| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653585
Identifier: 148653585
GI number: 148653585
Start: 2216856
End: 2217707
Strand: Direct
Name: 148653585
Synonym: PsycPRwf_1788
Alternate gene names: NA
Gene position: 2216856-2217707 (Clockwise)
Preceding gene: 148653584
Following gene: 148653586
Centisome position: 74.42
GC content: 46.24
Gene sequence:
>852_bases ATGACCCAATCCCTCATCACCAACACCGCGCCTATTATTGTGTACCCTTCAAGCTTTGAGGGGTGGCTTAGCGCAGTTTT TTATGTGTATGAGCAGCGACTGCAAAATCAGCCTTATTTGCAGTGGGCCGACCAGCGCAGCTACCAGCTGTCACTTATTG ATACTGCTCACTACGTTGATTTCGATGAAGATAAGGCGCAGCGGGTGTTAGTTAAGCTCCATGCTTTATTCGGCCACTCA GGTATGCGCCAAATTTTATGGGGGTTTTTATCAGAGCAGTCCGATATTGGCGCTGTATTGTTCCAAGTGATTAAATATGC GCTAGATTTTCCTGCTCGGCAAGTACTACAAGATTTGGGGCATATGGCGGTACTTGAGCTGTCCAAAATTGTAAAATCTG TGGGGCGTGAAAAACACCGAATGGAGGCGTTTGTACGCTTTGAGCATACGACAGAAGATATTTATTTTTCGCGCGTAGAG CCGGACTTTAATGTCCTACCACTGATTGGAGAGCACTTTCGGCAGCGCTATCAAGATCAAAACTGGGCCATCTATGATTT GGTGCGTGGTTATGGTATTTATTATGACAAAAGCCAATCGACGCAAGCGGGCCCCGCACCCTTACAGCTTATCTCAGAGC TTGATGATCAAGTGATACACAATCCTGCCAGTATTCACAGTGAACAAGAGCTGCGTTATCAAAGGTTTTGGCAAGGCTAT TTTGCCAATGTGACCATTAAAGAGCGCAAAAACCCTCGGCTACACAAGCAGTATTTGCCGCAGCGTTACTGGAAATACCT CACTGAAAAACAAGTGTTGTCAACGGCGGCTCATTTGTCCGAATCACGTTAG
Upstream 100 bases:
>100_bases TTTGTGCTGGGGCAAACCCAAACCAAGTTTGGCGATCAGCGCAGTGGCCAACTGGCGCTATTTTAGACAGCCCGCTTGAT GAAATAGATAGGTGACACCT
Downstream 100 bases:
>100_bases CCTGATAAGTTTTATTGGTCGTCTCAGCCTTGTTTTTTGGTGCATTTTGACTGACAATGTGGCCGGCTATTCATTAGACG CTTTCAATTGCGTCCGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTQSLITNTAPIIVYPSSFEGWLSAVFYVYEQRLQNQPYLQWADQRSYQLSLIDTAHYVDFDEDKAQRVLVKLHALFGHS GMRQILWGFLSEQSDIGAVLFQVIKYALDFPARQVLQDLGHMAVLELSKIVKSVGREKHRMEAFVRFEHTTEDIYFSRVE PDFNVLPLIGEHFRQRYQDQNWAIYDLVRGYGIYYDKSQSTQAGPAPLQLISELDDQVIHNPASIHSEQELRYQRFWQGY FANVTIKERKNPRLHKQYLPQRYWKYLTEKQVLSTAAHLSESR
Sequences:
>Translated_283_residues MTQSLITNTAPIIVYPSSFEGWLSAVFYVYEQRLQNQPYLQWADQRSYQLSLIDTAHYVDFDEDKAQRVLVKLHALFGHS GMRQILWGFLSEQSDIGAVLFQVIKYALDFPARQVLQDLGHMAVLELSKIVKSVGREKHRMEAFVRFEHTTEDIYFSRVE PDFNVLPLIGEHFRQRYQDQNWAIYDLVRGYGIYYDKSQSTQAGPAPLQLISELDDQVIHNPASIHSEQELRYQRFWQGY FANVTIKERKNPRLHKQYLPQRYWKYLTEKQVLSTAAHLSESR >Mature_282_residues TQSLITNTAPIIVYPSSFEGWLSAVFYVYEQRLQNQPYLQWADQRSYQLSLIDTAHYVDFDEDKAQRVLVKLHALFGHSG MRQILWGFLSEQSDIGAVLFQVIKYALDFPARQVLQDLGHMAVLELSKIVKSVGREKHRMEAFVRFEHTTEDIYFSRVEP DFNVLPLIGEHFRQRYQDQNWAIYDLVRGYGIYYDKSQSTQAGPAPLQLISELDDQVIHNPASIHSEQELRYQRFWQGYF ANVTIKERKNPRLHKQYLPQRYWKYLTEKQVLSTAAHLSESR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33328; Mature: 33197
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSLITNTAPIIVYPSSFEGWLSAVFYVYEQRLQNQPYLQWADQRSYQLSLIDTAHYVD CCCCHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEHHHHCC FDEDKAQRVLVKLHALFGHSGMRQILWGFLSEQSDIGAVLFQVIKYALDFPARQVLQDLG CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH HMAVLELSKIVKSVGREKHRMEAFVRFEHTTEDIYFSRVEPDFNVLPLIGEHFRQRYQDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCHHHHHHHHHHHHCCC NWAIYDLVRGYGIYYDKSQSTQAGPAPLQLISELDDQVIHNPASIHSEQELRYQRFWQGY CCHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH FANVTIKERKNPRLHKQYLPQRYWKYLTEKQVLSTAAHLSESR HCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQSLITNTAPIIVYPSSFEGWLSAVFYVYEQRLQNQPYLQWADQRSYQLSLIDTAHYVD CCCHHCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEEEEHHHHCC FDEDKAQRVLVKLHALFGHSGMRQILWGFLSEQSDIGAVLFQVIKYALDFPARQVLQDLG CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH HMAVLELSKIVKSVGREKHRMEAFVRFEHTTEDIYFSRVEPDFNVLPLIGEHFRQRYQDQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCHHHHHHHHHHHHCCC NWAIYDLVRGYGIYYDKSQSTQAGPAPLQLISELDDQVIHNPASIHSEQELRYQRFWQGY CCHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH FANVTIKERKNPRLHKQYLPQRYWKYLTEKQVLSTAAHLSESR HCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA