| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148642319
Identifier: 148642319
GI number: 148642319
Start: 242029
End: 242538
Strand: Reverse
Name: 148642319
Synonym: Msm_0259
Alternate gene names: NA
Gene position: 242538-242029 (Counterclockwise)
Preceding gene: 148642320
Following gene: 148642318
Centisome position: 13.09
GC content: 27.06
Gene sequence:
>510_bases ATGAAATATTGTCCTAAATGCGGTTTTGAAAATGCTAATTATGCCAAATTTTGTGTAAAATGTGGCAATTCTTTTGTTGA CATGGACATTAATACAATTAAAAAACATAATTCAATTATGAATTCCATGCATTCAAAAGAAACAAGTGAAATTTCACAAA AGAAAAAGGTTAATAATACATTTAATGAATCACATTTTAAAGATAATGGGCATACTAAACCAACTTTTAAATTCAAATTG TTTCATATATTTGATGAGAGAAAAAATAAATACAGGATTAGCAAATTAAGAGTAATTTTAGCAATGGAAGCTGCTTTCTT TTTTGCAGTTTCTGTTTATATTTCCTTATTTGTAGATTCTGAATTTTTTTCAAGTGAATTTGCGGTTAATCCTGTTGTTG CGATTTTGCTGTTGATTTGTGCAAGTATAGTTATAGCAGGAATATTCGTAATTCCTACAGGGATTATAGGATGGATTTTA AGAAGAATTTATCTTTACTTGACTAAATGA
Upstream 100 bases:
>100_bases GGCCATGAATGTGCCGGATCTATAAAATACATTGAAGGTTTAGGGGAAGAAGTTTTAAGTGAATTTGTTAATGAAATAAG AAATATGAGTGAACTTTAAA
Downstream 100 bases:
>100_bases TGATGCATATGGTTTTACAAAACTACTGTGGCAATTGCGGCAAAAGATTATCACTTAATGAAGAGTACTGTAAAGGCTGT GGAGCTAGAACAGCTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKYCPKCGFENANYAKFCVKCGNSFVDMDINTIKKHNSIMNSMHSKETSEISQKKKVNNTFNESHFKDNGHTKPTFKFKL FHIFDERKNKYRISKLRVILAMEAAFFFAVSVYISLFVDSEFFSSEFAVNPVVAILLLICASIVIAGIFVIPTGIIGWIL RRIYLYLTK
Sequences:
>Translated_169_residues MKYCPKCGFENANYAKFCVKCGNSFVDMDINTIKKHNSIMNSMHSKETSEISQKKKVNNTFNESHFKDNGHTKPTFKFKL FHIFDERKNKYRISKLRVILAMEAAFFFAVSVYISLFVDSEFFSSEFAVNPVVAILLLICASIVIAGIFVIPTGIIGWIL RRIYLYLTK >Mature_169_residues MKYCPKCGFENANYAKFCVKCGNSFVDMDINTIKKHNSIMNSMHSKETSEISQKKKVNNTFNESHFKDNGHTKPTFKFKL FHIFDERKNKYRISKLRVILAMEAAFFFAVSVYISLFVDSEFFSSEFAVNPVVAILLLICASIVIAGIFVIPTGIIGWIL RRIYLYLTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19463; Mature: 19463
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYCPKCGFENANYAKFCVKCGNSFVDMDINTIKKHNSIMNSMHSKETSEISQKKKVNNT CCCCCCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FNESHFKDNGHTKPTFKFKLFHIFDERKNKYRISKLRVILAMEAAFFFAVSVYISLFVDS CCHHCCCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EFFSSEFAVNPVVAILLLICASIVIAGIFVIPTGIIGWILRRIYLYLTK HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKYCPKCGFENANYAKFCVKCGNSFVDMDINTIKKHNSIMNSMHSKETSEISQKKKVNNT CCCCCCCCCCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FNESHFKDNGHTKPTFKFKLFHIFDERKNKYRISKLRVILAMEAAFFFAVSVYISLFVDS CCHHCCCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EFFSSEFAVNPVVAILLLICASIVIAGIFVIPTGIIGWILRRIYLYLTK HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA