| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
Click here to switch to the map view.
The map label for this gene is 148642998
Identifier: 148642998
GI number: 148642998
Start: 898537
End: 898884
Strand: Reverse
Name: 148642998
Synonym: Msm_0938
Alternate gene names: NA
Gene position: 898884-898537 (Counterclockwise)
Preceding gene: 148642999
Following gene: 148642994
Centisome position: 48.51
GC content: 31.9
Gene sequence:
>348_bases GTGGGAATTGCAATAGCTGCCGTAATTTTAATTGTTGCAGTATTTGCAATTATAAATTATGATAATGATAAAATAATAAT TAATGGTAATTTTAACCTTGTTGGAGATTCTCAAATAGATTGGAATGATACAACACAGGAATGCAGTGTGTTTCAGAATT TTGCTTCCAATGATGGCGGAAGCTATGATGTTTTAAAAGTTACATTGGCATTCTATAAGGACGGTAAATTAATTGGAACT AATGATACAGTAGTAACTGGTGACAGTTTTAAAGATTTTAGTGTGAATACCACTACAAAACTTCCTCAAAAGCCAGACGG ATTTACTTTCGACATCCATACAATTTAG
Upstream 100 bases:
>100_bases TTTAATTTTTTTTCTTTTATAAGTTCACTAAATAAGAATATTTATATACTTAATGAGAAATAATCTTATTTGATGATGTG TTTTGGATAAGAGGTTAATT
Downstream 100 bases:
>100_bases GGAGAAATATCAAATATCTCTCTGCAAAATTCTTTTCCTGTTTTTGTTTTAAAAATATTTTCATAAACCTTTTTTATATC TTCCTTGGAAGTGTTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGIAIAAVILIVAVFAIINYDNDKIIINGNFNLVGDSQIDWNDTTQECSVFQNFASNDGGSYDVLKVTLAFYKDGKLIGT NDTVVTGDSFKDFSVNTTTKLPQKPDGFTFDIHTI
Sequences:
>Translated_115_residues MGIAIAAVILIVAVFAIINYDNDKIIINGNFNLVGDSQIDWNDTTQECSVFQNFASNDGGSYDVLKVTLAFYKDGKLIGT NDTVVTGDSFKDFSVNTTTKLPQKPDGFTFDIHTI >Mature_114_residues GIAIAAVILIVAVFAIINYDNDKIIINGNFNLVGDSQIDWNDTTQECSVFQNFASNDGGSYDVLKVTLAFYKDGKLIGTN DTVVTGDSFKDFSVNTTTKLPQKPDGFTFDIHTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12547; Mature: 12416
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIAIAAVILIVAVFAIINYDNDKIIINGNFNLVGDSQIDWNDTTQECSVFQNFASNDGG CCHHHHHHHHHHHHHHHEECCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCC SYDVLKVTLAFYKDGKLIGTNDTVVTGDSFKDFSVNTTTKLPQKPDGFTFDIHTI CEEEEEEEEEEECCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure GIAIAAVILIVAVFAIINYDNDKIIINGNFNLVGDSQIDWNDTTQECSVFQNFASNDGG CHHHHHHHHHHHHHHHEECCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCC SYDVLKVTLAFYKDGKLIGTNDTVVTGDSFKDFSVNTTTKLPQKPDGFTFDIHTI CEEEEEEEEEEECCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA