| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653586
Identifier: 148653586
GI number: 148653586
Start: 2217961
End: 2219151
Strand: Direct
Name: 148653586
Synonym: PsycPRwf_1789
Alternate gene names: NA
Gene position: 2217961-2219151 (Clockwise)
Preceding gene: 148653585
Following gene: 148653588
Centisome position: 74.45
GC content: 45.51
Gene sequence:
>1191_bases ATGAAAGTGATGCGCCTGCTCTCTTCTTTAAAGCACGATGAATCCGAACGAGGGATTTTTCATCTTGGCCGCGCCTTGGT AAAACGGGGACACACCTCGATTATTATCTCCTCAGCTGACAAAGAGCACGACTTGGTCAAGCGCCTTGAGCGTGATGGTA ACATCTATAATCAGCTGTCTTTAGAAAAGAAGTCTTGGCTGGCGCTACGCCAAGTGCTGCCGCTTCGCAGGCTTATTGAG AAGCATCAGCCGGATATTATTCATATCCATTCACGCACGCCGGCTTGGATATTGCATTGGGCATTAAAAGGTGCCAAGGT TAAGCGAAAACCTAAGCTTGTGGCGACCATGTATGGCTTTTATCCACTTAATAATTACTCGCGCGCGCTGCTTAATGTCG ACCGTTTAATTACCGTCTCTGATAGCGTCAGTGATTATCTGATGCAGGGACTCAAAGAGCTAAAAAACCCACCCCGCTCT ATTACTCGTATCTATCGAGGCGTCGATACCCGCAGCTTTCCTTACCGTTACAACCCTTCTGTGTACTGGCTACGCCGCAC TTTTGCTGAATATCCTGAGCTTGAGCACAAAAAGTGGCTACTGTTTCCCACCATCATAGGGCAAGAGTATGGACAAGAGT GGCTGATAGATGTGGTGGGTAATTTGGGTGAGGCTTTTCCCAATATTCATATTATTATTATGGATGATGAGTCGCGTCAT GGTGTGGTGCACGATGAATTTTTACAGCGGGTTAATGCGTTAGAGCTTCAAGATAAGTTCACCTTCATTGGCTCTAAACG CAATGACATGCGTGAGTGGCTGGCAGCGGCCAACTTAGTGCTGGGCCTTGCCAATCAACCTGAATCTATTGGTATTAATA TCTTACAAGCTATTCACTTAGGCACGCCTGTGGTGGGCTGGAACAAAGCTGCTTTTAATGAGATTTTGCGTCCTTTATAC CCGCAAGGTTTGGTCAAAGAAAATACAGCCTACGCACTGTGTAAAGTTATTCGCAGCCAATTAGAGAATGTGATGCGCCC CTCTATCACAGATAAATTCACCATGCAGCAAATGATTGATGAGACTTTAGAGGTGTATAGCACGTTATATGATGCCAACC AGCTCAGCTACAGTGATACGTTTATTGAAAAAAAGCGGCTGAAAAAAAAGGCGCAGCAAAACTTACGATGA
Upstream 100 bases:
>100_bases CCAGTGTTCTAAACACCATATAAGGGGCTCCAATCAAAAGCCTTAAAACCCTATATGGTTTACTCAATCGTTCAATTACT CCACTGACTCAGTTGCCCTT
Downstream 100 bases:
>100_bases CAAGGATAGCAGAAGAATAGTAGAAGGAGCGTAGACAGCTACTTAGTTTGAATGTGAGTGTCTGTTGTGTCAACAAGCCG ATGCTTATTAAAGTTAATGC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Lipopolysaccharide Biosynthesis Protein; Glycosyltransferase Protein
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKVMRLLSSLKHDESERGIFHLGRALVKRGHTSIIISSADKEHDLVKRLERDGNIYNQLSLEKKSWLALRQVLPLRRLIE KHQPDIIHIHSRTPAWILHWALKGAKVKRKPKLVATMYGFYPLNNYSRALLNVDRLITVSDSVSDYLMQGLKELKNPPRS ITRIYRGVDTRSFPYRYNPSVYWLRRTFAEYPELEHKKWLLFPTIIGQEYGQEWLIDVVGNLGEAFPNIHIIIMDDESRH GVVHDEFLQRVNALELQDKFTFIGSKRNDMREWLAAANLVLGLANQPESIGINILQAIHLGTPVVGWNKAAFNEILRPLY PQGLVKENTAYALCKVIRSQLENVMRPSITDKFTMQQMIDETLEVYSTLYDANQLSYSDTFIEKKRLKKKAQQNLR
Sequences:
>Translated_396_residues MKVMRLLSSLKHDESERGIFHLGRALVKRGHTSIIISSADKEHDLVKRLERDGNIYNQLSLEKKSWLALRQVLPLRRLIE KHQPDIIHIHSRTPAWILHWALKGAKVKRKPKLVATMYGFYPLNNYSRALLNVDRLITVSDSVSDYLMQGLKELKNPPRS ITRIYRGVDTRSFPYRYNPSVYWLRRTFAEYPELEHKKWLLFPTIIGQEYGQEWLIDVVGNLGEAFPNIHIIIMDDESRH GVVHDEFLQRVNALELQDKFTFIGSKRNDMREWLAAANLVLGLANQPESIGINILQAIHLGTPVVGWNKAAFNEILRPLY PQGLVKENTAYALCKVIRSQLENVMRPSITDKFTMQQMIDETLEVYSTLYDANQLSYSDTFIEKKRLKKKAQQNLR >Mature_396_residues MKVMRLLSSLKHDESERGIFHLGRALVKRGHTSIIISSADKEHDLVKRLERDGNIYNQLSLEKKSWLALRQVLPLRRLIE KHQPDIIHIHSRTPAWILHWALKGAKVKRKPKLVATMYGFYPLNNYSRALLNVDRLITVSDSVSDYLMQGLKELKNPPRS ITRIYRGVDTRSFPYRYNPSVYWLRRTFAEYPELEHKKWLLFPTIIGQEYGQEWLIDVVGNLGEAFPNIHIIIMDDESRH GVVHDEFLQRVNALELQDKFTFIGSKRNDMREWLAAANLVLGLANQPESIGINILQAIHLGTPVVGWNKAAFNEILRPLY PQGLVKENTAYALCKVIRSQLENVMRPSITDKFTMQQMIDETLEVYSTLYDANQLSYSDTFIEKKRLKKKAQQNLR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46042; Mature: 46042
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVMRLLSSLKHDESERGIFHLGRALVKRGHTSIIISSADKEHDLVKRLERDGNIYNQLS CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHH LEKKSWLALRQVLPLRRLIEKHQPDIIHIHSRTPAWILHWALKGAKVKRKPKLVATMYGF HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHCC YPLNNYSRALLNVDRLITVSDSVSDYLMQGLKELKNPPRSITRIYRGVDTRSFPYRYNPS CCCCHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECCC VYWLRRTFAEYPELEHKKWLLFPTIIGQEYGQEWLIDVVGNLGEAFPNIHIIIMDDESRH HHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC GVVHDEFLQRVNALELQDKFTFIGSKRNDMREWLAAANLVLGLANQPESIGINILQAIHL CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC GTPVVGWNKAAFNEILRPLYPQGLVKENTAYALCKVIRSQLENVMRPSITDKFTMQQMID CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ETLEVYSTLYDANQLSYSDTFIEKKRLKKKAQQNLR HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVMRLLSSLKHDESERGIFHLGRALVKRGHTSIIISSADKEHDLVKRLERDGNIYNQLS CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHH LEKKSWLALRQVLPLRRLIEKHQPDIIHIHSRTPAWILHWALKGAKVKRKPKLVATMYGF HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHCC YPLNNYSRALLNVDRLITVSDSVSDYLMQGLKELKNPPRSITRIYRGVDTRSFPYRYNPS CCCCHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEECCC VYWLRRTFAEYPELEHKKWLLFPTIIGQEYGQEWLIDVVGNLGEAFPNIHIIIMDDESRH HHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC GVVHDEFLQRVNALELQDKFTFIGSKRNDMREWLAAANLVLGLANQPESIGINILQAIHL CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC GTPVVGWNKAAFNEILRPLYPQGLVKENTAYALCKVIRSQLENVMRPSITDKFTMQQMID CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ETLEVYSTLYDANQLSYSDTFIEKKRLKKKAQQNLR HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA