| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is trpE [H]
Identifier: 148643206
GI number: 148643206
Start: 1124386
End: 1125894
Strand: Reverse
Name: trpE [H]
Synonym: Msm_1146
Alternate gene names: 148643206
Gene position: 1125894-1124386 (Counterclockwise)
Preceding gene: 148643207
Following gene: 148643205
Centisome position: 60.76
GC content: 33.0
Gene sequence:
>1509_bases ATGTTTTCCCCAAGTTTGGAAGAAGTAAAAGAAATTGCAAAAAATAAAGAATATAAAAGAATTCCAGTAGCTTATGAGTT ATACTCAGATATGGCTACTCCAATAGAAGTATTAAGGATTTTAAAAGAAATCAGTAAACATTGTTATATGCTGGAAAGTG TTGAAGATTCACAAAAATGGGGAAGATACACCTTTTTAGGATTTGATCCGCTTTTAGAGTTTACCTGTCAAAATGGATGT GTTCAAATTAAGGGAGACAGCAAATTTGAAGACAGTTCCAAATTAACAGATGATGATAAGGTAATTATTGAAACAAACAA TCCTGGTGAAGTTATTAAAGATTTGGTCAGACAAAACAAATCTCCAAAATTAACTAATTTGCCTCCATTTACTGGAGGAT TTGTGGGATATTTTGCTTATGATTATATTAAATATGCAGAACCTTCCCTAAACCTCGATGCTGAAAATCAGGATCAATTT AAAGACATTGATTTGATGTTGTTTGATAAGGTTGTTGCATTTGATAATTTCAGACAAAAAATTGTTTTGATTGCAAATAT GAAAACAGACAATTTGGATGAAAACTATAAGAAAGCCTGTGATGATTTGGAAAAAATAGCCAGATTAATTAAAACAGGAA AAAAAGCAAAAATAGAACCTCTGACATTAAAATCTGATTTCAAACCAGTATTTTCACGTGAAAAATATTGTCAAATGGTT AATAAGGCTAAAGATTACATTAAAGAGGGGGATATTTTTCAGGTTGTACTGTCAAACAGGATTGAAGCAGATATTTCAGG AAGCTTGTTTGATACATACAGGGTCTTGAGAACTACAAATCCTTCACCCTATATGTTTTATTTTTCAAGTAATGACATTG AAATAGCCGGTGCTTCACCTGAAACCCTGGTTAAATTAAACAATAGAAAATTATACACTTTTCCACTAGCGGGAACAAGA CCTAGAGGAAAAACGGAAAGTGAAGATTTGGCCCTTGAAAAAGAGCTTTTAAGTGATGAAAAAGAATTGGCTGAACATAA TATGCTTGTAGACCTGGGACGTAATGATATTGGAAAAATATCTGAAATAGGATCTGTCAATGTTGATAAATACCTGTCAA TTGAGAGGTTTTCTCATGTAATGCATATTGGTTCAACAGTAACTGGAACTTTAAGAAAAGATCTGGATTCACTTGCGGCT ATTGATTCCATACTTCCTGCAGGAACACTGTCCGGAGCTCCAAAAATAAGAGCATGTGAAATTATTAATGAACTTGAAAA TAATAAAAGAGGGATTTATGGTGGAGCTATTGGATATATTGATTTAAGTGGCAATGTAGACACCTGCATATCAATCAGGA TTGCTTTTGCACGTAATAATAAAGTTTTCATAAGGTCAGGTGCAGGAATTGTAGCTGACAGTGTTCCGGATAATGAATTT GACGAGTGTTTAAATAAAGCAGCAGCAGTTATTGATGCTTTAAAAATAGCTGACGGGGGAATTTTATGA
Upstream 100 bases:
>100_bases AGGACAAATTATAATTTTTTTTCAAATATTTTAAAATGTACAAAAAAGTACAACAAGGATTTAAATAGTACATTATTCTA ATTATATTATAGTGATTAAA
Downstream 100 bases:
>100_bases TTTTATTAATAGATAACTATGATAGCTTTTCATATAATTTATATCAATTAATCGGACAGGTAAATAGGGATATTGAAGTT TATAGAAATGATAAAATCAC
Product: anthranilate/para-aminobenzoate synthase component I, TrpE
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MFSPSLEEVKEIAKNKEYKRIPVAYELYSDMATPIEVLRILKEISKHCYMLESVEDSQKWGRYTFLGFDPLLEFTCQNGC VQIKGDSKFEDSSKLTDDDKVIIETNNPGEVIKDLVRQNKSPKLTNLPPFTGGFVGYFAYDYIKYAEPSLNLDAENQDQF KDIDLMLFDKVVAFDNFRQKIVLIANMKTDNLDENYKKACDDLEKIARLIKTGKKAKIEPLTLKSDFKPVFSREKYCQMV NKAKDYIKEGDIFQVVLSNRIEADISGSLFDTYRVLRTTNPSPYMFYFSSNDIEIAGASPETLVKLNNRKLYTFPLAGTR PRGKTESEDLALEKELLSDEKELAEHNMLVDLGRNDIGKISEIGSVNVDKYLSIERFSHVMHIGSTVTGTLRKDLDSLAA IDSILPAGTLSGAPKIRACEIINELENNKRGIYGGAIGYIDLSGNVDTCISIRIAFARNNKVFIRSGAGIVADSVPDNEF DECLNKAAAVIDALKIADGGIL
Sequences:
>Translated_502_residues MFSPSLEEVKEIAKNKEYKRIPVAYELYSDMATPIEVLRILKEISKHCYMLESVEDSQKWGRYTFLGFDPLLEFTCQNGC VQIKGDSKFEDSSKLTDDDKVIIETNNPGEVIKDLVRQNKSPKLTNLPPFTGGFVGYFAYDYIKYAEPSLNLDAENQDQF KDIDLMLFDKVVAFDNFRQKIVLIANMKTDNLDENYKKACDDLEKIARLIKTGKKAKIEPLTLKSDFKPVFSREKYCQMV NKAKDYIKEGDIFQVVLSNRIEADISGSLFDTYRVLRTTNPSPYMFYFSSNDIEIAGASPETLVKLNNRKLYTFPLAGTR PRGKTESEDLALEKELLSDEKELAEHNMLVDLGRNDIGKISEIGSVNVDKYLSIERFSHVMHIGSTVTGTLRKDLDSLAA IDSILPAGTLSGAPKIRACEIINELENNKRGIYGGAIGYIDLSGNVDTCISIRIAFARNNKVFIRSGAGIVADSVPDNEF DECLNKAAAVIDALKIADGGIL >Mature_502_residues MFSPSLEEVKEIAKNKEYKRIPVAYELYSDMATPIEVLRILKEISKHCYMLESVEDSQKWGRYTFLGFDPLLEFTCQNGC VQIKGDSKFEDSSKLTDDDKVIIETNNPGEVIKDLVRQNKSPKLTNLPPFTGGFVGYFAYDYIKYAEPSLNLDAENQDQF KDIDLMLFDKVVAFDNFRQKIVLIANMKTDNLDENYKKACDDLEKIARLIKTGKKAKIEPLTLKSDFKPVFSREKYCQMV NKAKDYIKEGDIFQVVLSNRIEADISGSLFDTYRVLRTTNPSPYMFYFSSNDIEIAGASPETLVKLNNRKLYTFPLAGTR PRGKTESEDLALEKELLSDEKELAEHNMLVDLGRNDIGKISEIGSVNVDKYLSIERFSHVMHIGSTVTGTLRKDLDSLAA IDSILPAGTLSGAPKIRACEIINELENNKRGIYGGAIGYIDLSGNVDTCISIRIAFARNNKVFIRSGAGIVADSVPDNEF DECLNKAAAVIDALKIADGGIL
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=373, Percent_Identity=38.0697050938338, Blast_Score=238, Evalue=5e-64, Organism=Escherichia coli, GI1788114, Length=410, Percent_Identity=31.219512195122, Blast_Score=218, Evalue=9e-58, Organism=Escherichia coli, GI1786809, Length=267, Percent_Identity=28.4644194756554, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87082077, Length=297, Percent_Identity=25.9259259259259, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6320935, Length=454, Percent_Identity=37.2246696035242, Blast_Score=279, Evalue=6e-76, Organism=Saccharomyces cerevisiae, GI6324361, Length=393, Percent_Identity=23.1552162849873, Blast_Score=107, Evalue=6e-24,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 56298; Mature: 56298
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSPSLEEVKEIAKNKEYKRIPVAYELYSDMATPIEVLRILKEISKHCYMLESVEDSQKW CCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHC GRYTFLGFDPLLEFTCQNGCVQIKGDSKFEDSSKLTDDDKVIIETNNPGEVIKDLVRQNK CCEEEEEHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCC SPKLTNLPPFTGGFVGYFAYDYIKYAEPSLNLDAENQDQFKDIDLMLFDKVVAFDNFRQK CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE IVLIANMKTDNLDENYKKACDDLEKIARLIKTGKKAKIEPLTLKSDFKPVFSREKYCQMV EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHH NKAKDYIKEGDIFQVVLSNRIEADISGSLFDTYRVLRTTNPSPYMFYFSSNDIEIAGASP HHHHHHHHCCCEEEEEHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCCC ETLVKLNNRKLYTFPLAGTRPRGKTESEDLALEKELLSDEKELAEHNMLVDLGRNDIGKI CCEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCHH SEIGSVNVDKYLSIERFSHVMHIGSTVTGTLRKDLDSLAAIDSILPAGTLSGAPKIRACE HHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IINELENNKRGIYGGAIGYIDLSGNVDTCISIRIAFARNNKVFIRSGAGIVADSVPDNEF HHHHHHCCCCCEECCEEEEEEECCCCCEEEEEEEEEEECCEEEEEECCCEEECCCCCHHH DECLNKAAAVIDALKIADGGIL HHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFSPSLEEVKEIAKNKEYKRIPVAYELYSDMATPIEVLRILKEISKHCYMLESVEDSQKW CCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHC GRYTFLGFDPLLEFTCQNGCVQIKGDSKFEDSSKLTDDDKVIIETNNPGEVIKDLVRQNK CCEEEEEHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCC SPKLTNLPPFTGGFVGYFAYDYIKYAEPSLNLDAENQDQFKDIDLMLFDKVVAFDNFRQK CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE IVLIANMKTDNLDENYKKACDDLEKIARLIKTGKKAKIEPLTLKSDFKPVFSREKYCQMV EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHH NKAKDYIKEGDIFQVVLSNRIEADISGSLFDTYRVLRTTNPSPYMFYFSSNDIEIAGASP HHHHHHHHCCCEEEEEHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCCC ETLVKLNNRKLYTFPLAGTRPRGKTESEDLALEKELLSDEKELAEHNMLVDLGRNDIGKI CCEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCEEEECCCCCCCHH SEIGSVNVDKYLSIERFSHVMHIGSTVTGTLRKDLDSLAAIDSILPAGTLSGAPKIRACE HHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH IINELENNKRGIYGGAIGYIDLSGNVDTCISIRIAFARNNKVFIRSGAGIVADSVPDNEF HHHHHHCCCCCEECCEEEEEEECCCCCEEEEEEEEEEECCEEEEEECCCEEECCCCCHHH DECLNKAAAVIDALKIADGGIL HHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2732211 [H]