| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is pqqL [C]
Identifier: 148653579
GI number: 148653579
Start: 2208729
End: 2210321
Strand: Direct
Name: pqqL [C]
Synonym: PsycPRwf_1782
Alternate gene names: 148653579
Gene position: 2208729-2210321 (Clockwise)
Preceding gene: 148653573
Following gene: 148653580
Centisome position: 74.14
GC content: 47.52
Gene sequence:
>1593_bases ATGAAAACTGATTTTTTAACCCATTGCCCAGCAACCGGCCATCACACTTCATCAAATTCACACCCAACCCTTGCCTCATT ACCCCAAGCCTCACCTCATGCGGGTATCAAGCGCCTCAAGCTGAGCGTATTGGCGGCAATGACCGTCACAGCGCTGGCCG CTTGCAGTAGCTTACCGGCAGCCCAAAGTGACACAGATAACAAGGCTGCCCGTCCCGCTGTATCCTCAGCGGACACACAC TTTGCTGATGATGATAGCCGTCATGAATATCAACTAGATAATGGGTTAAAAGTCATCATTAAAGAGGACCACAGAGCGCC GGTTGCCATGACTCAAATTTGGTATGGTGTGGGGTCAACCGATGAGCCTAAGGACAAAGGCGGTATCTCACATCTGCTTG AACACATGATGTTTAAAGGTACCAAAAAAGTCTCAGGTGCCGACTTTGATCGCTTAATTGCCAAGTTTGGCGGCGATCAT AATGCCTTTACCAGCTATGACTACACCGGCTACTATGAGATGTTTCCAGTAAATCGCCTTGATTTGGCATTAGAGCTTGA GTCTGATCGTATGGTGAATCTGCGCTTTGACAGTGATGAATTTGTCCAAGAATTTGCCCAAGAGCGCAACGTGGTGATGG AGGAGCGCCGCCAACGTACCGATGACAATCCTTTGGCGCGCGCCTTTGAAAAGTTTCGCAAAATGGCCCTGCCTGATAGC CCCAAAGGCGAGTCCGTCATTGGCCCGATGGATGAGATTGCCAATACCGATATCAAAGACTTACAACAGTGGTATGACAC CTGGTATGCCCCAAACAACGCCACCTTGGTTATCGTGGGTGATGTCAATCCTAAAGAGACCCTAAAAAAAGTTGAGCATT ATTTTGGGTCGATCAAGCACAAACCCATTCCTCAGCGTCCCTCAGTACAGCAGCAAGCTTTTCGCGGATATCAGCAGCAG ACTGTAAAAGAAACGGTCAATGTTCCCACCTTAATTATGGCATTTAATGTGCCCACTCTGCCCAGCGCCATAACCGCTAA CAGCTCTGATAAAGAGGTCTATGAGCTGTTAATGCTGCAATATATTATGGATGGCGGCTATGCTGCACGCTTCGAAAAAA ACTTAGTGCGCAAGCAAGGTTTACTGGCCTCAGTGGTGGCTTATTATGATGCTTATGAACGGGGTGATGGGCTGTTTATG GTGCAAGCCACTCCTCGTGAGGGAGTAAGCTTGGCTCAAGCACAAAAAGCAATTATAGATGAGATGGATACATTAAAAAC CCAGACCATCAGCAAGCAAGAGCTTGAGCGGGCACGCAACAACGCAATAAATGGCTTTGTGTTCTCGCAAGACAGTATGG CCGGTCAAGCCAATATGATAGGCAGCTTACAAGTACGCGGTTTGGATGATCGTTTGGTCACCACTTTACCTGATAAGTTG GCCAAAGTAACCAGCGCAGATGTCAATGCAGCTGCAAGCAAATATTTAGTTAATAATAACTTAAATGTGATGTATGTAGA GCCTGCTGAGACACGTAGCGTCATGCCTGCCTCTAATTCTATGCCAGCTCAGCCCATGCCAGCTAAACCATAA
Upstream 100 bases:
>100_bases GCTATAATAATTAAAATCAACCCCATACTAATGATTTTATTGCTCTATTGAACAGCCTATAGGTTATAACACCTTTTTAA ACCGATAACTTGAGGACTGC
Downstream 100 bases:
>100_bases AACCGCTAATTATGCGCCAATAAACGCCAGACCAATTGCCATTGACCACCAATAAAACACCCTTTTTAAAAATATAAAAC CTAATTACGGATTTTGTTAT
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MKTDFLTHCPATGHHTSSNSHPTLASLPQASPHAGIKRLKLSVLAAMTVTALAACSSLPAAQSDTDNKAARPAVSSADTH FADDDSRHEYQLDNGLKVIIKEDHRAPVAMTQIWYGVGSTDEPKDKGGISHLLEHMMFKGTKKVSGADFDRLIAKFGGDH NAFTSYDYTGYYEMFPVNRLDLALELESDRMVNLRFDSDEFVQEFAQERNVVMEERRQRTDDNPLARAFEKFRKMALPDS PKGESVIGPMDEIANTDIKDLQQWYDTWYAPNNATLVIVGDVNPKETLKKVEHYFGSIKHKPIPQRPSVQQQAFRGYQQQ TVKETVNVPTLIMAFNVPTLPSAITANSSDKEVYELLMLQYIMDGGYAARFEKNLVRKQGLLASVVAYYDAYERGDGLFM VQATPREGVSLAQAQKAIIDEMDTLKTQTISKQELERARNNAINGFVFSQDSMAGQANMIGSLQVRGLDDRLVTTLPDKL AKVTSADVNAAASKYLVNNNLNVMYVEPAETRSVMPASNSMPAQPMPAKP
Sequences:
>Translated_530_residues MKTDFLTHCPATGHHTSSNSHPTLASLPQASPHAGIKRLKLSVLAAMTVTALAACSSLPAAQSDTDNKAARPAVSSADTH FADDDSRHEYQLDNGLKVIIKEDHRAPVAMTQIWYGVGSTDEPKDKGGISHLLEHMMFKGTKKVSGADFDRLIAKFGGDH NAFTSYDYTGYYEMFPVNRLDLALELESDRMVNLRFDSDEFVQEFAQERNVVMEERRQRTDDNPLARAFEKFRKMALPDS PKGESVIGPMDEIANTDIKDLQQWYDTWYAPNNATLVIVGDVNPKETLKKVEHYFGSIKHKPIPQRPSVQQQAFRGYQQQ TVKETVNVPTLIMAFNVPTLPSAITANSSDKEVYELLMLQYIMDGGYAARFEKNLVRKQGLLASVVAYYDAYERGDGLFM VQATPREGVSLAQAQKAIIDEMDTLKTQTISKQELERARNNAINGFVFSQDSMAGQANMIGSLQVRGLDDRLVTTLPDKL AKVTSADVNAAASKYLVNNNLNVMYVEPAETRSVMPASNSMPAQPMPAKP >Mature_530_residues MKTDFLTHCPATGHHTSSNSHPTLASLPQASPHAGIKRLKLSVLAAMTVTALAACSSLPAAQSDTDNKAARPAVSSADTH FADDDSRHEYQLDNGLKVIIKEDHRAPVAMTQIWYGVGSTDEPKDKGGISHLLEHMMFKGTKKVSGADFDRLIAKFGGDH NAFTSYDYTGYYEMFPVNRLDLALELESDRMVNLRFDSDEFVQEFAQERNVVMEERRQRTDDNPLARAFEKFRKMALPDS PKGESVIGPMDEIANTDIKDLQQWYDTWYAPNNATLVIVGDVNPKETLKKVEHYFGSIKHKPIPQRPSVQQQAFRGYQQQ TVKETVNVPTLIMAFNVPTLPSAITANSSDKEVYELLMLQYIMDGGYAARFEKNLVRKQGLLASVVAYYDAYERGDGLFM VQATPREGVSLAQAQKAIIDEMDTLKTQTISKQELERARNNAINGFVFSQDSMAGQANMIGSLQVRGLDDRLVTTLPDKL AKVTSADVNAAASKYLVNNNLNVMYVEPAETRSVMPASNSMPAQPMPAKP
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=434, Percent_Identity=25.3456221198157, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI46593007, Length=207, Percent_Identity=27.536231884058, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI155969707, Length=310, Percent_Identity=24.1935483870968, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1787770, Length=208, Percent_Identity=34.1346153846154, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI2367164, Length=379, Percent_Identity=24.802110817942, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71999683, Length=209, Percent_Identity=28.2296650717703, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17553678, Length=294, Percent_Identity=25.8503401360544, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71994338, Length=225, Percent_Identity=28.4444444444444, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI25146563, Length=225, Percent_Identity=28.4444444444444, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25146566, Length=225, Percent_Identity=28.4444444444444, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI32566665, Length=225, Percent_Identity=28.4444444444444, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115533970, Length=223, Percent_Identity=29.1479820627803, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI72001443, Length=236, Percent_Identity=26.6949152542373, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323192, Length=216, Percent_Identity=25.462962962963, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI21357875, Length=214, Percent_Identity=29.4392523364486, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24646943, Length=214, Percent_Identity=29.4392523364486, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI221513245, Length=272, Percent_Identity=25.7352941176471, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 58796; Mature: 58796
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTDFLTHCPATGHHTSSNSHPTLASLPQASPHAGIKRLKLSVLAAMTVTALAACSSLPA CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC AQSDTDNKAARPAVSSADTHFADDDSRHEYQLDNGLKVIIKEDHRAPVAMTQIWYGVGST CCCCCCCHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCEEHHHHHHCCCCC DEPKDKGGISHLLEHMMFKGTKKVSGADFDRLIAKFGGDHNAFTSYDYTGYYEMFPVNRL CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCE DLALELESDRMVNLRFDSDEFVQEFAQERNVVMEERRQRTDDNPLARAFEKFRKMALPDS EEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC PKGESVIGPMDEIANTDIKDLQQWYDTWYAPNNATLVIVGDVNPKETLKKVEHYFGSIKH CCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCC KPIPQRPSVQQQAFRGYQQQTVKETVNVPTLIMAFNVPTLPSAITANSSDKEVYELLMLQ CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCCHHHHHHHHHHH YIMDGGYAARFEKNLVRKQGLLASVVAYYDAYERGDGLFMVQATPREGVSLAQAQKAIID HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH EMDTLKTQTISKQELERARNNAINGFVFSQDSMAGQANMIGSLQVRGLDDRLVTTLPDKL HHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCHHCCEEEEEECCCCHHHHHHHHHH AKVTSADVNAAASKYLVNNNLNVMYVEPAETRSVMPASNSMPAQPMPAKP HHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTDFLTHCPATGHHTSSNSHPTLASLPQASPHAGIKRLKLSVLAAMTVTALAACSSLPA CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC AQSDTDNKAARPAVSSADTHFADDDSRHEYQLDNGLKVIIKEDHRAPVAMTQIWYGVGST CCCCCCCHHHCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCEEHHHHHHCCCCC DEPKDKGGISHLLEHMMFKGTKKVSGADFDRLIAKFGGDHNAFTSYDYTGYYEMFPVNRL CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCE DLALELESDRMVNLRFDSDEFVQEFAQERNVVMEERRQRTDDNPLARAFEKFRKMALPDS EEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC PKGESVIGPMDEIANTDIKDLQQWYDTWYAPNNATLVIVGDVNPKETLKKVEHYFGSIKH CCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCC KPIPQRPSVQQQAFRGYQQQTVKETVNVPTLIMAFNVPTLPSAITANSSDKEVYELLMLQ CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCCCCHHHHHHHHHHH YIMDGGYAARFEKNLVRKQGLLASVVAYYDAYERGDGLFMVQATPREGVSLAQAQKAIID HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHH EMDTLKTQTISKQELERARNNAINGFVFSQDSMAGQANMIGSLQVRGLDDRLVTTLPDKL HHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCHHCCEEEEEECCCCHHHHHHHHHH AKVTSADVNAAASKYLVNNNLNVMYVEPAETRSVMPASNSMPAQPMPAKP HHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]