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The map label for this gene is rsfA

Identifier: 148661155

GI number: 148661155

Start: 1539093

End: 1539479

Strand: Reverse

Name: rsfA

Synonym: MRA_1374

Alternate gene names: NA

Gene position: 1539479-1539093 (Counterclockwise)

Preceding gene: 148661158

Following gene: 148661154

Centisome position: 34.83

GC content: 65.12

Gene sequence:

>387_bases
ATGAACCCGACTCAGGCAGGGTCATTCACTACTCCGGTGAGCAACGCGCTCAAGGCGACCATCCAGCACCACGACTCGGC
TGTGATTATCCATGCGCGTGGCGAGATCGACGCCGCCAATGAGCACACTTGGCAAGATCTGGTCACGAAGGCGGCCGCGG
CCACCACCGCGCCGGAACCACTCGTGGTCAACCTCAACGGCCTCGATTTCATGGGCTGCTGCGCAGTCGCCGTCCTTGCT
CACGAGGCCGAACGGTGTCGACGCCGGGGCGTGGACGTGCGCCTGGTAAGCCGCGACCGTGCTGTCGCGCGCATCATCCA
CGCCTGCGGATACGGCGACGTGCTGCCCGTACACCCGACCACGGAGTCCGCGCTGTCAGCGACATAA

Upstream 100 bases:

>100_bases
GGAGCGGGCCGGCCTTGCTATACAAAGACGACGGTTTTCCGCGGCGCGCAGGACCGGCAATCCAATTGGGGGCTCGGGTG
CCGCCGATGAGGAGTGCACC

Downstream 100 bases:

>100_bases
GTGGCGGCCTGCCCCAAACGCACTTTTGCTTTTCCGGCAAGCTGGTAGGGCACGTTGATAACCTGGTTGCGTTGCCTGGC
GAATTGGTCTGCGCACGTTG

Product: anti-anti-sigma factor RsfA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MNPTQAGSFTTPVSNALKATIQHHDSAVIIHARGEIDAANEHTWQDLVTKAAAATTAPEPLVVNLNGLDFMGCCAVAVLA
HEAERCRRRGVDVRLVSRDRAVARIIHACGYGDVLPVHPTTESALSAT

Sequences:

>Translated_128_residues
MNPTQAGSFTTPVSNALKATIQHHDSAVIIHARGEIDAANEHTWQDLVTKAAAATTAPEPLVVNLNGLDFMGCCAVAVLA
HEAERCRRRGVDVRLVSRDRAVARIIHACGYGDVLPVHPTTESALSAT
>Mature_128_residues
MNPTQAGSFTTPVSNALKATIQHHDSAVIIHARGEIDAANEHTWQDLVTKAAAATTAPEPLVVNLNGLDFMGCCAVAVLA
HEAERCRRRGVDVRLVSRDRAVARIIHACGYGDVLPVHPTTESALSAT

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1365_MYCTU (Q11035)

Other databases:

- EMBL:   BX842576
- EMBL:   AE000516
- PIR:   D70742
- RefSeq:   NP_215881.1
- RefSeq:   NP_335860.1
- ProteinModelPortal:   Q11035
- SMR:   Q11035
- IntAct:   Q11035
- EnsemblBacteria:   EBMYCT00000000222
- EnsemblBacteria:   EBMYCT00000069848
- GeneID:   886794
- GeneID:   924588
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT1411
- KEGG:   mtu:Rv1365c
- TIGR:   MT1411
- TubercuList:   Rv1365c
- GeneTree:   EBGT00050000016723
- HOGENOM:   HBG565661
- OMA:   EHIDISA
- ProtClustDB:   CLSK791124
- InterPro:   IPR003658
- InterPro:   IPR002645
- Gene3D:   G3DSA:3.30.750.24
- TIGRFAMs:   TIGR00377

Pfam domain/function: PF01740 STAS; SSF52091 STAS

EC number: NA

Molecular weight: Translated: 13590; Mature: 13590

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTQAGSFTTPVSNALKATIQHHDSAVIIHARGEIDAANEHTWQDLVTKAAAATTAPEP
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC
LVVNLNGLDFMGCCAVAVLAHEAERCRRRGVDVRLVSRDRAVARIIHACGYGDVLPVHPT
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEECCCC
TESALSAT
CCHHCCCC
>Mature Secondary Structure
MNPTQAGSFTTPVSNALKATIQHHDSAVIIHARGEIDAANEHTWQDLVTKAAAATTAPEP
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC
LVVNLNGLDFMGCCAVAVLAHEAERCRRRGVDVRLVSRDRAVARIIHACGYGDVLPVHPT
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCEEECCCC
TESALSAT
CCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036