVFGVTLFVVSSIVCVLPVSLAVFTVARVIQGLGAAFISVLSLALLSHSFPNPRMKARAISNWMAIGMVGAA SAPALGGLMVDGLGWRSVFLVNVPLGAIVWLLTLVGVDESQDPEPTQLDWVGQLTLIPAVALIAYTIIEAPRFDRQSAGF VAALLLAAGVLLWLFVRHEHRAAFPLVDLKLFAEPLYRSVLIVYFVVMSCFFGTLMVITQHFQNVRDLSPLHAGLMMLPV PAGFGVASLLAGRAVNKWGPQLPVLTCLAAMFIGLAIFAISMDHAHPVALVGLTIFGAGAGGCATPLLHLGMTKVDDGRA GMAAGMLNLQRSLGGIFGVAFLGTIVAAWLGAALPNTMADEIPDPIARAIVVDVIVDSANPHAHAAFIGPGHRITAAQED EIVLAADAVFVSGIKLALGGAAVLLTGAFVLGWTRFPRTPAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=416, Percent_Identity=29.8076923076923, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1788710, Length=410, Percent_Identity=24.8780487804878, Blast_Score=105, Evalue=9e-24, Organism=Escherichia coli, GI1790195, Length=254, Percent_Identity=30.7086614173228, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1789042, Length=415, Percent_Identity=24.3373493975904, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790146, Length=173, Percent_Identity=29.4797687861272, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1788392, Length=342, Percent_Identity=28.6549707602339, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 54965; Mature: 54834
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAPDTVEGDSHTAMTPRQRLTVLATGLGIFMVFVDVNIVNVALPSIQKVFHTGEQGLQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCE WAVAGYSLGMAAVLMSCALLGDRYGRRRSFVFGVTLFVVSSIVCVLPVSLAVFTVARVIQ EEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGAAFISVLSLALLSHSFPNPRMKARAISNWMAIGMVGAASAPALGGLMVDGLGWRSVF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEE LVNVPLGAIVWLLTLVGVDESQDPEPTQLDWVGQLTLIPAVALIAYTIIEAPRFDRQSAG EEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH FVAALLLAAGVLLWLFVRHEHRAAFPLVDLKLFAEPLYRSVLIVYFVVMSCFFGTLMVIT HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHFQNVRDLSPLHAGLMMLPVPAGFGVASLLAGRAVNKWGPQLPVLTCLAAMFIGLAIFA HHHHHHHHCCHHHHCEEEEECCCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHH ISMDHAHPVALVGLTIFGAGAGGCATPLLHLGMTKVDDGRAGMAAGMLNLQRSLGGIFGV HHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AFLGTIVAAWLGAALPNTMADEIPDPIARAIVVDVIVDSANPHAHAAFIGPGHRITAAQE HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCC DEIVLAADAVFVSGIKLALGGAAVLLTGAFVLGWTRFPRTPAS CCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TAAPDTVEGDSHTAMTPRQRLTVLATGLGIFMVFVDVNIVNVALPSIQKVFHTGEQGLQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCE WAVAGYSLGMAAVLMSCALLGDRYGRRRSFVFGVTLFVVSSIVCVLPVSLAVFTVARVIQ EEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGAAFISVLSLALLSHSFPNPRMKARAISNWMAIGMVGAASAPALGGLMVDGLGWRSVF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCEEE LVNVPLGAIVWLLTLVGVDESQDPEPTQLDWVGQLTLIPAVALIAYTIIEAPRFDRQSAG EEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH FVAALLLAAGVLLWLFVRHEHRAAFPLVDLKLFAEPLYRSVLIVYFVVMSCFFGTLMVIT HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QHFQNVRDLSPLHAGLMMLPVPAGFGVASLLAGRAVNKWGPQLPVLTCLAAMFIGLAIFA HHHHHHHHCCHHHHCEEEEECCCCCCHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHH ISMDHAHPVALVGLTIFGAGAGGCATPLLHLGMTKVDDGRAGMAAGMLNLQRSLGGIFGV HHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH AFLGTIVAAWLGAALPNTMADEIPDPIARAIVVDVIVDSANPHAHAAFIGPGHRITAAQE HHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCC DEIVLAADAVFVSGIKLALGGAAVLLTGAFVLGWTRFPRTPAS CCEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]