| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is dps [C]
Identifier: 148653339
GI number: 148653339
Start: 1886498
End: 1886968
Strand: Direct
Name: dps [C]
Synonym: PsycPRwf_1541
Alternate gene names: 148653339
Gene position: 1886498-1886968 (Clockwise)
Preceding gene: 148653338
Following gene: 148653341
Centisome position: 63.33
GC content: 41.19
Gene sequence:
>471_bases ATGACTACCAATCAAATCGGCCTAGAAAAAAAAGACATGTCAGCTGTCATCGATAAACTAAACAATCTATTGTCAAGCTA CCATGTATTTTATATTAATGTGCGTGGCTACCACTGGAACGTAAAAGGCGAGCACTTCTTCTCACTACATCAAAAATTTG AAGAGCTATATACCAGCTTACAACTTCAAATCGACGAAATCGCTGAACGTGTATTAACTCTAGGCGGTACGCCACTACAT GCCTATAGCGACTTTGCTCAGCACAGCAGCATCAAAGAGCACAAAAACGTCTTTAACGGCAAAGAATGCGTTAAAGGTCT GGTAAGTGGTTTACAAGAGCTTATTGAAGAGCAGCGCCAAGTATCTGCAGTAGCAGAAGAAGCTGAAGACCAAGGTACCG CTGATTTAGTGGATGAGTATGTACAGCAGCAAGAAAAACTGGTTTGGATGTATAACGCTTTCTTAGGCTAA
Upstream 100 bases:
>100_bases TCGTTTATAGCAAGTCACCTCAAAGCTGAGATAGCTTAGAGCAGTCTTCCAACAATTAAAATTTAATCACTTAACACTCA CAAAAAAAAGGATAATAACT
Downstream 100 bases:
>100_bases CTCACTGTCTAGACTAAGCTAGTGTGTCACTTAGTGACAAGCCAGTTTTACTAACACCAAAATCCCCGCTCAATGAGCGG GGATTTTTGTTATCTAATGA
Product: Dps family ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTTNQIGLEKKDMSAVIDKLNNLLSSYHVFYINVRGYHWNVKGEHFFSLHQKFEELYTSLQLQIDEIAERVLTLGGTPLH AYSDFAQHSSIKEHKNVFNGKECVKGLVSGLQELIEEQRQVSAVAEEAEDQGTADLVDEYVQQQEKLVWMYNAFLG
Sequences:
>Translated_156_residues MTTNQIGLEKKDMSAVIDKLNNLLSSYHVFYINVRGYHWNVKGEHFFSLHQKFEELYTSLQLQIDEIAERVLTLGGTPLH AYSDFAQHSSIKEHKNVFNGKECVKGLVSGLQELIEEQRQVSAVAEEAEDQGTADLVDEYVQQQEKLVWMYNAFLG >Mature_155_residues TTNQIGLEKKDMSAVIDKLNNLLSSYHVFYINVRGYHWNVKGEHFFSLHQKFEELYTSLQLQIDEIAERVLTLGGTPLHA YSDFAQHSSIKEHKNVFNGKECVKGLVSGLQELIEEQRQVSAVAEEAEDQGTADLVDEYVQQQEKLVWMYNAFLG
Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 17881; Mature: 17750
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNQIGLEKKDMSAVIDKLNNLLSSYHVFYINVRGYHWNVKGEHFFSLHQKFEELYTSL CCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHH QLQIDEIAERVLTLGGTPLHAYSDFAQHSSIKEHKNVFNGKECVKGLVSGLQELIEEQRQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VSAVAEEAEDQGTADLVDEYVQQQEKLVWMYNAFLG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTNQIGLEKKDMSAVIDKLNNLLSSYHVFYINVRGYHWNVKGEHFFSLHQKFEELYTSL CCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHH QLQIDEIAERVLTLGGTPLHAYSDFAQHSSIKEHKNVFNGKECVKGLVSGLQELIEEQRQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VSAVAEEAEDQGTADLVDEYVQQQEKLVWMYNAFLG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]