Definition Methanobrevibacter smithii ATCC 35061 chromosome, complete genome.
Accession NC_009515
Length 1,853,160

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The map label for this gene is 148642460

Identifier: 148642460

GI number: 148642460

Start: 381932

End: 382558

Strand: Reverse

Name: 148642460

Synonym: Msm_0400

Alternate gene names: NA

Gene position: 382558-381932 (Counterclockwise)

Preceding gene: 148642461

Following gene: 148642459

Centisome position: 20.64

GC content: 28.39

Gene sequence:

>627_bases
ATGAGTTCTTTGGAGAGTAAATATTTAGATTCTGTGGGTAATTTTACTAATGGAGTTATACAAGGAATAAATGAGATTAA
AGAAACAAGTAATAATATCACTAATGAAATTAATAGTATTGGTTTTGATTGGGAAGATTTTATTATATCCACAGCAATAG
GATTTGTAGGTAGTGAAATAATTTCTATAGGTGCGATATTGCTTTTTGCAGGTGTAATATTGAGTTCTCCTGAATTAGCA
TGTTTAGCTATAGCTATAGCAGGTATTGGTGAATGTATATTGGCTTATGCAGATGGTTTGTTTGATGATGATGCGTCATC
TGTTGATTATGCTTTTTTTGTATTTGATTCGGTTATGGCTTGGTGTTTACCTTTTGTTGGTGGAGATATTAAATTAGGTG
AAAATATTATTAGATATGCTATTAAAAAAGTGGATGTTTATTATGTGTGTAAACCTATTTTTCAAAGTGTTTGCGTAACC
TTTGAAAAGAAATTTATTCAATTTGGAGTTAAAGACTTAATTTTGAAAAATTTATATGATGTGCAGTTTATAGAAAAAAT
TAAGGATGTTGCTAAATGGGACGTTTTTCCAAGTTTTGTACATGAAATTATTAATGATAATTCATAA

Upstream 100 bases:

>100_bases
TTCGAGATGCTATGCTTTCTGATAGTTTGATTTGTGCTATGCCTTGTTATCATGATAATATAACTGAAGATGCGAGGAAT
ATGGTTATAATTTATTAAAT

Downstream 100 bases:

>100_bases
AAATGAATGAGGAGTGTTATTTTGAAAAATATTTTTAGATTTGCATTTCGTCGTTGGGACAAAATACCTAATGATGAACT
CAAAGGATATTCAATTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSSLESKYLDSVGNFTNGVIQGINEIKETSNNITNEINSIGFDWEDFIISTAIGFVGSEIISIGAILLFAGVILSSPELA
CLAIAIAGIGECILAYADGLFDDDASSVDYAFFVFDSVMAWCLPFVGGDIKLGENIIRYAIKKVDVYYVCKPIFQSVCVT
FEKKFIQFGVKDLILKNLYDVQFIEKIKDVAKWDVFPSFVHEIINDNS

Sequences:

>Translated_208_residues
MSSLESKYLDSVGNFTNGVIQGINEIKETSNNITNEINSIGFDWEDFIISTAIGFVGSEIISIGAILLFAGVILSSPELA
CLAIAIAGIGECILAYADGLFDDDASSVDYAFFVFDSVMAWCLPFVGGDIKLGENIIRYAIKKVDVYYVCKPIFQSVCVT
FEKKFIQFGVKDLILKNLYDVQFIEKIKDVAKWDVFPSFVHEIINDNS
>Mature_207_residues
SSLESKYLDSVGNFTNGVIQGINEIKETSNNITNEINSIGFDWEDFIISTAIGFVGSEIISIGAILLFAGVILSSPELAC
LAIAIAGIGECILAYADGLFDDDASSVDYAFFVFDSVMAWCLPFVGGDIKLGENIIRYAIKKVDVYYVCKPIFQSVCVTF
EKKFIQFGVKDLILKNLYDVQFIEKIKDVAKWDVFPSFVHEIINDNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22993; Mature: 22861

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLESKYLDSVGNFTNGVIQGINEIKETSNNITNEINSIGFDWEDFIISTAIGFVGSEI
CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ISIGAILLFAGVILSSPELACLAIAIAGIGECILAYADGLFDDDASSVDYAFFVFDSVMA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
WCLPFVGGDIKLGENIIRYAIKKVDVYYVCKPIFQSVCVTFEKKFIQFGVKDLILKNLYD
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQFIEKIKDVAKWDVFPSFVHEIINDNS
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSLESKYLDSVGNFTNGVIQGINEIKETSNNITNEINSIGFDWEDFIISTAIGFVGSEI
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ISIGAILLFAGVILSSPELACLAIAIAGIGECILAYADGLFDDDASSVDYAFFVFDSVMA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
WCLPFVGGDIKLGENIIRYAIKKVDVYYVCKPIFQSVCVTFEKKFIQFGVKDLILKNLYD
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQFIEKIKDVAKWDVFPSFVHEIINDNS
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA