Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642459

Identifier: 148642459

GI number: 148642459

Start: 381123

End: 381788

Strand: Reverse

Name: 148642459

Synonym: Msm_0399

Alternate gene names: NA

Gene position: 381788-381123 (Counterclockwise)

Preceding gene: 148642460

Following gene: 148642452

Centisome position: 20.6

GC content: 28.68

Gene sequence:

>666_bases
ATGAAGGTATTGTTTAAATGGAGCTTCAATGAACTTATTATGATTTTATTGGCAAATAGTGTGTTTTCTTTTTTATTTAG
TATGGTTATATATAAAAGAGAATGGATTGATGAAAAATATGGTTTGGGCTATGATGGATACTACATTGTTCCTGGAAGAA
ATGAAGGAATGTCTTATAAAGCAGCTATTGTTTTAATTACAACAGCTGCTCCATTATTTTCTATACTTTTCTTTGTAATG
GGTTTGCATTATGGTAATATAATTGTAGCAACAGCTTTTCTTATTGCCATGCCTATCCCATTTATTTTGATGTTTTTAAG
GATCGATGCTTATGAAAATAAGATAATTGTCACACCCAAACAATTAGATTATTGCCCTCCATTTTATTTCATGCTGGGTC
AGCTTAATGCAATGGCAGGTCTTGAATTTTCAATAAGGACTATTTTAATTAGTTTGATTTATGGTACTTATCCATTAATT
TGGGCAATATTGTATTTTTTATTTTCTTTTTTAACTCAAATATTCATAGCGTCTCCAGATATTTTGGATAATGTTGTTCC
ATTTGATCTTAGAACTGTACAAGGTTATAAAAAAGGATCTGTTATTTATTTAGTATTAATTTTCATAGGTTATGGTATAT
TTTTGGTATTTGAAGGAGTCATATGA

Upstream 100 bases:

>100_bases
CATTTCGTCGTTGGGACAAAATACCTAATGATGAACTCAAAGGATATTCAATTTATATTTTTTTGGTAGTTTATTGATTG
GTTGTTTATTATTTGGTTTA

Downstream 100 bases:

>100_bases
TTAAATTAAACTCTTTCTATTCTGTATTTTAAAAAAGAAAAGGAATACTATGAATAATTCATAGTATTATTTTGTACCGT
ATACTCTGTCACCAGCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKVLFKWSFNELIMILLANSVFSFLFSMVIYKREWIDEKYGLGYDGYYIVPGRNEGMSYKAAIVLITTAAPLFSILFFVM
GLHYGNIIVATAFLIAMPIPFILMFLRIDAYENKIIVTPKQLDYCPPFYFMLGQLNAMAGLEFSIRTILISLIYGTYPLI
WAILYFLFSFLTQIFIASPDILDNVVPFDLRTVQGYKKGSVIYLVLIFIGYGIFLVFEGVI

Sequences:

>Translated_221_residues
MKVLFKWSFNELIMILLANSVFSFLFSMVIYKREWIDEKYGLGYDGYYIVPGRNEGMSYKAAIVLITTAAPLFSILFFVM
GLHYGNIIVATAFLIAMPIPFILMFLRIDAYENKIIVTPKQLDYCPPFYFMLGQLNAMAGLEFSIRTILISLIYGTYPLI
WAILYFLFSFLTQIFIASPDILDNVVPFDLRTVQGYKKGSVIYLVLIFIGYGIFLVFEGVI
>Mature_221_residues
MKVLFKWSFNELIMILLANSVFSFLFSMVIYKREWIDEKYGLGYDGYYIVPGRNEGMSYKAAIVLITTAAPLFSILFFVM
GLHYGNIIVATAFLIAMPIPFILMFLRIDAYENKIIVTPKQLDYCPPFYFMLGQLNAMAGLEFSIRTILISLIYGTYPLI
WAILYFLFSFLTQIFIASPDILDNVVPFDLRTVQGYKKGSVIYLVLIFIGYGIFLVFEGVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25370; Mature: 25370

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLFKWSFNELIMILLANSVFSFLFSMVIYKREWIDEKYGLGYDGYYIVPGRNEGMSYK
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEE
AAIVLITTAAPLFSILFFVMGLHYGNIIVATAFLIAMPIPFILMFLRIDAYENKIIVTPK
EEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
QLDYCPPFYFMLGQLNAMAGLEFSIRTILISLIYGTYPLIWAILYFLFSFLTQIFIASPD
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ILDNVVPFDLRTVQGYKKGSVIYLVLIFIGYGIFLVFEGVI
HHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVLFKWSFNELIMILLANSVFSFLFSMVIYKREWIDEKYGLGYDGYYIVPGRNEGMSYK
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEE
AAIVLITTAAPLFSILFFVMGLHYGNIIVATAFLIAMPIPFILMFLRIDAYENKIIVTPK
EEEEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
QLDYCPPFYFMLGQLNAMAGLEFSIRTILISLIYGTYPLIWAILYFLFSFLTQIFIASPD
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ILDNVVPFDLRTVQGYKKGSVIYLVLIFIGYGIFLVFEGVI
HHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA