Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148643337

Identifier: 148643337

GI number: 148643337

Start: 1280637

End: 1281578

Strand: Reverse

Name: 148643337

Synonym: Msm_1277

Alternate gene names: NA

Gene position: 1281578-1280637 (Counterclockwise)

Preceding gene: 148643345

Following gene: 148643336

Centisome position: 69.16

GC content: 31.32

Gene sequence:

>942_bases
ATGAAATATTTAAAAATAGACTCTAAAGGAAATATAATAACTGGAACAACTGTGATTTTAATAGCTTCTCTAATATTAAT
TCTAATTTTTGTTTTAACAAGTATGTATACTTTAGAAAATGAAAATACTGATTCAATAGCTAATGATAATCTAAAATATA
TTGTTAATGATTATAATAGAAATTTAGAGGTTTTATCCCGTGATTCAATAGCTGAAGTTACAGAAGAAGTTTACCACGGG
AAATATATTTTCAGTTCTGAAAGAGAAATTAAAAAAGTCTTAAATAAAAAATTAGATGATAAAAACAAGGAATATGAAAA
AAAATACGGTGTTTCAATATCTTCTAATGTCCTATCCATCAAAAACACAGATGACCCCATTAATCTAGAAGTTACAACTC
ATTTAAAGATTTCAAAAAATAAGGACAGATTTTCAGGTAATTTAAAAAGCATAACCTCTGTTGAAGGCTTAAAAGACCCC
CTACCTTATGCCATTTTAACTCCATATAGCGGAATTTGGCATGACGATAAAAAAATCCATTATGGAACTACTTTAACCAC
CTATTTAACTGCACATGGCATCGATAAGCCAGAAGGTTATTTAGGTGCAACTAGTCCTTTAATAATAAAAAAATGCCCAT
ATGACCCTTATATTCACCATGGTGACGGAGATACCCTGCAAAACTGCTTAAAAAATGGTTATTTTCATGAAAGTGCTGAC
GGCAGCTGTTATTTATGTAGACTTGAGGGAAAAGGAATATGTCCCCACTATGGATTTGAAGTCTTTATTGTTCCGCACTG
CGTAGGTGTTGAATATTCTGTTTCCGGATCGGACCATGTCGTATTTCATGACAGATATCCAGGCCATAAAATAAATCCCG
AAGATCCAACTGAACTATTTTTAGATGTTGCTCACAGAACTAAATATGGAGTATTAGTATAA

Upstream 100 bases:

>100_bases
TAGATATGTTTTATAATTCCAATTAAAAAACATATTTTCACTTTTTCACATTGGTGCACTTGAAAAAATAATTTATAAAT
TGGAAGTTAAATTTCAAGTG

Downstream 100 bases:

>100_bases
TGAATGAAAAGGGAAGTATTTCAACTGAAATATTGGTTGTGTTGGTTGTTATTTTATTAATAATTGGTATAACAGCTAAA
TTTAGTGAAATTACATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKYLKIDSKGNIITGTTVILIASLILILIFVLTSMYTLENENTDSIANDNLKYIVNDYNRNLEVLSRDSIAEVTEEVYHG
KYIFSSEREIKKVLNKKLDDKNKEYEKKYGVSISSNVLSIKNTDDPINLEVTTHLKISKNKDRFSGNLKSITSVEGLKDP
LPYAILTPYSGIWHDDKKIHYGTTLTTYLTAHGIDKPEGYLGATSPLIIKKCPYDPYIHHGDGDTLQNCLKNGYFHESAD
GSCYLCRLEGKGICPHYGFEVFIVPHCVGVEYSVSGSDHVVFHDRYPGHKINPEDPTELFLDVAHRTKYGVLV

Sequences:

>Translated_313_residues
MKYLKIDSKGNIITGTTVILIASLILILIFVLTSMYTLENENTDSIANDNLKYIVNDYNRNLEVLSRDSIAEVTEEVYHG
KYIFSSEREIKKVLNKKLDDKNKEYEKKYGVSISSNVLSIKNTDDPINLEVTTHLKISKNKDRFSGNLKSITSVEGLKDP
LPYAILTPYSGIWHDDKKIHYGTTLTTYLTAHGIDKPEGYLGATSPLIIKKCPYDPYIHHGDGDTLQNCLKNGYFHESAD
GSCYLCRLEGKGICPHYGFEVFIVPHCVGVEYSVSGSDHVVFHDRYPGHKINPEDPTELFLDVAHRTKYGVLV
>Mature_313_residues
MKYLKIDSKGNIITGTTVILIASLILILIFVLTSMYTLENENTDSIANDNLKYIVNDYNRNLEVLSRDSIAEVTEEVYHG
KYIFSSEREIKKVLNKKLDDKNKEYEKKYGVSISSNVLSIKNTDDPINLEVTTHLKISKNKDRFSGNLKSITSVEGLKDP
LPYAILTPYSGIWHDDKKIHYGTTLTTYLTAHGIDKPEGYLGATSPLIIKKCPYDPYIHHGDGDTLQNCLKNGYFHESAD
GSCYLCRLEGKGICPHYGFEVFIVPHCVGVEYSVSGSDHVVFHDRYPGHKINPEDPTELFLDVAHRTKYGVLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35317; Mature: 35317

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLKIDSKGNIITGTTVILIASLILILIFVLTSMYTLENENTDSIANDNLKYIVNDYNR
CCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEECCCC
NLEVLSRDSIAEVTEEVYHGKYIFSSEREIKKVLNKKLDDKNKEYEKKYGVSISSNVLSI
CEEEEECCHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHCCEECCCEEEE
KNTDDPINLEVTTHLKISKNKDRFSGNLKSITSVEGLKDPLPYAILTPYSGIWHDDKKIH
ECCCCCEEEEEEEEEEEECCCHHHCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEE
YGTTLTTYLTAHGIDKPEGYLGATSPLIIKKCPYDPYIHHGDGDTLQNCLKNGYFHESAD
ECCEEEEEHEECCCCCCCCCCCCCCCEEEEECCCCCCEECCCCHHHHHHHHCCCEECCCC
GSCYLCRLEGKGICPHYGFEVFIVPHCVGVEYSVSGSDHVVFHDRYPGHKINPEDPTELF
CCEEEEEECCCCCCCCCCEEEEEEEEEECEEEEECCCCEEEECCCCCCCCCCCCCHHHHH
LDVAHRTKYGVLV
HHHHHHCCCCCCC
>Mature Secondary Structure
MKYLKIDSKGNIITGTTVILIASLILILIFVLTSMYTLENENTDSIANDNLKYIVNDYNR
CCEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEEECCCC
NLEVLSRDSIAEVTEEVYHGKYIFSSEREIKKVLNKKLDDKNKEYEKKYGVSISSNVLSI
CEEEEECCHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHCCEECCCEEEE
KNTDDPINLEVTTHLKISKNKDRFSGNLKSITSVEGLKDPLPYAILTPYSGIWHDDKKIH
ECCCCCEEEEEEEEEEEECCCHHHCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEE
YGTTLTTYLTAHGIDKPEGYLGATSPLIIKKCPYDPYIHHGDGDTLQNCLKNGYFHESAD
ECCEEEEEHEECCCCCCCCCCCCCCCEEEEECCCCCCEECCCCHHHHHHHHCCCEECCCC
GSCYLCRLEGKGICPHYGFEVFIVPHCVGVEYSVSGSDHVVFHDRYPGHKINPEDPTELF
CCEEEEEECCCCCCCCCCEEEEEEEEEECEEEEECCCCEEEECCCCCCCCCCCCCHHHHH
LDVAHRTKYGVLV
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA