| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643336
Identifier: 148643336
GI number: 148643336
Start: 1279771
End: 1280637
Strand: Reverse
Name: 148643336
Synonym: Msm_1276
Alternate gene names: NA
Gene position: 1280637-1279771 (Counterclockwise)
Preceding gene: 148643337
Following gene: 148643331
Centisome position: 69.11
GC content: 26.53
Gene sequence:
>867_bases ATGAATGAAAAGGGAAGTATTTCAACTGAAATATTGGTTGTGTTGGTTGTTATTTTATTAATAATTGGTATAACAGCTAA ATTTAGTGAAATTACATTAGATAAACTAGCTACATCAACAGAAAATGAAAATATTGAATTATTGCTTTCTCAAAGTGCAG ATAACTTAATTAATAATCCGGGAACTCCAAATTGGGAAAAATATTTAGCAGGTACCCCAGGATTAGCTATTTCAAATGAA AATGAAGCTATTATTCCAAATAGTATTTCTTATGATAAATTTTTAATTTTAGGTAAAAATTATAGAAAACTAGTTGACAA GAATCTTTTTGATTCAAAAATTAAAACTTCAATGGAAGTCATCCCTAAAGAGAGCAGTATTTCAAGTGTAAAAATTGGTT CACCAGATGACGGAAAAAACGTTTACAGTGTAAACAGAATGGTTAAATGTGATTTTTATAAAAAATACGTTGTAAAAGAT TTTCAAACAAAAGGAAAATGCAATCATAACCACAAGGATGGCTATAGCTGCAATTATTTCAAGATATATAGAAATTACTT AAGAAGCAATGATTATTATTTATTAATTGACAAAGATTCAGCAGATAACTTAAAATGGTGTATGGACAATACCAGAATAA AACTACCTGTTGTAGAAAGTGTTACAAGCAATAAAATATATTTAAATAATAGAATAAACCTAGAATTTCCAATAGTCGAT TTTAGTTCAATAATGTTTATCCATTTTAATAAAAAAGATGTCAAAGCCCTTTTAGTTTCTGTTCCAAAAGATTTTGATAA ATCAAAACTGGATTATGATTATTTTAGAACAAATAACTGTGAATTTATCCTGAAAGGGTGGTATTAA
Upstream 100 bases:
>100_bases TATTTCATGACAGATATCCAGGCCATAAAATAAATCCCGAAGATCCAACTGAACTATTTTTAGATGTTGCTCACAGAACT AAATATGGAGTATTAGTATA
Downstream 100 bases:
>100_bases ATAAAAATAACTGCAGTAATAATTAATGACACAGAAATAAGTATTAAACTGGATATTGCATCTGTAATACTTGTTGAAAT TGGAATTAAAATATTATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNEKGSISTEILVVLVVILLIIGITAKFSEITLDKLATSTENENIELLLSQSADNLINNPGTPNWEKYLAGTPGLAISNE NEAIIPNSISYDKFLILGKNYRKLVDKNLFDSKIKTSMEVIPKESSISSVKIGSPDDGKNVYSVNRMVKCDFYKKYVVKD FQTKGKCNHNHKDGYSCNYFKIYRNYLRSNDYYLLIDKDSADNLKWCMDNTRIKLPVVESVTSNKIYLNNRINLEFPIVD FSSIMFIHFNKKDVKALLVSVPKDFDKSKLDYDYFRTNNCEFILKGWY
Sequences:
>Translated_288_residues MNEKGSISTEILVVLVVILLIIGITAKFSEITLDKLATSTENENIELLLSQSADNLINNPGTPNWEKYLAGTPGLAISNE NEAIIPNSISYDKFLILGKNYRKLVDKNLFDSKIKTSMEVIPKESSISSVKIGSPDDGKNVYSVNRMVKCDFYKKYVVKD FQTKGKCNHNHKDGYSCNYFKIYRNYLRSNDYYLLIDKDSADNLKWCMDNTRIKLPVVESVTSNKIYLNNRINLEFPIVD FSSIMFIHFNKKDVKALLVSVPKDFDKSKLDYDYFRTNNCEFILKGWY >Mature_288_residues MNEKGSISTEILVVLVVILLIIGITAKFSEITLDKLATSTENENIELLLSQSADNLINNPGTPNWEKYLAGTPGLAISNE NEAIIPNSISYDKFLILGKNYRKLVDKNLFDSKIKTSMEVIPKESSISSVKIGSPDDGKNVYSVNRMVKCDFYKKYVVKD FQTKGKCNHNHKDGYSCNYFKIYRNYLRSNDYYLLIDKDSADNLKWCMDNTRIKLPVVESVTSNKIYLNNRINLEFPIVD FSSIMFIHFNKKDVKALLVSVPKDFDKSKLDYDYFRTNNCEFILKGWY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33096; Mature: 33096
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKGSISTEILVVLVVILLIIGITAKFSEITLDKLATSTENENIELLLSQSADNLINNP CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCC GTPNWEKYLAGTPGLAISNENEAIIPNSISYDKFLILGKNYRKLVDKNLFDSKIKTSMEV CCCCHHHHHCCCCCEEECCCCCEECCCCCCCCEEEEECCHHHHHHHCHHHHHHHHHHHHC IPKESSISSVKIGSPDDGKNVYSVNRMVKCDFYKKYVVKDFQTKGKCNHNHKDGYSCNYF CCCCCCCCEEECCCCCCCCCEEEECEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH KIYRNYLRSNDYYLLIDKDSADNLKWCMDNTRIKLPVVESVTSNKIYLNNRINLEFPIVD HHHHHHHCCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCCEEEECCEEEEEEEEEE FSSIMFIHFNKKDVKALLVSVPKDFDKSKLDYDYFRTNNCEFILKGWY CCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCHHEECCCCEEEEECCC >Mature Secondary Structure MNEKGSISTEILVVLVVILLIIGITAKFSEITLDKLATSTENENIELLLSQSADNLINNP CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHCCC GTPNWEKYLAGTPGLAISNENEAIIPNSISYDKFLILGKNYRKLVDKNLFDSKIKTSMEV CCCCHHHHHCCCCCEEECCCCCEECCCCCCCCEEEEECCHHHHHHHCHHHHHHHHHHHHC IPKESSISSVKIGSPDDGKNVYSVNRMVKCDFYKKYVVKDFQTKGKCNHNHKDGYSCNYF CCCCCCCCEEECCCCCCCCCEEEECEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH KIYRNYLRSNDYYLLIDKDSADNLKWCMDNTRIKLPVVESVTSNKIYLNNRINLEFPIVD HHHHHHHCCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCCEEEECCEEEEEEEEEE FSSIMFIHFNKKDVKALLVSVPKDFDKSKLDYDYFRTNNCEFILKGWY CCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCHHEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA