| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653580
Identifier: 148653580
GI number: 148653580
Start: 2210420
End: 2211934
Strand: Direct
Name: 148653580
Synonym: PsycPRwf_1783
Alternate gene names: NA
Gene position: 2210420-2211934 (Clockwise)
Preceding gene: 148653579
Following gene: 148653583
Centisome position: 74.2
GC content: 49.44
Gene sequence:
>1515_bases ATGAAAGCACATGTGCCGCCTTTTTTATCTGTTAAACCGGCTTTACTTACCACCGCCTTGTTGGCCACATTCACCATGGG CGCCGCTTTTGCTCAAGCTGCCACAGAGATGCCCAGCGGTGAGCATGCCAGCGCTGATGTGGACATCACGCAGCCAATCA AAGCCATCGATAAGCTTGAGAGCTTAAAAAACGAGCAAAAGCTTAGCCTATCCATTCCCAAGTTTCAGCACTTCACCACC AGTAACGGTGTCCCTGTGATATTCGTCCAGACCAAGCAGCTGCCCATTGTCGATGTGGATTTGCGCTTTAACGCAGGCAG TGCCCGTGATGAGAGTATTCGCAAACAAGGCTTTGGGCTGGCCAGCATGGTCGCCGACTTACTCACCAAAGGCACCAGAG ATCTTGATGAGACGGCATTCGCTGAAGCGACTGAGCAGCTTGGGATTGAGCTATCCAGCGCCGCTTACAAAGACCAATTT GTGGTAAATTTGCGCAGCTTATCTGACGCTGAGCATCTAGACCCTGCCTTGTCCTTGATGAGCAGTATAATCACCCAGCC GCGCTTTGATGCGCAAGTGCTCGAGCGCAGTAAGGCCCAGCAAGTACTGGCGCTCAAACAAATGATGCAAAACCCCTCCT ATTTAGCCAGTACCACCTTTAGCCAGACCCTGTACGGCTCGCATCCTTATGCCCATTCCCCTTATGGCACGCAGCAAAGC ATTCCTGCTTTGACCCGTAATGATTTACAGAAGTTTCATGACACCTACTTTGTGGCGCAAAACGCCACTTTAAGTCTTAC TGGAGATCTAAGCTTATCGCAGGCAAAACAGGCAGCAGAAGCCATTACCCAAGCACTGCCTCAAGGTAAGCCGGCGCCCA AATTACCCAATCCTACCCCCATTAAACAAAGCAAGTGGGTGCATGTCGATTATGACAGCGACCAAACCTCAGTGATGATC GGTCAACAAGGCTATCGCATAGACCCTAGTGCCAAGGGCATACAGCGTGGCACTGACTTTAGTATAGGTAATGAAGTGCT CGCCGGTAGTGGCTTTAGCTCACGCCTCATGGGTAAAGTGCGCAAGGAGCTTGGTTATACCTATGGTATTTATGGCAGTA TGACCCCGATGCAAGCACCAGGCCCTTATACCATCCGTTTCTCAACCCGTAATGAAAAAGCCGATGAGGCCATCGCCGCT ACATTACAGACGGTCAATGACACCTTAAAACAAGGCATCACCGCTCAAGAATTTAAACTGACCCAAGAGAGTCTGATTAA CAGCTATCCGATGGGCTTTGCCAGTAATGCCGGTATCAACGGTATGCTGGGTGTGCTTAATTTTAATAAGCTGCCTGACT CGTATATTACTGACTACATCAATAGAGTCGAAGGTGCACGTATCGACCAGGTCAATACTGCCCTACGTGACACCCTGACC CCAGATAAATTTATCATCGTCACTGTGGGCAAGCCCGACATTGCAAAAAAATCACAACTACAAAAGCTTAAGTAG
Upstream 100 bases:
>100_bases AAAACCGCTAATTATGCGCCAATAAACGCCAGACCAATTGCCATTGACCACCAATAAAACACCCTTTTTAAAAATATAAA ACCTAATTACGGATTTTGTT
Downstream 100 bases:
>100_bases AGTACTGCCTTTTATTGGCGCTCTTTATATATCTAAGCGCAAAAAAAAGACACCCGCTTTACGTGGGTGTCTTTTTTTGT GGGTAGGCTGCTTAAATGGT
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MKAHVPPFLSVKPALLTTALLATFTMGAAFAQAATEMPSGEHASADVDITQPIKAIDKLESLKNEQKLSLSIPKFQHFTT SNGVPVIFVQTKQLPIVDVDLRFNAGSARDESIRKQGFGLASMVADLLTKGTRDLDETAFAEATEQLGIELSSAAYKDQF VVNLRSLSDAEHLDPALSLMSSIITQPRFDAQVLERSKAQQVLALKQMMQNPSYLASTTFSQTLYGSHPYAHSPYGTQQS IPALTRNDLQKFHDTYFVAQNATLSLTGDLSLSQAKQAAEAITQALPQGKPAPKLPNPTPIKQSKWVHVDYDSDQTSVMI GQQGYRIDPSAKGIQRGTDFSIGNEVLAGSGFSSRLMGKVRKELGYTYGIYGSMTPMQAPGPYTIRFSTRNEKADEAIAA TLQTVNDTLKQGITAQEFKLTQESLINSYPMGFASNAGINGMLGVLNFNKLPDSYITDYINRVEGARIDQVNTALRDTLT PDKFIIVTVGKPDIAKKSQLQKLK
Sequences:
>Translated_504_residues MKAHVPPFLSVKPALLTTALLATFTMGAAFAQAATEMPSGEHASADVDITQPIKAIDKLESLKNEQKLSLSIPKFQHFTT SNGVPVIFVQTKQLPIVDVDLRFNAGSARDESIRKQGFGLASMVADLLTKGTRDLDETAFAEATEQLGIELSSAAYKDQF VVNLRSLSDAEHLDPALSLMSSIITQPRFDAQVLERSKAQQVLALKQMMQNPSYLASTTFSQTLYGSHPYAHSPYGTQQS IPALTRNDLQKFHDTYFVAQNATLSLTGDLSLSQAKQAAEAITQALPQGKPAPKLPNPTPIKQSKWVHVDYDSDQTSVMI GQQGYRIDPSAKGIQRGTDFSIGNEVLAGSGFSSRLMGKVRKELGYTYGIYGSMTPMQAPGPYTIRFSTRNEKADEAIAA TLQTVNDTLKQGITAQEFKLTQESLINSYPMGFASNAGINGMLGVLNFNKLPDSYITDYINRVEGARIDQVNTALRDTLT PDKFIIVTVGKPDIAKKSQLQKLK >Mature_504_residues MKAHVPPFLSVKPALLTTALLATFTMGAAFAQAATEMPSGEHASADVDITQPIKAIDKLESLKNEQKLSLSIPKFQHFTT SNGVPVIFVQTKQLPIVDVDLRFNAGSARDESIRKQGFGLASMVADLLTKGTRDLDETAFAEATEQLGIELSSAAYKDQF VVNLRSLSDAEHLDPALSLMSSIITQPRFDAQVLERSKAQQVLALKQMMQNPSYLASTTFSQTLYGSHPYAHSPYGTQQS IPALTRNDLQKFHDTYFVAQNATLSLTGDLSLSQAKQAAEAITQALPQGKPAPKLPNPTPIKQSKWVHVDYDSDQTSVMI GQQGYRIDPSAKGIQRGTDFSIGNEVLAGSGFSSRLMGKVRKELGYTYGIYGSMTPMQAPGPYTIRFSTRNEKADEAIAA TLQTVNDTLKQGITAQEFKLTQESLINSYPMGFASNAGINGMLGVLNFNKLPDSYITDYINRVEGARIDQVNTALRDTLT PDKFIIVTVGKPDIAKKSQLQKLK
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 54936; Mature: 54936
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAHVPPFLSVKPALLTTALLATFTMGAAFAQAATEMPSGEHASADVDITQPIKAIDKLE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH SLKNEQKLSLSIPKFQHFTTSNGVPVIFVQTKQLPIVDVDLRFNAGSARDESIRKQGFGL HHCCCCEEEEECCCHHCEECCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHCCCH ASMVADLLTKGTRDLDETAFAEATEQLGIELSSAAYKDQFVVNLRSLSDAEHLDPALSLM HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHEEEHHHCCCHHHCCHHHHHH SSIITQPRFDAQVLERSKAQQVLALKQMMQNPSYLASTTFSQTLYGSHPYAHSPYGTQQS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC IPALTRNDLQKFHDTYFVAQNATLSLTGDLSLSQAKQAAEAITQALPQGKPAPKLPNPTP CCHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC IKQSKWVHVDYDSDQTSVMIGQQGYRIDPSAKGIQRGTDFSIGNEVLAGSGFSSRLMGKV CCCCCEEEEEECCCCCEEEECCCCCEECCCCCHHCCCCCCCCCCHHEECCCHHHHHHHHH RKELGYTYGIYGSMTPMQAPGPYTIRFSTRNEKADEAIAATLQTVNDTLKQGITAQEFKL HHHHCCEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH TQESLINSYPMGFASNAGINGMLGVLNFNKLPDSYITDYINRVEGARIDQVNTALRDTLT HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC PDKFIIVTVGKPDIAKKSQLQKLK CCCEEEEECCCCCCHHHHHHHHCC >Mature Secondary Structure MKAHVPPFLSVKPALLTTALLATFTMGAAFAQAATEMPSGEHASADVDITQPIKAIDKLE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH SLKNEQKLSLSIPKFQHFTTSNGVPVIFVQTKQLPIVDVDLRFNAGSARDESIRKQGFGL HHCCCCEEEEECCCHHCEECCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHCCCH ASMVADLLTKGTRDLDETAFAEATEQLGIELSSAAYKDQFVVNLRSLSDAEHLDPALSLM HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHEEEHHHCCCHHHCCHHHHHH SSIITQPRFDAQVLERSKAQQVLALKQMMQNPSYLASTTFSQTLYGSHPYAHSPYGTQQS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC IPALTRNDLQKFHDTYFVAQNATLSLTGDLSLSQAKQAAEAITQALPQGKPAPKLPNPTP CCHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC IKQSKWVHVDYDSDQTSVMIGQQGYRIDPSAKGIQRGTDFSIGNEVLAGSGFSSRLMGKV CCCCCEEEEEECCCCCEEEECCCCCEECCCCCHHCCCCCCCCCCHHEECCCHHHHHHHHH RKELGYTYGIYGSMTPMQAPGPYTIRFSTRNEKADEAIAATLQTVNDTLKQGITAQEFKL HHHHCCEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH TQESLINSYPMGFASNAGINGMLGVLNFNKLPDSYITDYINRVEGARIDQVNTALRDTLT HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC PDKFIIVTVGKPDIAKKSQLQKLK CCCEEEEECCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]