| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653338
Identifier: 148653338
GI number: 148653338
Start: 1885336
End: 1885998
Strand: Direct
Name: 148653338
Synonym: PsycPRwf_1540
Alternate gene names: NA
Gene position: 1885336-1885998 (Clockwise)
Preceding gene: 148653335
Following gene: 148653339
Centisome position: 63.29
GC content: 44.65
Gene sequence:
>663_bases ATGGCTCTCTACCCTTACACGCTGCAACCTGTTGACATTAATTTGACTGAAGATGAATTTCAACAAGCACAATTTGAGTT GTTTGAAAAAAGTAATCCCTCATTTGGCCTAAATAGCATCAAACTCAAAGAGTGGATTGTGATGGCACTGGTGGTCATCG CAGCCGTTGCCGGCTTGGTTTTTGTGAAAGGCTACTCAACATTTATCTTCTATCTGATGTTAGTACTGGTCGTGGTATAT CTACTGGTGCGCACTGTCGGTATGAAATGGTATGTCAAACGCGAGTTTGAAAAACAAATGGCCGAACAAGAAATGCCAGA GGAAATGAAGCAGTTAAAATTGGGCGTGCAAAAACACGGTCTGGTTATGGCAATGCCAGCACCTAATGCCGGTATTCAGC CCAATATGTCAAAGGCAATGCGCGGCATGCAAATGCGTGCAGCATCCACTCAGCAAGCTGTCATTCCTTGGAGTGCTGTC AAGAGCTGGGAGGAGACGGATGATTATATCTTTATGTTATTTGAAATGCAGGGGCAGCAAGGCAGTCAGATTATCCCAAA ACGTCTGCAAGCACAAAAGTTCCCGATTGACACTGTGCGCACGCACCTACTAGAAGTAATTCCTCAAAAAGGGTTAAATC CTGTGGCTTTAGGTCAGCAGTAG
Upstream 100 bases:
>100_bases AAGATAGCAGGGTATCTATGACAGCTAGGCTTTGGTCTAAAAAAAGTCATACTCCTTTTATTATTATTTTGCCCAATTAA CATCCTATTCGAGTAATTAT
Downstream 100 bases:
>100_bases CAACAGCAGATAACATCTATTATCGTTAATCATAGCTAAATTAGCCTCTATTGGTCATGGACTAATTAATGCCTTAAGGC GGCCTTCTGGCTGCCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MALYPYTLQPVDINLTEDEFQQAQFELFEKSNPSFGLNSIKLKEWIVMALVVIAAVAGLVFVKGYSTFIFYLMLVLVVVY LLVRTVGMKWYVKREFEKQMAEQEMPEEMKQLKLGVQKHGLVMAMPAPNAGIQPNMSKAMRGMQMRAASTQQAVIPWSAV KSWEETDDYIFMLFEMQGQQGSQIIPKRLQAQKFPIDTVRTHLLEVIPQKGLNPVALGQQ
Sequences:
>Translated_220_residues MALYPYTLQPVDINLTEDEFQQAQFELFEKSNPSFGLNSIKLKEWIVMALVVIAAVAGLVFVKGYSTFIFYLMLVLVVVY LLVRTVGMKWYVKREFEKQMAEQEMPEEMKQLKLGVQKHGLVMAMPAPNAGIQPNMSKAMRGMQMRAASTQQAVIPWSAV KSWEETDDYIFMLFEMQGQQGSQIIPKRLQAQKFPIDTVRTHLLEVIPQKGLNPVALGQQ >Mature_219_residues ALYPYTLQPVDINLTEDEFQQAQFELFEKSNPSFGLNSIKLKEWIVMALVVIAAVAGLVFVKGYSTFIFYLMLVLVVVYL LVRTVGMKWYVKREFEKQMAEQEMPEEMKQLKLGVQKHGLVMAMPAPNAGIQPNMSKAMRGMQMRAASTQQAVIPWSAVK SWEETDDYIFMLFEMQGQQGSQIIPKRLQAQKFPIDTVRTHLLEVIPQKGLNPVALGQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25094; Mature: 24963
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALYPYTLQPVDINLTEDEFQQAQFELFEKSNPSFGLNSIKLKEWIVMALVVIAAVAGLV CCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FVKGYSTFIFYLMLVLVVVYLLVRTVGMKWYVKREFEKQMAEQEMPEEMKQLKLGVQKHG HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LVMAMPAPNAGIQPNMSKAMRGMQMRAASTQQAVIPWSAVKSWEETDDYIFMLFEMQGQQ EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCC GSQIIPKRLQAQKFPIDTVRTHLLEVIPQKGLNPVALGQQ CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ALYPYTLQPVDINLTEDEFQQAQFELFEKSNPSFGLNSIKLKEWIVMALVVIAAVAGLV CCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FVKGYSTFIFYLMLVLVVVYLLVRTVGMKWYVKREFEKQMAEQEMPEEMKQLKLGVQKHG HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LVMAMPAPNAGIQPNMSKAMRGMQMRAASTQQAVIPWSAVKSWEETDDYIFMLFEMQGQQ EEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCC GSQIIPKRLQAQKFPIDTVRTHLLEVIPQKGLNPVALGQQ CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA