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The map label for this gene is yfiO [C]

Identifier: 148653371

GI number: 148653371

Start: 1931164

End: 1932345

Strand: Direct

Name: yfiO [C]

Synonym: PsycPRwf_1573

Alternate gene names: 148653371

Gene position: 1931164-1932345 (Clockwise)

Preceding gene: 148653367

Following gene: 148653372

Centisome position: 64.83

GC content: 47.46

Gene sequence:

>1182_bases
ATGCAGCGTGCTTCAACTCCTTTTTTTACGGCATCAAATCAAAAACCATCTCACTCACCTGCCAAAAACAAACTGGCTTT
TGCCGTGCTGACAGCAGGCCTATTAAGCTTAACTGGCTGTCAGACACTAAAGAATATCACCGGCAAAGACAGTGACACAG
TGGCCACCGCAGAGAAGACTGATGCACAGTACTACCAAGAAGCTGTAAAAGCTATGGACAAAGGCCGTTACATTTATGCC
TCTGAACAGCTCACTGAACTTCGCACCTTCTATCCGACAGGCGCTTATGCTGAGCAGGCTTTACTTGACTTGATGTACAG
CCAATTCCAGACTAAAGATTATGAGCTTGCTGCCACCAGTGCTGAGCAGTTTATCAAACTCTATCCACGCAACCCTCAGG
TTGATTATGCTTACTATGTGCGCGGTGTGGCCAACATGCATGCCGGTACCAGCAGCCTCTTGAGCATTGCTCGTATGCAA
CAAGCGGACCGTGATACCTCTTATTATCGTTTGGCATTTAGCAACTTCCAAGATCTTTTATCGCGCTTTCCAAACAGCAG
CTATGCCCCAGACGCCGCTCAGCGCATGACATATATCTATAATCAGTTTGCAGAAAGTGAGCTGAGCGCTGCACGTTGGT
ACATCAAGCGTGAAGCTTATGTCGCTGCAGCCAACCGTGCCAAATGGGTATTCCAGTACTATCCTTTAAGCCAACAAATC
CCTGAGTCTATCGCTATTTTGGCGTACAGTAATGAGCAGTTGGGCTTAACTGACCTTGCCAATCAGTACAAAACCCTATT
ACAAATTAACTATCCTGAGTGGCTGACCCGTGATGGTGGCGTGCGTATTAACAGCAACCGCACTGCCAGCTTATTAAACA
AAATCACTTATGGTAAATTAGGCCGATCTAATAATGGCGATGATAGCACTGCAGCTACAGGTGAGTACACAGGTCCTACT
AAGCAGCAGGTTATCCAGCAAGCTGCGCAAATGCAATTGCCTAGCGATAATGCGGCAACTTCGCAAGCTGACTTACCAAC
CATTAATAGCAATCGCCGCGGTGTCAACTTAGGCCTTGGCCTGCCAGATGATGCAAGTGCACAGCCTGTTCCAAGCCCGC
AGCCACAAACTCGCATTACAAGCCCAAGCCAGATGTACCCTGAACAAATGGATCCACAATAA

Upstream 100 bases:

>100_bases
ATTATCGTTGTAATCACTAACAATCCTATACCAAAATATGATTGTAGCGTGCTACACTAGGGCGACTAAAATTTGACTAA
AATATTCTGCGGAGATTTCC

Downstream 100 bases:

>100_bases
GCCATCGATACCTTTTAGATATCAACCTATAAATGATTATAGTATAAATACTAAAAGGTCGGCGATGTAGAGTTGGCCCT
GACCCCTGACCCTATCTAGG

Product: DNA uptake lipoprotein-like protein

Products: NA

Alternate protein names: ORFY [H]

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MQRASTPFFTASNQKPSHSPAKNKLAFAVLTAGLLSLTGCQTLKNITGKDSDTVATAEKTDAQYYQEAVKAMDKGRYIYA
SEQLTELRTFYPTGAYAEQALLDLMYSQFQTKDYELAATSAEQFIKLYPRNPQVDYAYYVRGVANMHAGTSSLLSIARMQ
QADRDTSYYRLAFSNFQDLLSRFPNSSYAPDAAQRMTYIYNQFAESELSAARWYIKREAYVAAANRAKWVFQYYPLSQQI
PESIAILAYSNEQLGLTDLANQYKTLLQINYPEWLTRDGGVRINSNRTASLLNKITYGKLGRSNNGDDSTAATGEYTGPT
KQQVIQQAAQMQLPSDNAATSQADLPTINSNRRGVNLGLGLPDDASAQPVPSPQPQTRITSPSQMYPEQMDPQ

Sequences:

>Translated_393_residues
MQRASTPFFTASNQKPSHSPAKNKLAFAVLTAGLLSLTGCQTLKNITGKDSDTVATAEKTDAQYYQEAVKAMDKGRYIYA
SEQLTELRTFYPTGAYAEQALLDLMYSQFQTKDYELAATSAEQFIKLYPRNPQVDYAYYVRGVANMHAGTSSLLSIARMQ
QADRDTSYYRLAFSNFQDLLSRFPNSSYAPDAAQRMTYIYNQFAESELSAARWYIKREAYVAAANRAKWVFQYYPLSQQI
PESIAILAYSNEQLGLTDLANQYKTLLQINYPEWLTRDGGVRINSNRTASLLNKITYGKLGRSNNGDDSTAATGEYTGPT
KQQVIQQAAQMQLPSDNAATSQADLPTINSNRRGVNLGLGLPDDASAQPVPSPQPQTRITSPSQMYPEQMDPQ
>Mature_393_residues
MQRASTPFFTASNQKPSHSPAKNKLAFAVLTAGLLSLTGCQTLKNITGKDSDTVATAEKTDAQYYQEAVKAMDKGRYIYA
SEQLTELRTFYPTGAYAEQALLDLMYSQFQTKDYELAATSAEQFIKLYPRNPQVDYAYYVRGVANMHAGTSSLLSIARMQ
QADRDTSYYRLAFSNFQDLLSRFPNSSYAPDAAQRMTYIYNQFAESELSAARWYIKREAYVAAANRAKWVFQYYPLSQQI
PESIAILAYSNEQLGLTDLANQYKTLLQINYPEWLTRDGGVRINSNRTASLLNKITYGKLGRSNNGDDSTAATGEYTGPT
KQQVIQQAAQMQLPSDNAATSQADLPTINSNRRGVNLGLGLPDDASAQPVPSPQPQTRITSPSQMYPEQMDPQ

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=208, Percent_Identity=31.7307692307692, Blast_Score=126, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43783; Mature: 43783

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRASTPFFTASNQKPSHSPAKNKLAFAVLTAGLLSLTGCQTLKNITGKDSDTVATAEKT
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHH
DAQYYQEAVKAMDKGRYIYASEQLTELRTFYPTGAYAEQALLDLMYSQFQTKDYELAATS
HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEHHC
AEQFIKLYPRNPQVDYAYYVRGVANMHAGTSSLLSIARMQQADRDTSYYRLAFSNFQDLL
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
SRFPNSSYAPDAAQRMTYIYNQFAESELSAARWYIKREAYVAAANRAKWVFQYYPLSQQI
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHC
PESIAILAYSNEQLGLTDLANQYKTLLQINYPEWLTRDGGVRINSNRTASLLNKITYGKL
CCCEEEEEECCCCCCHHHHHHHHHHHEEECCCHHHCCCCCEEECCCCHHHHHHHHHHHCC
GRSNNGDDSTAATGEYTGPTKQQVIQQAAQMQLPSDNAATSQADLPTINSNRRGVNLGLG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC
LPDDASAQPVPSPQPQTRITSPSQMYPEQMDPQ
CCCCCCCCCCCCCCCCCCCCCCHHHCCHHCCCC
>Mature Secondary Structure
MQRASTPFFTASNQKPSHSPAKNKLAFAVLTAGLLSLTGCQTLKNITGKDSDTVATAEKT
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHH
DAQYYQEAVKAMDKGRYIYASEQLTELRTFYPTGAYAEQALLDLMYSQFQTKDYELAATS
HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEHHC
AEQFIKLYPRNPQVDYAYYVRGVANMHAGTSSLLSIARMQQADRDTSYYRLAFSNFQDLL
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
SRFPNSSYAPDAAQRMTYIYNQFAESELSAARWYIKREAYVAAANRAKWVFQYYPLSQQI
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHC
PESIAILAYSNEQLGLTDLANQYKTLLQINYPEWLTRDGGVRINSNRTASLLNKITYGKL
CCCEEEEEECCCCCCHHHHHHHHHHHEEECCCHHHCCCCCEEECCCCHHHHHHHHHHHCC
GRSNNGDDSTAATGEYTGPTKQQVIQQAAQMQLPSDNAATSQADLPTINSNRRGVNLGLG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC
LPDDASAQPVPSPQPQTRITSPSQMYPEQMDPQ
CCCCCCCCCCCCCCCCCCCCCCHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8097014; 10984043 [H]