| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643207
Identifier: 148643207
GI number: 148643207
Start: 1125981
End: 1126379
Strand: Reverse
Name: 148643207
Synonym: Msm_1147
Alternate gene names: NA
Gene position: 1126379-1125981 (Counterclockwise)
Preceding gene: 148643208
Following gene: 148643206
Centisome position: 60.78
GC content: 28.07
Gene sequence:
>399_bases ATGGATACTAAAAAGATAGGAATTGCAATAATCGTTGTGGGATTATCTTTGTGTGTAATGTTTATTGATTCTTACAAATA TCTGGTTTCTGCACTGACTGTTGTTATTTTAGGATTTCTTATAACATTAATAGGATATTTGGCGGATGTTAAAAAGCAAA AATTCATTAATGATAAGTTAAATGAGGACATTGAAAGGGTTATTCAGCCTTTAATAACCAAATATTCTAATTTAAATAAA CAGTATTCTAGCCAGTATGACGGTGAAGAATATATTCAAAAAAGGATGGAAATAAATCGTAATTTGGAAAAGGAACTTAC TGAAAATCTTCCTTATTTGGAAAGCAGGCAAATTAAAAAAATTGTCATTGATTTCAGTAAAGAACAGGACAAATTATAA
Upstream 100 bases:
>100_bases TATTTGATATTGAACTCTTTAAAGATTGAGTGGAAATTTTTAGATAAAAAATAATATTTTATATATGCTGAAAATTAATT ATAAATTAGGTGTTTTTGAT
Downstream 100 bases:
>100_bases TTTTTTTTCAAATATTTTAAAATGTACAAAAAAGTACAACAAGGATTTAAATAGTACATTATTCTAATTATATTATAGTG ATTAAAATGTTTTCCCCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MDTKKIGIAIIVVGLSLCVMFIDSYKYLVSALTVVILGFLITLIGYLADVKKQKFINDKLNEDIERVIQPLITKYSNLNK QYSSQYDGEEYIQKRMEINRNLEKELTENLPYLESRQIKKIVIDFSKEQDKL
Sequences:
>Translated_132_residues MDTKKIGIAIIVVGLSLCVMFIDSYKYLVSALTVVILGFLITLIGYLADVKKQKFINDKLNEDIERVIQPLITKYSNLNK QYSSQYDGEEYIQKRMEINRNLEKELTENLPYLESRQIKKIVIDFSKEQDKL >Mature_132_residues MDTKKIGIAIIVVGLSLCVMFIDSYKYLVSALTVVILGFLITLIGYLADVKKQKFINDKLNEDIERVIQPLITKYSNLNK QYSSQYDGEEYIQKRMEINRNLEKELTENLPYLESRQIKKIVIDFSKEQDKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15385; Mature: 15385
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTKKIGIAIIVVGLSLCVMFIDSYKYLVSALTVVILGFLITLIGYLADVKKQKFINDKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEDIERVIQPLITKYSNLNKQYSSQYDGEEYIQKRMEINRNLEKELTENLPYLESRQIKK HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHH IVIDFSKEQDKL HHHHHHHHCCCC >Mature Secondary Structure MDTKKIGIAIIVVGLSLCVMFIDSYKYLVSALTVVILGFLITLIGYLADVKKQKFINDKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEDIERVIQPLITKYSNLNKQYSSQYDGEEYIQKRMEINRNLEKELTENLPYLESRQIKK HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHH IVIDFSKEQDKL HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA