| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is iorA [H]
Identifier: 148642452
GI number: 148642452
Start: 372271
End: 374169
Strand: Reverse
Name: iorA [H]
Synonym: Msm_0392
Alternate gene names: 148642452
Gene position: 374169-372271 (Counterclockwise)
Preceding gene: 148642459
Following gene: 148642451
Centisome position: 20.19
GC content: 34.97
Gene sequence:
>1899_bases ATGAACTTAAAAGAATTAGTAACAGGGAAACCTGGTGATAAACAATTTTTGTTAGGTAATGAGGCAGCTGTAAGGGGAGT TATAGAAGCTGGTGTTTCTGTTGCAGCTACTTATCCAGGTACTCCTTCATCAGAAATTGGAAATGTTTTATCCGGATTGG CTAAGGAAGCTAACATTTATTTTGAGTTTTCTACAAATGAAAAAGTAGCTATGGAAGTTGCAGCTACTGCTGCGGCATCT GGACTGCGTTCATTTACTTTCATGAAACATGTGGGTATGAATGTAGCCAGTGATTCATTTATGACAACTGCTTACAGTGG AGTAAATGGTGGTATGGTTATTTTATCTGCAGATGACCCGTCACTTTTTTCATCTCAAAATGAACAGGATACCCGTAATT ACGGACGTTTAGCAAATGTGCCTATTTTAGAACCTTCTAATTGTCAGGAAGTTAAAGACATGGTTAAATATGCTTTTGAT TTATCTGAACAATTTAAATTGCCAGTTATTGTAAGAACAACCACTCGTGTATCTCATATGAGGGGTGTTGTTGAATTTGG TGAGGTGGTAGATAATTCTTCAGAAGGTGAAAGCCATTGGAAAAAAGGATTTTTCAAGAAAAACCCTGCACAGTTTGTTC CGGTTCCGGCATTTGCAAAGGATATGCATGTTGCATTAGTGGAAAAAATGGATGAAATTAATAAAATAACCAACGAGTCA GATTTCAATGTTGAATCCTATTTCAGCCAGAATAAAAAATATGGTGTCATTGCTTCAAGCAGTGCTTATAATTATGCTTA TGATGTAATCAGATATAATAATCTGGACATTGATGTTTTAAAACTTGGATTTTCATATCCTTTCCCTTATGATAAGGTAG CTGATTTTGTAAAGGATTATGATGAAGTCTTTATTGTAGAAGAGGTAGATCCGATTATAGAAAAGGATACATTGGTAGCT ATTGGTAAAAATAATTTAAATACTGTTGTTCATGGTAAATTAGATGGAACCTTCCCAGTATATCATGAATTTAATTCAGA TATTGTAGCTAATGGTTTCAATAAATATTTAAACTTCATTGAAGAAAATACCGATGATTATTCTGATAATTTACTTAATT TACAAGAAGAAATTCCTTCCAGAGCTCCGGTACTTTGTGCGGGATGCCCTCACAGAGCAATGTATTATGGAGTAAATAAA GCATTGGAGGAATTGGGAATTCCTCTTAAAGATGCTGTATTTGCATCAGATATCGGATGTTACACTTTAGGAATAAATCC ACCATATAATGCTGCGGATTACTTGTTGTCTATGGGATCAAGTGTAGGAGACGGCTGCGGATTTTCAATAGCTACAAATC AGAAAGTAATAAGTTTCATTGGTGACTCAACATTTTTCCATAGCGGAATATCACCTTTGATAAATGCAGTTCACAATAAA AACAATTTTATTTTAACTGTATTGGATAATAGGATTACAGCTATGACTGGAGGTCAGCCAAACCCTGGAATTCCTGTTGA TGGAATGGGTGATGATGCACCGGAAATTTCCATACGTAAACTGGCTTTAGCCTGTGGCTGCAATTATGTTCGTGTAATTA ATCCGTTAAACTTGGATCAGGTAGTTAAAACATATAAAGAAGCTTTAGAACGTGATGAAGTTTGTGTGATTATAGCTAAA GCTCCATGTACTTTAATTAAAGGTAAAACTAGGAAACCACCAGTAAATTATATTGATTCCAATTGTAATGGATGTAATAA ATGTGTAAGTGAACTTGCATGTCCTGCTATTTCAAAAGATGGTGGAAAAATAGCTATTGATCAGTCTATGTGTGATGGAT GTGGTGTATGTATCCAAGTTTGTAAATATGGTGCCTTAGAAGCTGGAAGAGGTGAATAA
Upstream 100 bases:
>100_bases CTCATAATCAAATATAAAATAAGTATAATATTTATATTATATCTAAACCTATTATATTATATATTTTATTAGATTTTTAA ATTATTTGAGGAAATAAATA
Downstream 100 bases:
>100_bases ATATGAATAATCATTATAATATTTATATTTGCGGTGTTGGAGGTCAAGGAATTATTAAAACCTCTGTAATTATTGGAGAA GCTGCAATGAACCAAGGATT
Product: indolepyruvate ferredoxin oxidoreductase, alpha subunit
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MNLKELVTGKPGDKQFLLGNEAAVRGVIEAGVSVAATYPGTPSSEIGNVLSGLAKEANIYFEFSTNEKVAMEVAATAAAS GLRSFTFMKHVGMNVASDSFMTTAYSGVNGGMVILSADDPSLFSSQNEQDTRNYGRLANVPILEPSNCQEVKDMVKYAFD LSEQFKLPVIVRTTTRVSHMRGVVEFGEVVDNSSEGESHWKKGFFKKNPAQFVPVPAFAKDMHVALVEKMDEINKITNES DFNVESYFSQNKKYGVIASSSAYNYAYDVIRYNNLDIDVLKLGFSYPFPYDKVADFVKDYDEVFIVEEVDPIIEKDTLVA IGKNNLNTVVHGKLDGTFPVYHEFNSDIVANGFNKYLNFIEENTDDYSDNLLNLQEEIPSRAPVLCAGCPHRAMYYGVNK ALEELGIPLKDAVFASDIGCYTLGINPPYNAADYLLSMGSSVGDGCGFSIATNQKVISFIGDSTFFHSGISPLINAVHNK NNFILTVLDNRITAMTGGQPNPGIPVDGMGDDAPEISIRKLALACGCNYVRVINPLNLDQVVKTYKEALERDEVCVIIAK APCTLIKGKTRKPPVNYIDSNCNGCNKCVSELACPAISKDGGKIAIDQSMCDGCGVCIQVCKYGALEAGRGE
Sequences:
>Translated_632_residues MNLKELVTGKPGDKQFLLGNEAAVRGVIEAGVSVAATYPGTPSSEIGNVLSGLAKEANIYFEFSTNEKVAMEVAATAAAS GLRSFTFMKHVGMNVASDSFMTTAYSGVNGGMVILSADDPSLFSSQNEQDTRNYGRLANVPILEPSNCQEVKDMVKYAFD LSEQFKLPVIVRTTTRVSHMRGVVEFGEVVDNSSEGESHWKKGFFKKNPAQFVPVPAFAKDMHVALVEKMDEINKITNES DFNVESYFSQNKKYGVIASSSAYNYAYDVIRYNNLDIDVLKLGFSYPFPYDKVADFVKDYDEVFIVEEVDPIIEKDTLVA IGKNNLNTVVHGKLDGTFPVYHEFNSDIVANGFNKYLNFIEENTDDYSDNLLNLQEEIPSRAPVLCAGCPHRAMYYGVNK ALEELGIPLKDAVFASDIGCYTLGINPPYNAADYLLSMGSSVGDGCGFSIATNQKVISFIGDSTFFHSGISPLINAVHNK NNFILTVLDNRITAMTGGQPNPGIPVDGMGDDAPEISIRKLALACGCNYVRVINPLNLDQVVKTYKEALERDEVCVIIAK APCTLIKGKTRKPPVNYIDSNCNGCNKCVSELACPAISKDGGKIAIDQSMCDGCGVCIQVCKYGALEAGRGE >Mature_632_residues MNLKELVTGKPGDKQFLLGNEAAVRGVIEAGVSVAATYPGTPSSEIGNVLSGLAKEANIYFEFSTNEKVAMEVAATAAAS GLRSFTFMKHVGMNVASDSFMTTAYSGVNGGMVILSADDPSLFSSQNEQDTRNYGRLANVPILEPSNCQEVKDMVKYAFD LSEQFKLPVIVRTTTRVSHMRGVVEFGEVVDNSSEGESHWKKGFFKKNPAQFVPVPAFAKDMHVALVEKMDEINKITNES DFNVESYFSQNKKYGVIASSSAYNYAYDVIRYNNLDIDVLKLGFSYPFPYDKVADFVKDYDEVFIVEEVDPIIEKDTLVA IGKNNLNTVVHGKLDGTFPVYHEFNSDIVANGFNKYLNFIEENTDDYSDNLLNLQEEIPSRAPVLCAGCPHRAMYYGVNK ALEELGIPLKDAVFASDIGCYTLGINPPYNAADYLLSMGSSVGDGCGFSIATNQKVISFIGDSTFFHSGISPLINAVHNK NNFILTVLDNRITAMTGGQPNPGIPVDGMGDDAPEISIRKLALACGCNYVRVINPLNLDQVVKTYKEALERDEVCVIIAK APCTLIKGKTRKPPVNYIDSNCNGCNKCVSELACPAISKDGGKIAIDQSMCDGCGVCIQVCKYGALEAGRGE
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 68792; Mature: 68792
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKELVTGKPGDKQFLLGNEAAVRGVIEAGVSVAATYPGTPSSEIGNVLSGLAKEANIY CCHHHHHCCCCCCCEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCEEE FEFSTNEKVAMEVAATAAASGLRSFTFMKHVGMNVASDSFMTTAYSGVNGGMVILSADDP EEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCCCEEEEECCCC SLFSSQNEQDTRNYGRLANVPILEPSNCQEVKDMVKYAFDLSEQFKLPVIVRTTTRVSHM HHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCEEEEEHHHHHHH RGVVEFGEVVDNSSEGESHWKKGFFKKNPAQFVPVPAFAKDMHVALVEKMDEINKITNES HHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCC DFNVESYFSQNKKYGVIASSSAYNYAYDVIRYNNLDIDVLKLGFSYPFPYDKVADFVKDY CCCHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCH DEVFIVEEVDPIIEKDTLVAIGKNNLNTVVHGKLDGTFPVYHEFNSDIVANGFNKYLNFI HHEEEEECCCCHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHH EENTDDYSDNLLNLQEEIPSRAPVLCAGCPHRAMYYGVNKALEELGIPLKDAVFASDIGC HCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCE YTLGINPPYNAADYLLSMGSSVGDGCGFSIATNQKVISFIGDSTFFHSGISPLINAVHNK EEECCCCCCCHHHHHHHCCCCCCCCCCEEEECCCHHHHHHCCCHHHHCCHHHHHHHHHCC NNFILTVLDNRITAMTGGQPNPGIPVDGMGDDAPEISIRKLALACGCNYVRVINPLNLDQ CCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHH VVKTYKEALERDEVCVIIAKAPCTLIKGKTRKPPVNYIDSNCNGCNKCVSELACPAISKD HHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC GGKIAIDQSMCDGCGVCIQVCKYGALEAGRGE CCEEEECHHHCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNLKELVTGKPGDKQFLLGNEAAVRGVIEAGVSVAATYPGTPSSEIGNVLSGLAKEANIY CCHHHHHCCCCCCCEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCEEE FEFSTNEKVAMEVAATAAASGLRSFTFMKHVGMNVASDSFMTTAYSGVNGGMVILSADDP EEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCCCEEEEECCCC SLFSSQNEQDTRNYGRLANVPILEPSNCQEVKDMVKYAFDLSEQFKLPVIVRTTTRVSHM HHHCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCEEEEEHHHHHHH RGVVEFGEVVDNSSEGESHWKKGFFKKNPAQFVPVPAFAKDMHVALVEKMDEINKITNES HHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCC DFNVESYFSQNKKYGVIASSSAYNYAYDVIRYNNLDIDVLKLGFSYPFPYDKVADFVKDY CCCHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHCH DEVFIVEEVDPIIEKDTLVAIGKNNLNTVVHGKLDGTFPVYHEFNSDIVANGFNKYLNFI HHEEEEECCCCHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHH EENTDDYSDNLLNLQEEIPSRAPVLCAGCPHRAMYYGVNKALEELGIPLKDAVFASDIGC HCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCE YTLGINPPYNAADYLLSMGSSVGDGCGFSIATNQKVISFIGDSTFFHSGISPLINAVHNK EEECCCCCCCHHHHHHHCCCCCCCCCCEEEECCCHHHHHHCCCHHHHCCHHHHHHHHHCC NNFILTVLDNRITAMTGGQPNPGIPVDGMGDDAPEISIRKLALACGCNYVRVINPLNLDQ CCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHH VVKTYKEALERDEVCVIIAKAPCTLIKGKTRKPPVNYIDSNCNGCNKCVSELACPAISKD HHHHHHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC GGKIAIDQSMCDGCGVCIQVCKYGALEAGRGE CCEEEECHHHCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9108258 [H]