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The map label for this gene is tpiA

Identifier: 148642979

GI number: 148642979

Start: 883561

End: 884229

Strand: Reverse

Name: tpiA

Synonym: Msm_0919

Alternate gene names: 148642979

Gene position: 884229-883561 (Counterclockwise)

Preceding gene: 148642981

Following gene: 148642978

Centisome position: 47.71

GC content: 35.13

Gene sequence:

>669_bases
ATGAATACGCCAATTGTAATATTAAATTATAAAACTTATTTGGAATCTAGCGGGGAAAATGCATTGGAGTTAGCTCGTGC
ATTAAAAAGTGCTTCTGAAGAATCTGGTATAACTATGGTTGCAGCTCCACAAGCGGCAGATATTTATAGGATTCAGGATC
AAATTTCTTTACCTATTTTTGCACAGCACATTGATCCAATTACTCCTGGAGGACATACAGGTTCTAATTTAATTGAAACT
TTAATTGAAGCAGGTATAAGCGGTAGTTTAATTAACCACTCTGAAAATAGAATGAAACTGGCTGATATTGATGAAGTTAT
ACAATTGTGTAAGCAAAATGATATTGAATCCTGTGTTTGTACAAACAATATTGCAACTAGTAAAGCAATAGCTACTTTCA
GTCCCGATGCAGTAGCTGTAGAACCTCCGGAACTTATTGGTACAGGTATTCCAGTATCTCAGGCACAGCCTGAAGTTGTT
GAAGACTCTGTTAAAGGAGTTAAATCAATCAACAAAAAAATCAAAGTCTTATGCGGTGCAGGAATATCAACTGGTGATGA
TATGAAAGCCGCAATGGATTTAGGTGCAGATGGAGTTTTATTAGCTTCAGGTATTGTTAAGGCTAAAAATCCTAAAGAAG
CTTTACTTGATTTGGTTAGTAAATTATAA

Upstream 100 bases:

>100_bases
ATTTTGTGTATATTTGGATATTATCCAAAAGTATTTTGGTTAAATTTAAATTATTTCAAATCAAAAATATTAATTAAATC
AATGATTTGGGGAATTATTT

Downstream 100 bases:

>100_bases
AAACTTGTATTTTTATAAATATCTATATTTAATATTTTGAGTGAAATGATGGCTGATAAATTTAATACAATTGATGACTT
TGATGTTGAAAATAAAACTG

Product: triosephosphate isomerase

Products: NA

Alternate protein names: TIM; Triose-phosphate isomerase

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNTPIVILNYKTYLESSGENALELARALKSASEESGITMVAAPQAADIYRIQDQISLPIFAQHIDPITPGGHTGSNLIET
LIEAGISGSLINHSENRMKLADIDEVIQLCKQNDIESCVCTNNIATSKAIATFSPDAVAVEPPELIGTGIPVSQAQPEVV
EDSVKGVKSINKKIKVLCGAGISTGDDMKAAMDLGADGVLLASGIVKAKNPKEALLDLVSKL

Sequences:

>Translated_222_residues
MNTPIVILNYKTYLESSGENALELARALKSASEESGITMVAAPQAADIYRIQDQISLPIFAQHIDPITPGGHTGSNLIET
LIEAGISGSLINHSENRMKLADIDEVIQLCKQNDIESCVCTNNIATSKAIATFSPDAVAVEPPELIGTGIPVSQAQPEVV
EDSVKGVKSINKKIKVLCGAGISTGDDMKAAMDLGADGVLLASGIVKAKNPKEALLDLVSKL
>Mature_222_residues
MNTPIVILNYKTYLESSGENALELARALKSASEESGITMVAAPQAADIYRIQDQISLPIFAQHIDPITPGGHTGSNLIET
LIEAGISGSLINHSENRMKLADIDEVIQLCKQNDIESCVCTNNIATSKAIATFSPDAVAVEPPELIGTGIPVSQAQPEVV
EDSVKGVKSINKKIKVLCGAGISTGDDMKAAMDLGADGVLLASGIVKAKNPKEALLDLVSKL

Specific function: Unknown

COG id: COG0149

COG function: function code G; Triosephosphate isomerase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the triosephosphate isomerase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TPIS_METS3 (A5ULP6)

Other databases:

- EMBL:   CP000678
- RefSeq:   YP_001273492.1
- ProteinModelPortal:   A5ULP6
- SMR:   A5ULP6
- STRING:   A5ULP6
- GeneID:   5217483
- GenomeReviews:   CP000678_GR
- KEGG:   msi:Msm_0919
- eggNOG:   arNOG04711
- HOGENOM:   HBG297256
- OMA:   VEPPELI
- ProtClustDB:   PRK04302
- GO:   GO:0005737
- GO:   GO:0006094
- GO:   GO:0006096
- HAMAP:   MF_00147_A
- InterPro:   IPR013785
- InterPro:   IPR000652
- InterPro:   IPR022891
- InterPro:   IPR020861
- Gene3D:   G3DSA:3.20.20.70
- TIGRFAMs:   TIGR00419

Pfam domain/function: PF00121 TIM; SSF51351 Triophos_ismrse

EC number: =5.3.1.1

Molecular weight: Translated: 23306; Mature: 23306

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00171 TIM_1; PS51440 TIM_2

Important sites: ACT_SITE 93-93 ACT_SITE 141-141 BINDING 9-9 BINDING 11-11

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPIVILNYKTYLESSGENALELARALKSASEESGITMVAAPQAADIYRIQDQISLPIF
CCCCEEEEEHHHHHCCCCCHHHHHHHHHHHCHHHCCEEEEECCCCCHHHHHHHHCCCCHH
AQHIDPITPGGHTGSNLIETLIEAGISGSLINHSENRMKLADIDEVIQLCKQNDIESCVC
HHHCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCEEHHCHHHHHHHHHCCCCCHHHH
TNNIATSKAIATFSPDAVAVEPPELIGTGIPVSQAQPEVVEDSVKGVKSINKKIKVLCGA
CCCCCCCCEEEEECCCCEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECC
GISTGDDMKAAMDLGADGVLLASGIVKAKNPKEALLDLVSKL
CCCCCCHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNTPIVILNYKTYLESSGENALELARALKSASEESGITMVAAPQAADIYRIQDQISLPIF
CCCCEEEEEHHHHHCCCCCHHHHHHHHHHHCHHHCCEEEEECCCCCHHHHHHHHCCCCHH
AQHIDPITPGGHTGSNLIETLIEAGISGSLINHSENRMKLADIDEVIQLCKQNDIESCVC
HHHCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCEEHHCHHHHHHHHHCCCCCHHHH
TNNIATSKAIATFSPDAVAVEPPELIGTGIPVSQAQPEVVEDSVKGVKSINKKIKVLCGA
CCCCCCCCEEEEECCCCEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECC
GISTGDDMKAAMDLGADGVLLASGIVKAKNPKEALLDLVSKL
CCCCCCHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA