| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642994
Identifier: 148642994
GI number: 148642994
Start: 895000
End: 896100
Strand: Reverse
Name: 148642994
Synonym: Msm_0934
Alternate gene names: NA
Gene position: 896100-895000 (Counterclockwise)
Preceding gene: 148642998
Following gene: 148642993
Centisome position: 48.36
GC content: 32.15
Gene sequence:
>1101_bases ATGGAAAATACTAATTTGAATATTATCACTAAAGATTATGGGATATGTATTAATAATTCTGATTATTTTCTAGCATTTAG CGACTTTACTGTTAGTGATGGTATTGACATTGTTGAAAATGTCAATATTTTAAAAAGTAAAGATGATTTTGAGAAAACTG CTAAAAAAGCAGAAGCTTTCAACCATTCTGAAGGATCATATATTGCACAGGCAGTTAATTCAATTGATTATTTTTCAAAT ACTTATGGGGATTTAACATTATTTACTTTTATGGCTAATGATGTGGTTATTGAAGATTTCACTGAAAATCTTAAAGTAGC CAATTCTCCTAAAGGTTTCGCAGATGCCAGAATTGATATAAATCATGTTTTATATATTAATAAAACTTTATCTCCTGGAA TGTTGTTAAAAATTTATAAAACTGTTGTTAAAGCTAAAGCAGAGTTTTTACGTGGTCTTTGCCTACCGTTACATATAGAA AATATTTTAAATAAAAATGATTTTCTGGCAGTGCTTTGTAATGTGGCTCAAACTAGCTTAATTGATGAAAACAGTGTGGA TATTATAAATAATCAATATGAAGATGACCAGCTGATTTTTGAAGAGTTGGCTACTTCAATTGAGGAAGCAGTTATAATCA GCTGTGAAGACGCAATAGAAAAGCTTGAATTGTCTTTTGGAATATTGGATTACTTTGTATCTGAAGGTATTTTGTTAGGG GATTTGGTGGAAGCAGGATTGGCACTTGTTGCAGGTGTGGAAGTTACTGAAGAAATTTCAGAAAAACTTGAGGCACAAAT CTTAAAATCATTATGTGATATTAATGTTATTGCTTTGTTGATGGCAGCTATCAGGACGGAAGCTGATTTTACCGGTGGAA GAATAAGGGAAGTTGATGTAAGTGATGATCCGGCATATCTCTACACTGATGAAGTGTTGGGATTAGCTATTTCTAATCAG ATTGCGGGAACTAAAGCAACATTTAACTTTAAACGCTATGATGAAGCAAAACCTGGAATTATTGGTGGTTTAGGACCTAT GGTAGATGACATATTTGCCGGTTTAATTGCGGGATGTATGTCAAAAATTTTTGAGGAGTAG
Upstream 100 bases:
>100_bases ATTTTTCCCCTATATTTCTTATTTATTTTCATTATTAAAAAATTTATATTAAGAATTACTATATACCATATACTACATAT AAATAATAACAGGTTAAATC
Downstream 100 bases:
>100_bases ATAAAATATGGAAAATAATGAACATGAAAGATTTTCACCAATCAAATCTCTGTTAGGACTTTTGTCTTTTTCAACTATTA TTCCAGTTAAACAGTATACT
Product: phosphatidylglycerophosphatase A-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MENTNLNIITKDYGICINNSDYFLAFSDFTVSDGIDIVENVNILKSKDDFEKTAKKAEAFNHSEGSYIAQAVNSIDYFSN TYGDLTLFTFMANDVVIEDFTENLKVANSPKGFADARIDINHVLYINKTLSPGMLLKIYKTVVKAKAEFLRGLCLPLHIE NILNKNDFLAVLCNVAQTSLIDENSVDIINNQYEDDQLIFEELATSIEEAVIISCEDAIEKLELSFGILDYFVSEGILLG DLVEAGLALVAGVEVTEEISEKLEAQILKSLCDINVIALLMAAIRTEADFTGGRIREVDVSDDPAYLYTDEVLGLAISNQ IAGTKATFNFKRYDEAKPGIIGGLGPMVDDIFAGLIAGCMSKIFEE
Sequences:
>Translated_366_residues MENTNLNIITKDYGICINNSDYFLAFSDFTVSDGIDIVENVNILKSKDDFEKTAKKAEAFNHSEGSYIAQAVNSIDYFSN TYGDLTLFTFMANDVVIEDFTENLKVANSPKGFADARIDINHVLYINKTLSPGMLLKIYKTVVKAKAEFLRGLCLPLHIE NILNKNDFLAVLCNVAQTSLIDENSVDIINNQYEDDQLIFEELATSIEEAVIISCEDAIEKLELSFGILDYFVSEGILLG DLVEAGLALVAGVEVTEEISEKLEAQILKSLCDINVIALLMAAIRTEADFTGGRIREVDVSDDPAYLYTDEVLGLAISNQ IAGTKATFNFKRYDEAKPGIIGGLGPMVDDIFAGLIAGCMSKIFEE >Mature_366_residues MENTNLNIITKDYGICINNSDYFLAFSDFTVSDGIDIVENVNILKSKDDFEKTAKKAEAFNHSEGSYIAQAVNSIDYFSN TYGDLTLFTFMANDVVIEDFTENLKVANSPKGFADARIDINHVLYINKTLSPGMLLKIYKTVVKAKAEFLRGLCLPLHIE NILNKNDFLAVLCNVAQTSLIDENSVDIINNQYEDDQLIFEELATSIEEAVIISCEDAIEKLELSFGILDYFVSEGILLG DLVEAGLALVAGVEVTEEISEKLEAQILKSLCDINVIALLMAAIRTEADFTGGRIREVDVSDDPAYLYTDEVLGLAISNQ IAGTKATFNFKRYDEAKPGIIGGLGPMVDDIFAGLIAGCMSKIFEE
Specific function: Unknown
COG id: COG1267
COG function: function code I; Phosphatidylglycerophosphatase A and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007686 [H]
Pfam domain/function: PF04608 PgpA [H]
EC number: NA
Molecular weight: Translated: 40296; Mature: 40296
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENTNLNIITKDYGICINNSDYFLAFSDFTVSDGIDIVENVNILKSKDDFEKTAKKAEAF CCCCCEEEEEECCCEEECCCCEEEEEECCCCCCCCHHHHCCHHHCCCHHHHHHHHHHHHC NHSEGSYIAQAVNSIDYFSNTYGDLTLFTFMANDVVIEDFTENLKVANSPKGFADARIDI CCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHCCEECCCCCCCCCCEEEE NHVLYINKTLSPGMLLKIYKTVVKAKAEFLRGLCLPLHIENILNKNDFLAVLCNVAQTSL EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH IDENSVDIINNQYEDDQLIFEELATSIEEAVIISCEDAIEKLELSFGILDYFVSEGILLG CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCHH DLVEAGLALVAGVEVTEEISEKLEAQILKSLCDINVIALLMAAIRTEADFTGGRIREVDV HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC SDDPAYLYTDEVLGLAISNQIAGTKATFNFKRYDEAKPGIIGGLGPMVDDIFAGLIAGCM CCCCCEEEHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH SKIFEE HHHHCC >Mature Secondary Structure MENTNLNIITKDYGICINNSDYFLAFSDFTVSDGIDIVENVNILKSKDDFEKTAKKAEAF CCCCCEEEEEECCCEEECCCCEEEEEECCCCCCCCHHHHCCHHHCCCHHHHHHHHHHHHC NHSEGSYIAQAVNSIDYFSNTYGDLTLFTFMANDVVIEDFTENLKVANSPKGFADARIDI CCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHCCHHHHHHHHCCEECCCCCCCCCCEEEE NHVLYINKTLSPGMLLKIYKTVVKAKAEFLRGLCLPLHIENILNKNDFLAVLCNVAQTSL EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH IDENSVDIINNQYEDDQLIFEELATSIEEAVIISCEDAIEKLELSFGILDYFVSEGILLG CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCCCCHH DLVEAGLALVAGVEVTEEISEKLEAQILKSLCDINVIALLMAAIRTEADFTGGRIREVDV HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC SDDPAYLYTDEVLGLAISNQIAGTKATFNFKRYDEAKPGIIGGLGPMVDDIFAGLIAGCM CCCCCEEEHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH SKIFEE HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]