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The map label for this gene is 148643349

Identifier: 148643349

GI number: 148643349

Start: 1293809

End: 1294237

Strand: Reverse

Name: 148643349

Synonym: Msm_1289

Alternate gene names: NA

Gene position: 1294237-1293809 (Counterclockwise)

Preceding gene: 148643351

Following gene: 148643348

Centisome position: 69.84

GC content: 25.41

Gene sequence:

>429_bases
ATGGATAAATTAATTAATAAGTTATTTAGAAAAAGTACTGACAACATTTTCTTACAAATGTTTAGATACCTATTTGTAGG
AACTGCATCTTTTTTAATAGATTTCATTATTTATTTATCATTAATTAACTTTTTAGGACAAAATTATTTAATTTCAGCAG
CTATTGCTTTTTTTATATCAGTGCTGGCTAATTATTACATGTCTACTTCATGGGTATTTAATCAGACAGACAGAAATAAT
AAGGTTCTGGATTTCAATTTATTTATTTTAATCAGCTTTATCGGGCTTATTTTTACTGAAATATTATTATACGCATTTGT
AGACTATGGAAATATAAACTACATCTGGTCTAAAATTATAGCATCCATTATAGTAATGTTCTGGAATTTCACAGCACGTA
GAGTTATGTTTTATGGGAAAAAACTTTAA

Upstream 100 bases:

>100_bases
TCCTGGTGACTACATCACAACAAGCAGCTACAACAACACAGACACTGTAAACAAAATTAAAACTAAAACTTATTAAATAA
TTAAAATTAAGATTATAACT

Downstream 100 bases:

>100_bases
GTTGGAAATTATTATGAAAAATTTAAATAAAGAAGACAAATTAGGAAAAATACTTTTTATAATAAGCATAATTACATTGC
TTTATGTTTCCTATATTGGA

Product: GtrA-like surface polysaccharide biosynthesis protein, GtrA

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDKLINKLFRKSTDNIFLQMFRYLFVGTASFLIDFIIYLSLINFLGQNYLISAAIAFFISVLANYYMSTSWVFNQTDRNN
KVLDFNLFILISFIGLIFTEILLYAFVDYGNINYIWSKIIASIIVMFWNFTARRVMFYGKKL

Sequences:

>Translated_142_residues
MDKLINKLFRKSTDNIFLQMFRYLFVGTASFLIDFIIYLSLINFLGQNYLISAAIAFFISVLANYYMSTSWVFNQTDRNN
KVLDFNLFILISFIGLIFTEILLYAFVDYGNINYIWSKIIASIIVMFWNFTARRVMFYGKKL
>Mature_142_residues
MDKLINKLFRKSTDNIFLQMFRYLFVGTASFLIDFIIYLSLINFLGQNYLISAAIAFFISVLANYYMSTSWVFNQTDRNN
KVLDFNLFILISFIGLIFTEILLYAFVDYGNINYIWSKIIASIIVMFWNFTARRVMFYGKKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16814; Mature: 16814

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLINKLFRKSTDNIFLQMFRYLFVGTASFLIDFIIYLSLINFLGQNYLISAAIAFFIS
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VLANYYMSTSWVFNQTDRNNKVLDFNLFILISFIGLIFTEILLYAFVDYGNINYIWSKII
HHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ASIIVMFWNFTARRVMFYGKKL
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKLINKLFRKSTDNIFLQMFRYLFVGTASFLIDFIIYLSLINFLGQNYLISAAIAFFIS
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VLANYYMSTSWVFNQTDRNNKVLDFNLFILISFIGLIFTEILLYAFVDYGNINYIWSKII
HHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ASIIVMFWNFTARRVMFYGKKL
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA