Click here to switch to the map view.

The map label for this gene is 148642981

Identifier: 148642981

GI number: 148642981

Start: 884720

End: 885328

Strand: Reverse

Name: 148642981

Synonym: Msm_0921

Alternate gene names: NA

Gene position: 885328-884720 (Counterclockwise)

Preceding gene: 148642983

Following gene: 148642979

Centisome position: 47.77

GC content: 28.57

Gene sequence:

>609_bases
ATGGATAATAAAATTTTAGTTCTTGTTTGTGCAGTTATACTAATTTTAGCAGTTATTGTTTCTGCTTTTGTTTTTATAAA
TCCGCAGGAAGAATCATCATTAACAATTACAAGTAATGCAACTTTATATGATGGAGATAATTGTACGGTTAAGCTAACTG
ATGAAAATGGTCTTGGAATATCTAATAAAACAGTTAATGTAACTTTAACTGATGAAAAAGGATTAAAATCTAATTTTAAA
TATATTACTGATAATGAAGGGTTAATTAGTTTTAATATAAGTGGTGTTGGTAATTATTCTATTAATTGTGTTTTTGATGG
GGATGGGAACTATAAAAGTACTAATGTAACTCAAAATGTAAGTGTTATTAGTAATGTAGTTCAAGATGGAAATAATGGAT
TTAAAGATACATCTAATCAAAAATCATCTTCTTATTATGAAGATGATCATTTGTCCTGTGAACAATTAAAAGCCAAATAT
CCTGAAATGTCTGACGGCGAATTATTTGAGAGATTCGGTGAAAGAGGGGATAATGGAATAATGTATAATGGAAAACATGT
ATGGGAAGATAGGGGTGATGGAAGAACATATAGTGGACATCCTATTTAG

Upstream 100 bases:

>100_bases
TAATATTTTGTTTGTTGACTAACTTTTTAATTCATGTATATCAAAAAGTATTGTTTGAAAAAAGTTATGTTTTAATAATT
ATTTAACCATATTATTTATT

Downstream 100 bases:

>100_bases
CAGTCTCAATAATTTGAGCTGCTATTCGTCATAATATTCCCAGCTGTCTCCGTACCTGTCATCATAGTATGCATCATCGT
AGTAGTAATCATCACCTATG

Product: surface protein

Products: NA

Alternate protein names: Surface Protein

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MDNKILVLVCAVILILAVIVSAFVFINPQEESSLTITSNATLYDGDNCTVKLTDENGLGISNKTVNVTLTDEKGLKSNFK
YITDNEGLISFNISGVGNYSINCVFDGDGNYKSTNVTQNVSVISNVVQDGNNGFKDTSNQKSSSYYEDDHLSCEQLKAKY
PEMSDGELFERFGERGDNGIMYNGKHVWEDRGDGRTYSGHPI

Sequences:

>Translated_202_residues
MDNKILVLVCAVILILAVIVSAFVFINPQEESSLTITSNATLYDGDNCTVKLTDENGLGISNKTVNVTLTDEKGLKSNFK
YITDNEGLISFNISGVGNYSINCVFDGDGNYKSTNVTQNVSVISNVVQDGNNGFKDTSNQKSSSYYEDDHLSCEQLKAKY
PEMSDGELFERFGERGDNGIMYNGKHVWEDRGDGRTYSGHPI
>Mature_202_residues
MDNKILVLVCAVILILAVIVSAFVFINPQEESSLTITSNATLYDGDNCTVKLTDENGLGISNKTVNVTLTDEKGLKSNFK
YITDNEGLISFNISGVGNYSINCVFDGDGNYKSTNVTQNVSVISNVVQDGNNGFKDTSNQKSSSYYEDDHLSCEQLKAKY
PEMSDGELFERFGERGDNGIMYNGKHVWEDRGDGRTYSGHPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22212; Mature: 22212

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKILVLVCAVILILAVIVSAFVFINPQEESSLTITSNATLYDGDNCTVKLTDENGLGI
CCCCEEHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCEEEECCCCEEEEECCCCCCC
SNKTVNVTLTDEKGLKSNFKYITDNEGLISFNISGVGNYSINCVFDGDGNYKSTNVTQNV
CCCEEEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEECCCCCEECCCCCHHH
SVISNVVQDGNNGFKDTSNQKSSSYYEDDHLSCEQLKAKYPEMSDGELFERFGERGDNGI
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCE
MYNGKHVWEDRGDGRTYSGHPI
EECCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MDNKILVLVCAVILILAVIVSAFVFINPQEESSLTITSNATLYDGDNCTVKLTDENGLGI
CCCCEEHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCEEEECCCCEEEEECCCCCCC
SNKTVNVTLTDEKGLKSNFKYITDNEGLISFNISGVGNYSINCVFDGDGNYKSTNVTQNV
CCCEEEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEECCCCCEECCCCCHHH
SVISNVVQDGNNGFKDTSNQKSSSYYEDDHLSCEQLKAKYPEMSDGELFERFGERGDNGI
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCCCCCCE
MYNGKHVWEDRGDGRTYSGHPI
EECCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA